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LOCUS XM_017151616 3459 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_017151616 VERSION XM_017151616.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151616.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3459 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3459 /gene="Fim" /note="plastin-2 Fim; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108064199" CDS 489..2417 /gene="Fim" /codon_start=1 /product="plastin-1 isoform X2" /protein_id="XP_017007105.1" /db_xref="GeneID:108064199" /translation="MAALNKFTKTLSIDEKAEIKEKFTELDANKDGFIDLHELKDALN QVGFKLAGYQVREMIDEYKGKGKQTAFQGKLNLEEFEALCLDLKSKDVASTFKTVVSK KENLETLGGMSSISSEGTTHSVRLEEQLAFSDWINSNLGHDKDLQHLLPIDSEGKRLY LSIKDGILLCKIINHSCPDTIDERAINKKNLTVYREFENLTLALVSSQAIGCNIVNID AHDLAKGKPHLVLGLLWQIIRIGLFSHITLDSCPGLAGLLFDNERLEDLMKMSPEAIL LRWVNHHLERAGISRRCTNFQSDIVDSEIYSHLLKQIAGNDADVNLDALRESDLQSRA EIMLQQAAKLNCRSFLTPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIEGLESIEET REEKTYRNWMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRK FMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYTLSILSRLA NTGNPIIEKEIVQWVNNRLTDAGKTSQLRNFNDPAIADGKIVIDLIDAIKEGSINYEL VRTSGTQEDNLANAKYAISMARKIGARVYALPEDITEVKPKMVMTVFACMMALDYVPN MDSVDQNNHNSSASNNSN" misc_feature 504..2345 /gene="Fim" /note="Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]; Region: SAC6; COG5069" /db_xref="CDD:227401" misc_feature 798..1232 /gene="Fim" /note="first calponin homology (CH) domain found in the plastin family; Region: CH_PLS_rpt1; cd21292" /db_xref="CDD:409141" misc_feature order(870..872,882..884,1071..1073,1077..1082,1089..1094, 1098..1100,1125..1151,1164..1166,1170..1175,1179..1184, 1191..1196,1203..1205) /gene="Fim" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409141" misc_feature 1653..2000 /gene="Fim" /note="third calponin homology (CH) domain found in the plastin family; Region: CH_PLS_rpt3; cd21298" /db_xref="CDD:409147" misc_feature order(1668..1670,1680..1682,1845..1847,1851..1856, 1863..1868,1872..1874,1899..1925,1938..1940,1944..1949, 1953..1958,1965..1970,1977..1979) /gene="Fim" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409147" polyA_site 3459 /gene="Fim" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cattgttgtt ttgttcaccc acttcgtcgc gtcgcttaac caaattgcca aattgttaac 61 aaaatcgcct cgcacgcaca gtagccggtc gaattcgaac ttggacgctc tgaactgcgc 121 tcgccaatga aacgcaagtg aaacgcggct ggagttgtaa ataaacaagg gatttttttt 181 ttggtaagaa agccagtaac aaacgaaatc acgaaagtgt gtgggtgcaa aattaagaaa 241 taatcagcgg aaattaggaa aattcgtact caaaaacgca caaatacaca gatacatata 301 ggaaaaggag cgcgcggtaa aacaaaaaaa aaaaaaaacg aagaggagaa taagaaagga 361 gacggaaaac gccgactgcg aaaacggcga caaagtgaaa ttgataataa acgcataatt 421 tatttaaaat aataaccaat cagcgacggc agttataaat aattaagaaa gtcaagaaga 481 aaagcgaaat ggcggcacta aacaaattca caaaaacgct gtccattgat gaaaaggccg 541 agatcaagga gaaattcaca gagttggacg ccaacaagga tggcttcatc gacctgcacg 601 agctgaagga tgcgctcaac caggtgggct tcaagctggc cggctaccag gtgcgcgaga 661 tgattgatga gtacaagggc aagggcaaac agaccgcctt ccagggcaag ctcaatctgg 721 aggagttcga ggctctgtgc ctcgatctca agagcaagga tgtggccagc accttcaaga 