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LOCUS XM_017153532 1842 bp mRNA linear INV 09-DEC-2024 (LOC108065526), mRNA. ACCESSION XM_017153532 VERSION XM_017153532.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017153532.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1842 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1842 /gene="LOC108065526" /note="uncharacterized LOC108065526; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065526" CDS 77..1525 /gene="LOC108065526" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017009021.2" /db_xref="GeneID:108065526" /translation="MSAGSVEPLAHSQTPLDALCRVCHTSSPRCLPLFKPLNHLISGK LSTLASILSYCSGLEILETELFLPHHICPGCVAKLRLALEFKRSVHRMDRLLRQSHAD FCRSKRINELGIEAKMSPGITEDLVFVIDDQEVAEEPLEAIPNEEEHLVVEEVRVEKR EMEPSLQEQIPEMMNQEEQLLLEAKAAEDLYEIVEEPEQPVVEALDSKMRSGKTLITK RTTFEYHIALENKPQKRAQRTKESLQDLYEIVEEPEQPQKSSARRSGQWKAQNPSLQC QICGKQLSTSNSFKYHMQLHGTATPYVCRICGESFKTRNAHDGHVTLHDLNNPNRCPT CFKVYRQASSLRTHLLIHSGIKPFECNICGKRLTQKSGYKKHMLTHTGEKPHGCDICG RSFRYSSNLIAHKRSHSQEKPHHCQVCQKRSFGSRSELNRHMLVHSSERPFGCEECGK SFKRQVSLSIHLQSHKEGRRRKKINRKVEEDT" misc_feature 131..373 /gene="LOC108065526" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature <866..1375 /gene="LOC108065526" /note="FOG: Zn-finger [General function prediction only]; Region: COG5048" /db_xref="CDD:227381" misc_feature 902..964 /gene="LOC108065526" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1070..1132 /gene="LOC108065526" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1085..1087,1091..1093,1097..1099,1103..1108, 1115..1120,1127..1129,1169..1171,1175..1177,1187..1192, 1199..1204,1211..1213,1253..1255,1259..1261,1265..1267, 1271..1276,1283..1288,1295..1297) /gene="LOC108065526" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1154..1216 /gene="LOC108065526" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1238..1300 /gene="LOC108065526" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1322..1387 /gene="LOC108065526" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1361..1438 /gene="LOC108065526" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 1409..1471 /gene="LOC108065526" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 1842 /gene="LOC108065526" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacaaacct gagtttagga cgccaaagtt agttgctaat ttgttaatcg ccactgaagt 61 ctaaccaaag gccaccatgt cggctggatc ggtggagccg ttggcccata gccaaacgcc 121 cctggacgcc ctgtgtcgcg tttgccacac ttcatccccg cgctgtttgc cgctcttcaa 181 gccactgaat cacctgattt ccgggaaact atccaccctg gccagcatcc tgagctactg 241 cagcggcctg gagatcctgg agacggagct cttcctgccc caccacatct gcccgggctg 301 cgtggccaag ctgcggctcg cgctggaatt caagcggagt gtccaccgaa tggacaggct 361 gctgaggcaa agtcatgcgg acttttgccg ctccaagagg atcaatgagc tgggaatcga 421 agctaagatg tcgccgggca tcaccgagga cctcgtcttt gtgatcgatg accaggaggt 481 ggcagaagag cccttagaag ccattccaaa tgaagaggag cacctggttg tagaagaagt 541 tcgggtggaa aagcgggaga tggagccaag tttgcaggaa caaatccctg agatgatgaa 601 ccaagaggag cagctcctct tggaggccaa agctgctgaa gatctctacg agattgtgga 661 ggagccggag cagcctgtag tagaagccct ggactccaaa atgaggtcag gaaaaacgtt 721 gatcaccaaa agaaccacct ttgagtacca catagcgctc gaaaacaagc cacaaaaaag 781 agctcagaga actaaagaat cactccaaga tctctacgag attgtggagg agccagagca 841 accacagaag tcctcggcca ggagaagtgg tcaatggaaa gcgcagaacc cctcgttgca 901 gtgtcagatt tgcggcaagc agctcagcac cagcaactcg ttcaagtacc acatgcagct 961 ccatggcacg gccacgccct acgtttgccg catctgcggc gagtccttca agacgcgcaa 1021 tgcccacgac ggtcatgtga cgctgcacga tctgaacaat ccgaataggt gccccacctg 1081 cttcaaggtc taccggcagg cctcgtcgct ccgcacccat ctgctgatcc acagcggcat 1141 caagcccttc gagtgcaaca tctgcggcaa gcggctgacc cagaagtccg gctacaagaa 1201 gcacatgctc acgcacacgg gcgagaagcc gcatggatgc gacatctgcg gccgcagctt 1261 ccgctactcg agcaacctga ttgcccacaa gcgcagccac agccaggaga agccgcacca 1321 ctgccaggtg tgccagaagc ggagcttcgg cagccgctcc gagctgaatc gccacatgct 1381 cgtgcacagc agcgagcgac cgttcggctg tgaggagtgc ggcaagtcct tcaagcggca 1441 ggtttccctc agcatccatc tgcagtcgca taaggaaggt cgcaggcgga agaaaataaa 1501 tcggaaggtg gaggaagata cctgattgca ggcatagatt agagcccaag aatctcttta 1561 cttctagtta atattctcat ttatatatac attagagccc tgcgttaatc gttcgatttt 1621 tgttttatca tagtatgcca tgaagtttct gatttgttta attcaattgt gaaataaatt 1681 gaatgttttt caaattcctt tcaaattgaa tgaatgaatg aataattttt atgaatttga 1741 aatttttttg tgctttcttt tgagaataaa aagtgaaaca tttttaacaa atcaatgtta 1801 aaacgtttag aaaataaaat taatgcagat ttaatcacaa aa