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LOCUS XM_017151469 6767 bp mRNA linear INV 09-DEC-2024 regulator (baz), transcript variant X5, mRNA. ACCESSION XM_017151469 VERSION XM_017151469.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151469.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6767 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6767 /gene="baz" /note="par-3 family cell polarity regulator; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108064086" CDS 987..5465 /gene="baz" /codon_start=1 /product="partitioning defective 3 homolog isoform X4" /protein_id="XP_017006958.2" /db_xref="GeneID:108064086" /translation="MKVTVCFGDVRILVPCGSGELLVSDLVKEATRRYIKAAGKPDSW VTVTHLQTQSGILDPDDCVRDVADDREQILAHFEDPGPDPGVPQGGGDGASGSSSVGT GSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRSSDPNLLASLK AEGSNKRWSAAAPHYAGGDSPERLLLDKAGGQLSPQWEEDDDPGQQLKEQLLQQQQQP HGAGSANNHQPFARSGRLSMQFLGDGNGYKWMEAAEKLQSQPTTAQQMHHHHPSGSSY SSKSLPRESKRKEPLGQAYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQH VEPGSRAERGRLRRDDRILEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGNRSR NSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLGRKIEILLKKGPNGLGFSVTTR DNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAILRGMPA GATVRIVVSRQQELAEQAGQPAAEKSVTAVAAPAPAAIPIPVQKSSSARSLFTQQSQL NESQHFIDAGSESAASNDSLPPSSNNWHSREELTLHIPVHDTEKAGLGVSVKGKTCSN LNASGSSASSGSNGGGGAGGLMKLDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNG VSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASSSDILDHSSSHSHSN SSSGGSNSNGSGHNNNSSSNASDNSGATVIYLSPEKREQRCNGGATGGSAGNEMNRWS NPVLDRLTGGICSSNSAQPSSQQQQPTHPSQQQQQTQQQQQQQRRLPAPPVCSSAALR NESYYMATNDNWSPAQLHLLTGHGNTALLIEDDAEPMSPTLPARPHDGQHCNASSANP SQNLNAAGGSHPVVVVPGTPSTSSNFDATYSSQLSLETNSGVEHFSRDALGRRSISEK HHAALDARETGTYQRNKKLREERERERRIQLTKSAVYGGSIESLTARIASANAQFSGY KHAKTASSIEQRETQQQMAAAAESEARDQLGDLGPSLGMKKSSSLESLQTMVQELQMS DEPRGHQALRAPRGRGREDSLRAAVVSEPDASKPRKTWLLEDGDHEGGFAAQRNGPFQ SSLNDGKHGSKSSRAKKPSILRGIGHMFRFGKNRKDGVVPVDNYAVTISPPTSVVSTA TSPQLQQQQQLQLQQQQQQLQQQQIPTAALAALERNGKPPAYQPPPPLPAPNGVGGSN GIHQNDIFNHRYQHYANYEDLHQQHQQHQISGDESPTSISETLSESTLECMRQQVIRQ RIKVEAESRRHQHYHSQRSARSQDVSMHSTSSGSQPGSLAQPQSQSNGSGVRPMSSYY EYETVQQQRVGSIKHSHSSSATSSSSSPINVPHWKAAAMNGYSPASLNSSARSRGPFV TQVTIREQSHLLQQHHQQQQQQQQLQQQPTYQTVQKMSGASQYGTAAGSQPHASKV" misc_feature 990..1223 /gene="baz" /note="N-terminal of Par3 and HAL proteins; Region: Par3_HAL_N_term; pfam12053" /db_xref="CDD:463446" misc_feature 1890..2150 /gene="baz" /note="PDZ domain 1 and PDZ domain 3 of Drosophila bazooka (DmPar3), and related domains; Region: PDZ1_PDZ3_bazooka-like; cd06665" /db_xref="CDD:467154" misc_feature order(1929..1949,1980..1982,1989..1991,2079..2081, 2091..2093,2100..2105) /gene="baz" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467154" misc_feature 2265..2543 /gene="baz" /note="PDZ domain 2 of partitioning defective 3 (Par3), and related