PREDICTED: Drosophila takahashii Tubulin tyrosine ligase-like 1A

LOCUS       XM_017151482            1750 bp    mRNA    linear   INV 09-DEC-2024
            (TTLL1A), transcript variant X2, mRNA.
ACCESSION   XM_017151482
VERSION     XM_017151482.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017151482.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1750
                     /gene="TTLL1A"
                     /note="Tubulin tyrosine ligase-like 1A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:108064119"
     CDS             111..1586
                     /gene="TTLL1A"
                     /codon_start=1
                     /product="polyglutamylase complex subunit TTLL1 isoform
                     X2"
                     /protein_id="XP_017006971.2"
                     /db_xref="GeneID:108064119"
                     /translation="MKGQTSALRNLRQKCGGSCTSDDDLPEVKITNPSPLMGVQFIRS
                     RLRPTKSQKGIYYSTDWEKSALVSNFQKRGWLQVPSFNGEWNFYWACTQNCRYIFGID
                     HPYRMRSDQVINHFPNSVELSRKDLLIKNIKRYRKDLERRGDPLAQSHPPDTKLGVGG
                     TRYKHLDIIPMTFVLPSDYQMFVEVFHRNPASTWIVKPCSKSQGVGIYLVNKLSKLKK
                     YAYDARTFYPQINRDTCVISKYIDNPLLIGGKKFDLRLFVLVTTFNPLKAYLYKEGFC
                     RFCTEKYDHTEIDNVFMHLTNVSIQKTNQEYNSIHGGKWPLQNLWLYLDSLRGEGISE
                     MLWSRITDTIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTT
                     TNDRMLKSRLIDNVLDVVVPPNSLPDEHWDKTPSPELLKNFTVLQPIPASKPPAEELV
                     RRKGRSPRKRKTKSLPAAGSSTPPPAEGESKIRKSTKAVKR"
     misc_feature    426..1352
                     /gene="TTLL1A"
                     /note="Tubulin-tyrosine ligase family; Region: TTL;
                     pfam03133"
                     /db_xref="CDD:397308"
     polyA_site      1750
                     /gene="TTLL1A"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccaaaactag attgtcagca actaaacaac gatcgtctcg aaatcggggg aaaaattctc
       61 agtattatag tgtagagttg gagaccgaga gagaccataa acggcccaaa atgaagggcc
      121 agacgagtgc tttgaggaat cttcgccaga aatgcggcgg cagttgcacc agtgacgatg
      181 acctgccgga ggtgaagata accaatccat cgccactcat gggagtgcag ttcatacgca
      241 gtcgcttgag gccaacgaag tcccagaagg gcatctacta cagcacggac tgggagaaat
      301 cggcgctggt cagtaatttc cagaaaaggg gctggctgca ggtgccgtcc ttcaatggcg
      361 aatggaactt ctactgggcc tgtacccaga attgccgcta cattttcggc atcgatcatc
      421 cgtatcgcat gcgatcggat caagtcatta accactttcc aaactccgtg gagctgtcgc
      481 gcaaggatct gctgatcaag aacatcaagc ggtaccgcaa ggatctggaa cgacgtggcg
      541 atccgctggc ccagagccat ccgccagaca cgaaactcgg agtaggtggg acccggtaca
      601 agcacctgga catcataccc atgacctttg tcctgccctc cgactaccag atgttcgtcg
      661 aggtcttcca tcgcaatccg gcgagcacgt ggatcgtcaa gccgtgcagc aaatcacagg
      721 gcgtgggcat ctatctggtg aacaagctgt ccaagctgaa gaagtacgcc tacgatgcgc
      781 gcaccttcta tccgcagatc aatagggaca cctgcgtcat ctccaagtac atcgacaatc
      841 cgctgctcat cggcggcaag aaattcgatc tgcgactctt cgtcctggtg accaccttca
      901 atccgctgaa ggcgtatctc tacaaggagg gcttctgccg cttctgcacc gagaagtacg
      961 accacaccga gatcgacaat gtctttatgc acctcaccaa tgttagcata caaaaaacga
     1021 accaagagta caactcgatc catggtggca agtggccctt gcagaatctg tggctctatt
     1081 tggacagcct gcggggcgag ggcatttcgg agatgctgtg gagccgcatc accgacacca
     1141 tccgtcactc cctggacgca gtggctccgg tgatggccaa cgatcggcac tgtttcgagg
     1201 tctacggcta tgacatcatc atcgacaata acctgaagcc ctggctgatc gagatcaata
     1261 cgtcgccatc gatgcactcg accaccacga acgatcgcat gctcaagtcg cggctaatag
     1321 acaacgtcct ggacgtggtg gtgccgccaa atagtttgcc agatgagcac tgggacaaga
     1381 cgcccagtcc ggagctcctg aagaacttca ccgtgctgca gcccattccg gcgtcaaagc
     1441 cgccagcgga ggagctcgtg cgacgcaagg gcagatcgcc caggaaaaga aagaccaaat
     1501 ccctcccagc cgccggctca tccactccac cgcccgccga aggagagtcc aagataagaa
     1561 agagcaccaa ggcagtgaag agatgaagct gaagtgtcgt ctgtcgtcag tcgttggttg
     1621 tcatatagaa aatcgaacag ctcgaatggt ttatgaaaat ttgtaacttt taattcgcaa
     1681 ctcggtattc ggtatcgcac aaattactta ggaagtacac aaaattaaag tatcgtatat
     1741 attcgctata