781 cggtcgtctc gaagaaggag aacctggaga ccctgggcgg catgtcgagc atctcgtccg 841 agggcaccac ccattcggtg cggctcgagg agcagctggc cttctccgac tggatcaact 901 cgaatctggg ccacgacaag gacctgcagc acctgctgcc catcgacagc gagggcaagc 961 ggctgtatct gagcatcaag gatggcattc tgctgtgcaa gatcatcaat cactcctgcc 1021 cggacaccat cgacgagcgg gcgatcaaca agaagaacct caccgtctac agggagttcg 1081 agaatctgac cttggccctc gtttcctcgc aggcgattgg ctgcaacatt gtgaacatcg 1141 atgcccacga tctggccaag ggcaagccgc atctggtgct gggcctcctc tggcagatca 1201 tccgcatcgg cctgttcagc cacatcaccc tggacagctg tcccggactc gcgggcctgc 1261 tcttcgacaa cgagcggctc gaggatctga tgaaaatgtc gccggaggcc atcctcctgc 1321 gttgggtcaa ccatcatctg gagcgggcgg gcatctcgag gcggtgcacc aacttccagt 1381 cggacatcgt cgactcggag atctattcgc atctgctgaa gcagattgcc ggcaacgatg 1441 cggacgtcaa tctggatgca ttgcgggaat cggatttgca gtcgcgtgcg gagatcatgt 1501 tgcagcaggc cgccaagctg aactgccgca gcttcctcac gccgcaggat gtcgtcaacg 1561 gggtctacaa actcaatctg gccttcgtgg ccaatctgtt caacaaccat ccgggattgg 1621 acaagcccga gcagatcgag ggactcgagt ccattgagga gacgcgcgag gagaagacct 1681 accgcaactg gatgaactcg atgggcgtgg cgccgcatgt caactggctg tactccgatc 1741 tggccgacgg actggtcatc ttccagctct tcgacgtcat caagccgggc atcgtcaact 1801 ggagccgggt gcacaagcgc ttcagtccgc tgcgcaagtt catggagaag ctggagaact 1861 gcaactacgc ggttgatctg ggcaagcagc tgaagttctc gctggtcgga atcgctggcc 1921 aggatcttaa cgatggcaat gccacgctga cgttggctct catctggcag ctaatgcgcg 1981 cctacaccct gtccattctc tcccgcctgg ccaacaccgg caacccgatc atcgagaagg 2041 agatcgtcca gtgggtgaac aaccggctga cggacgctgg caaaacgtcg cagctgcgca 2101 acttcaatga cccggccata gccgatggca agatcgtgat cgatctgatc gatgccatca 2161 aggagggcag cattaactac gagctggtgc gcaccagcgg cacgcaggag gataacctgg 2221 ccaatgccaa gtatgccatc tccatggccc gcaagatcgg cgcccgcgtc tacgccctgc 2281 ccgaggacat caccgaggtg aagcccaaga tggtgatgac cgtcttcgcc tgcatgatgg 2341 ccctcgacta cgtgcccaat atggacagcg tggaccagaa caaccacaac agctccgcca 2401 gcaacaacag caattaggcg aaatggccac aactcaatta tatataaaca aaaggatgga 2461 attttgaaaa agggggaaaa caggaaatcc ctttcgctaa aaactaacaa ctattcgatt 2521 gcgttccttc ctgcgccaat accaatacat tttctgtgtg tgtgtttttt tttatttcga 2581 ttactttttg taattttttt ttattatata tttatacaat tatatacttg agtacgagta 2641 tatgagttcc cccccaattg taattaagca aacggatttt agagtgtcgc gcatctgttt 2701 tccgagcccg tcgaggggtt tctttattag ttttgtttaa caattgttta attatacaac 2761 tgtaacctta ttttataaat agaggtttgg cttcttccgc tttaaatcct taaaaatgaa 2821 attaggaaac aagagaaggg aaagaaatga aagaaacaaa aaacaagcgg ccgtttagcg 2881 tgcaagatta agagagaatt attaagagaa tattaatatt gcgacgaaaa caatgaaaac 2941 aattaacttt gtaatatata tacatatata tttatatacg attacgatat gcgcctatat 3001 acataacata tatatttaca taaatcgata tatttttgca taaatacatt gcctggagct 3061 gaaaggggag ataacgataa agaatgaaga tcggggaatc ggagatccag aaacaaaata 3121 gatcgtgaga aagcagagta aataattttg tatcttgtat ttaatatata tttttttgca 3181 aataattgta agccgctttt gtttatgttt ttttccaacg cgtgtgtttg ttctatttct 3241 ttttacatat ttgtataatt ttgcgtttaa gtgcgttaga gcgaggtggc aataggcagc 3301 gccaacatgg cgtagaaaga gagggcaaca aacatttttt agtgcaatga ggcgacatac 3361 aaatccaagg aaaaaacgaa ataagaaaaa gatgaagtaa tactatatgc ataatacaag 3421 taaaacaata aagtaaatct taaaaaaaaa atactaaaa