domains; Region: PDZ2_Par3-like; cd23058" /db_xref="CDD:467271" misc_feature order(2310..2330,2373..2375,2382..2384,2472..2474, 2484..2486,2493..2498) /gene="baz" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467271" misc_feature 2772..3143 /gene="baz" /note="PDZ domain 3 of partitioning defective 3 (Par3), and related domains; Region: PDZ3_Par3-like; cd23059" /db_xref="CDD:467272" misc_feature order(2820..2840,2955..2957,2964..2966,3054..3056, 3066..3068,3075..3080) /gene="baz" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467272" polyA_site 6767 /gene="baz" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gttgttgctg ggtttcgggg gttcgaattt cgaatttcgg agcgcataat cgaagcgccg 61 tggatttttt gcattttttt tgagttcaaa tagttcgtta ataagagtgg cggcaaacga 121 cggaattcag ttgcgatcga gatagtatgt agtttaaagt gctaagaaaa gaggagcgac 181 gccagcgggc gaaaaaggag ataaccgaaa acgaaaaaca cgaccaagca acgttgaaag 241 agagtaaaaa aatgatcgaa ccgtaaattc aaatacataa tgcttagtat ataataattt 301 gaccaaaaca aatgccaagt gagagagcga aaaacgctgg aaataagtaa ataagtgatc 361 ttggccgaat cccgttcgtt attgttgttg ttatggctgt tgtaactcgt tttttacttt 421 aatgcgcgcg tgtatgaatc acacaaagac aacaacaaca acaacaacaa caaaacaaac 481 aataacaacg ctgcgatacg gtaaaatatg ctaagtaaat agcgaaagag agttcgagtc 541 cgagagagag agagacaccg aagagcgcgc gaaagaggag aagaccacta cacaagtaca 601 tactggaaaa cgatcctttt tccaggcacg cggccgtctc gctcgcaccc atgccgccct 661 agaccaactt ttgttgcagc tgcctaacaa ccaacaacaa cacacactgg aagtgcacag 721 gagcaacaag gatggcaata gctggaaaac gaccatgatg atgatgcggt cgccacaaaa 781 acaacaacaa caagctgctg caggcagacg agcatagcct aaaaaaaaaa cagagtagta 841 ataggaaaaa ttccgaaaaa tacgaagaaa cgatcgccga attcaataat caagtgcata 901 tgtgtgtgca aaatagaaag tgcattgcat ttcgagagcc gacaaaagat aataatagta 961 gttattgtta atacgaaaag tacgaaatga aggtcaccgt ctgcttcggc gacgttcgca 1021 ttctggttcc ctgcggttcc ggcgaactcc tcgtcagcga tctcgtcaag gaggccacgc 1081 gacgctacat caaggcagcc ggcaagcccg attcctgggt gaccgtgacc catctgcaga 1141 cacagtcggg catcctcgat ccggatgact gtgtgcgcga cgtggccgac gaccgggagc 1201 agatactggc ccacttcgag gacccgggac cggatccggg cgtcccgcag ggcggcggcg 1261 acggtgcgtc gggcagttcg tccgtgggca ccggctcgcc ggacattttc cgcgatccga 1321 ccaacacgga ggcgcccacc tgtccgcgcg atctgtccac gccgcacatc gaggtgacca 1381 gcactacgtc gggtccgatg gccggactag gagtgggcct gatggtccgt cgcagcagtg 1441 atcccaatct gctggcctcc ctgaaggcgg agggcagcaa caagcgctgg tcggcggcgg 1501 ctccccacta cgctggcgga gattcccccg agcgcctgct cctggacaag gccggtggcc 1561 agttgtcgcc ccagtgggag gaggacgacg atcccggcca gcagctaaag gagcagctgc 1621 tccagcagca gcagcagcca catggagcag gatcagccaa caaccaccag ccattcgctc 1681 gatccggccg cctgtccatg cagtttctgg gcgacggcaa tggctacaag tggatggagg 1741 cggccgagaa gctgcagagc cagccgacaa cagcccagca gatgcatcat catcatccct 1801 ctggcagctc ctattccagc aaatcgctgc cccgggagag caagcgcaag gagccgctgg 1861 gccaggcata cgaatccata cgcgagaagg acggcgagat gctgctgatc