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PREDICTED: Drosophila takahashii deadhead (dhd), mRNA.


LOCUS       XM_017153523             870 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017153523
VERSION     XM_017153523.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017153523.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..870
                     /gene="dhd"
                     /note="deadhead; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108065517"
     CDS             106..429
                     /gene="dhd"
                     /codon_start=1
                     /product="thioredoxin-1"
                     /protein_id="XP_017009012.1"
                     /db_xref="GeneID:108065517"
                     /translation="MASVRTMNDYHKRIEAADDKLIVLDFYAQWCGPCKDMESTVKSL
                     ARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLKNNRRVAAFSGADEHKLTNMMA
                     KLVKA"
     misc_feature    121..420
                     /gene="dhd"
                     /note="Chaperedoxin CnoX, contains thioredoxin-like and
                     TPR-like domains, YbbN/TrxSC family [Posttranslational
                     modification, protein turnover, chaperones]; Region: CnoX;
                     COG3118"
                     /db_xref="CDD:442352"
     polyA_site      870
                     /gene="dhd"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctccagttca gaattcgcca caaaagggtt accacctagc cagcaaaaaa aaaagctttt
       61 taaattacca ccttaaaacc cgtaatcttc agcaaatccg tgaaaatggc ttctgtccgc
      121 accatgaacg actatcacaa gagaatcgag gcggccgacg acaagctgat tgtcctcgac
      181 ttctacgccc agtggtgcgg accctgcaag gatatggaga gcacggtgaa atcgctggcc
      241 aggaagtact catccaaggc cgtcgtcctc aagatcgatg tggacaagtt cgaggagctg
      301 acggagcgct acaaggtgcg cagcatgccg accttcgtct tcctcaagaa caatcgtcgc
      361 gtggccgcat tttccggcgc ggatgagcac aagctgacca acatgatggc caagctggta
      421 aaggcctaga aaaatcgaaa tcgacatcga aatcatcgtt cggagccggg ctccaccacc
      481 actacctata gattatggat tttaacccat gttcaaagtg ttccttttgt aatcgtctta
      541 actcaactat tattaatgta tgtatgatgt atagctcgta agcgatgtgg gagtaggaga
      601 tgcgcgtgtg gtcataaaaa gcagaaacta actagaaatc aggagtgaaa agacccaaaa
      661 atgtgaaagg tgaaaaaaaa acctaacctc aatcatgata tgtatgtttt agtgcgtgga
      721 ggcgtgtctg cgacataacc tcttaagtct gagaattgta ttctgtttaa tcaaaaaatc
      781 aactcgaaat gccattttgg acaaagaaat tagctttaag gttaggcact tagcaattcg
      841 atcaataaat tgtaaccact ctgactataa