atcaacgagt 1921 acggcagtcc gctgggactg acggctctgc ccgacaagga gcacggcggc ggactgctgg 1981 tgcagcacgt ggagccgggc agtcgggcgg agaggggacg gctgcgtcgc gatgatcgca 2041 tcctcgagat caacggcatc aagctgatcg gactgactga gtcgcaggtt caggagcagc 2101 tgcgtcgggc cttggagagc tcggagctga gggttcgagt gctgcgcggg aatcggagca 2161 gaaactccaa ggtggccgag atggtggagg tggccacggt gtcgcccacc cggaagccac 2221 atgccgctcc agtcggcacc tccctccagg tggccaacac acgcaagctg ggcagaaaga 2281 ttgagatact gctgaagaag ggacccaatg gactgggctt ctcggtgacg acgcgcgaca 2341 atcccgccgg cggacattgc cccatctaca tcaagaacat cctgccgcgc ggagcagcca 2401 tcgaggatgg tcgcctgaag cctggcgatc gcctgctgga agtggacggc actccgatga 2461 cggggaagac gcaaacggat gtggtggcca ttttgagggg aatgccagcg ggggccactg 2521 tgaggattgt ggtctcgcgg cagcaggagt tggccgagca ggctggccag ccggcggcgg 2581 agaagagtgt gactgcagtt gctgctcccg ctccggctgc cattccaatt cccgtccaga 2641 aatccagcag tgcacgatct ctgtttaccc agcaatcgca gctcaacgaa tctcagcact 2701 ttatcgatgc gggcagcgag tcggcggcct cgaatgacag cctgcccccg agcagcaaca 2761 actggcattc gcgcgaggag ctgacccttc acattcccgt tcacgacacc gaaaaggccg 2821 gactgggggt cagtgtgaag ggcaagacgt gctcgaatct gaatgcctcc ggatcgagtg 2881 cctccagcgg cagcaacgga ggaggaggag caggaggact gatgaagctc gacggcgacc 2941 tggggatatt cgtgaagaac gtcatccatg gtggagcggc gtcgcgcgac ggtcgcctgc 3001 ggatgaacga tcagctgctg agcgtgaatg gagtatcgct aaggggtcaa aataacgccg 3061 aggccatgga gacactgcgt cgagcgatgg tcaatacgcc cggcaagcat ccgggcacca 3121 taaccctgct cgtgggccgc aagatcctgc gatcggccag ctccagcgac atcctggacc 3181 acagtagcag ccatagtcac agcaatagca gcagcggcgg gagcaattcg aatggcagcg 3241 gccataacaa caatagcagc tcgaatgcca gcgacaattc cggagccacg gtcatctact 3301 tgagtcccga gaagcgggag cagcgttgca atggcggcgc cactggaggc agtgccggca 3361 atgagatgaa cagatggagc aaccccgttt tggatcgcct aaccggtggc atttgctcgt 3421 cgaactcagc gcagccatcc tcccagcagc agcagccgac acatccctcc cagcagcaac 3481 agcagacgca gcagcagcag caacagcagc gccgcctgcc cgcaccgccc gtttgcagca 3541 gtgcagcgtt gaggaacgag agctactaca tggccaccaa cgacaactgg tcgccggcgc 3601 agctgcacct gctcactggc cacggcaaca cggcgctgct catcgaggac gacgctgagc 3661 ccatgtcgcc aaccctgccg gcgcgtcctc acgatgggca gcactgcaac gcgagcagcg 3721 ccaatccatc gcagaatttg aacgcagccg gcggaagcca tccggtggtc gtggtaccgg 3781 gcacaccgtc gacgtccagc aactttgatg ccacctactc gtcgcaactg agcctggaga 3841 ccaactccgg cgtggagcac ttctcgcgcg atgccctcgg caggcgcagc atctcggaga 3901 agcatcatgc ggcgctggat gcccgcgaaa cgggcaccta tcagcggaac aagaagttgc 3961 gcgaggagcg ggagcgcgag cgacgcatcc agctgaccaa gtcggctgtc tacgggggat 4021 ccattgagtc gctcaccgcc cgcatagcca gtgcgaatgc ccagttctcg ggctacaagc 4081 acgcgaagac ggcttcgagc atcgagcagc gggagacgca gcagcaaatg gccgcggccg 4141 ccgagtcgga ggccagggat cagctgggcg atctcggccc gtcgctgggc atgaagaagt 4201 cctcgtcgct ggagtcgctg cagacgatgg tgcaggagct gcagatgtcc gatgagccgc 4261 gtggccatca ggcgctgcgg gcgccgcgtg ggcgtggcag ggaggatagt ctgcgagcgg 4321 cggtggtcag cgaaccagat gcgagcaagc cccgcaagac ctggcttctg gaggacggcg 4381 atcacgaggg cggcttcgct gcgcagcgga atggaccctt tcagagctcc ctgaacgatg 4441 gcaagcatgg cagcaagtcg tcgcgggcca agaagccgag cattctgcgc ggcatcgggc 4501 acatgttccg cttcggcaag aaccgcaagg acggcgtggt gccggtggac aattatgcgg 4561 tgaccatatc gccgcccaca tcggtggtct ccaccgccac gtcgccgcag ttgcagcagc 4621 agcagcagtt gcagttgcaa cagcagcagc agcagctgca gcagcaacag atacccaccg 4681 ctgcattggc cgcgctggag aggaatggca agccgccggc gtatcaaccg ccgccaccgc 4741 tgcctgctcc gaatggcgtt ggtggtagca atggcatcca tcagaacgac atcttcaacc 4801 atcgctatca gcactatgcc aactacgagg atctgcacca gcagcatcag cagcaccaga 4861 ttagtggaga cgagtccccc acatccattt cggaaacgct ttcggagtcg acgctcgagt 4921 gcatgcgaca gcaggtcatc cggcagcgca tcaaggtcga ggcggaaagt cgccgccatc 4981 agcattacca ttcgcagcgc agtgcgcgct cgcaggatgt gagcatgcac tcgacgagct 5041 ccggctccca gccgggatcc ttggcccagc cgcagtcgca atccaatggc agcggagtcc 5101 gtcccatgag cagctactac gagtacgaga cggtgcagca gcagagggtg ggcagcatca 5161 agcacagcca cagcagcagc gccacctcgt cctcctcgtc gcccatcaat gtgccgcact 5221 ggaaggcggc ggccatgaac ggctactcgc cggccagcct gaacagcagc gctcggagtc 5281 gcggtccgtt tgtgacccag gtgaccatac gtgagcagag ccacctgctg cagcagcatc 5341 accagcagca gcaacagcag cagcagcttc agcagcagcc cacctaccag accgttcaga 5401 agatgtccgg agcatcgcaa tatggcactg ccgccggctc ccagccgcac gcctccaagg 5461 tgtgactata ggtgttggcg caggcgcgcg ccacccgcga tgtgctggcc gagaaccggg 5521 tcattctcag cgaggccaac gaggaggtgg aggtcttcta ctttgccacc gagtgctgaa 5581 tttagtttgt ttagtttgga gtggagaaga aatggaacac acattggggg gtgggttgat 5641 tattgtaatc tttcaagtga aacttttgta ttccacatca attgtaagcc ttaaaaatga 5701 aagcaaggcc agaggaaata tgttttatgt tttgagcttt gaaaaccaac ggatgaggtt 5761 gctacttaac ttatttaaaa tcctgattaa ttaatatacc tacaattatc cgtgatattt 5821 ggttaagcaa acaaacggaa agaaccagga taaaatattt tcaacggtcc gctaggagag 5881 gataacaccg attttatgtt ttttgtaaat tactttgcga atattacttt gattcaacag 5941 atttcaaacc aattgaccca ccctgacaca cacacatcta ggctaagttc acgattcaca 6001 atatatatat acgacatata tagagatatg catatttggc gaaccagaaa ttagacacca 6061 gaaaccaaga gagtaacgag taaggaaagt attccccgta cagcgctgcc catttgtcga 6121 gtgcttaggc ttagatgttt aaactttaaa gtaaacaaaa acgatttccg attgtattaa 6181 gctttagctg taagtccaag tcaaacgcct ttgtacataa ttagtttacg cagaagccag 6241 caaaaagaaa agcaaagaaa aggagaacaa ctttaaattc caaaactacg aaaggtctta 6301 agaatttcca ttgtcattta tacttatttt tttttttctt ccaacattta catatatatt 6361 ctttgatctg taaatagaac ttgtttgttt gttttgttaa gctttaaagc ggacgccatt 6421 ttgtgtgtgc aaacgtgtgg atttgcaaga agcgaaaagt aaaacttata gccaacccat 6481 atacattata tagctatatg cgtaagtgaa gcaatttttt tttccctaac gataatcgag 6541 cttagaaaag agtaaaagtt ttgtgcagcc gaccgcggcc caggtctcta aaaaagacaa 6601 gcagcttaat ttagttatac gaacccatac gattaagccc aatttagtgg gtaagcctac 6661 atgtatagcg aatatatacg atactttaat tttgtgtact tcctaagtaa tttgtgcgat 6721 accgaatacc gagttgcgaa ttaaaagtta caaattttca taaacca