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LOCUS XM_017151445 5977 bp mRNA linear INV 09-DEC-2024 regulator (baz), transcript variant X2, mRNA. ACCESSION XM_017151445 VERSION XM_017151445.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151445.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5977 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5977 /gene="baz" /note="par-3 family cell polarity regulator; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108064086" CDS 239..4675 /gene="baz" /codon_start=1 /product="partitioning defective 3 homolog isoform X1" /protein_id="XP_017006934.2" /db_xref="GeneID:108064086" /translation="MFDVPPKCPALANKLGGLFGWRHTYKVAAKHEGIPHGQLHKSYS LTLPKRPPSPSAYSCVKPDSWVTVTHLQTQSGILDPDDCVRDVADDREQILAHFEDPG PDPGVPQGGGDGASGSSSVGTGSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMA GLGVGLMVRRSSDPNLLASLKAEGSNKRWSAAAPHYAGGDSPERLLLDKAGGQLSPQW EEDDDPGQQLKEQLLQQQQQPHGAGSANNHQPFARSGRLSMQFLGDGNGYKWMEAAEK LQSQPTTAQQMHHHHPSGSSYSSKSLPRESKRKEPLGQAYESIREKDGEMLLIINEYG SPLGLTALPDKEHGGGLLVQHVEPGSRAERGRLRRDDRILEINGIKLIGLTESQVQEQ LRRALESSELRVRVLRGNRSRNSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLG RKIEILLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVD GTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQAGQPAAEKSVTAVAAPAPAA IPIPVQKSSSARSLFTQQSQLNESQHFIDAGSESAASNDSLPPSSNNWHSREELTLHI PVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGGGGAGGLMKLDGDLGIFVKNVIH GGAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRK ILRSASSSDILDHSSSHSHSNSSSGGSNSNGSGHNNNSSSNASDNSGATVIYLSPEKR EQRCNGGATGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQQQPTHPSQQQQQTQ QQQQQQRRLPAPPVCSSAALRNESYYMATNDNWSPAQLHLLTGHGNTALLIEDDAEPM SPTLPARPHDGQHCNASSANPSQNLNAAGGSHPVVVVPGTPSTSSNFDATYSSQLSLE TNSGVEHFSRDALGRRSISEKHHAALDARETGTYQRNKKLREERERERRIQLTKSAVY GGSIESLTARIASANAQFSGYKHAKTASSIEQRETQQQMAAAAESEARDQLGDLGPSL GMKKSSSLESLQTMVQELQMSDEPRGHQALRAPRGRGREDSLRAAVVSEPDASKPRKT WLLEDGDHEGGFAAQRNGPFQSSLNDGKHGSKSSRAKKPSILRGIGHMFRFGKNRKDG VVPVDNYAVTISPPTSVVSTATSPQLQQQQQLQLQQQQQQLQQQQIPTAALAALERNG KPPAYQPPPPLPAPNGVGGSNGIHQNDIFNHRYQHYANYEDLHQQHQQHQISRRHQHY HSQRSARSQDVSMHSTSSGSQPGSLAQPQSQSNGSGVRPMSSYYEYETVQQQRVGSIK HSHSSSATSSSSSPINVPHWKAAAMNGYSPASLNSSARSRGPFVTQVTIREQSHLLQQ HHQQQQQQQQLQQQPTYQTVQKMSGASQYGTAAGSQPHASKV" misc_feature <422..538 /gene="baz" /note="N-terminal of Par3 and HAL proteins; Region: Par3_HAL_N_term; pfam12053" /db_xref="CDD:463446" misc_feature 1205..1465 /gene="baz" /note="PDZ domain 1 and PDZ domain 3 of Drosophila bazooka (DmPar3), and related domains; Region: PDZ1_PDZ3_bazooka-like; cd06665" /db_xref="CDD:467154" misc_feature order(1244..1264,1295..1297,1304..1306,1394..1396, 1406..1408,1415..1420) /gene="baz" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467154" misc_feature 1580..1858 /gene="baz" /note="PDZ domain 2 of partitioning defective 3 (Par3), and related domains; Region: PDZ2_Par3-like; cd23058" /db_xref="CDD:467271" misc_feature order(1625..1645,1688..1690,1697..1699,1787..1789, 1799..1801,1808..1813) /gene="baz" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467271" misc_feature 2087..2458 /gene="baz" /note="PDZ domain 3 of partitioning defective 3 (Par3), and related domains; Region: PDZ3_Par3-like; cd23059" /db_xref="CDD:467272" misc_feature order(2135..2155,2270..2272,2279..2281,2369..2371, 2381..2383,2390..2395) /gene="baz" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467272" polyA_site 5977 /gene="baz" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacaaagaat aaaccaagaa caatagcaat aataataaca atgactaagc gttgaatcac 61 aattaatact tacctataaa atatcatata gcggtgaaat gttcctcaaa ttacaattaa 121 acggcagtga caaagaaaag ccaacgaaaa gcgaacagta aaacgattaa aaagtgaaga 181 tataaaaata aatatataaa accaataagc aaataccaaa gatcggattt ggatcgacat 241 gttcgacgta ccgccaaaat gtccggcgct ggccaacaag ttgggcggtc tctttggatg 301 gcgacacacc tacaaggtgg ccgccaagca cgaggggatt ccccacgggc agctccacaa 361 gtcctactcc ctcacgctgc ccaagcgacc gccatcgccc tcggcctact cgtgtgtgaa 421 gcccgattcc tgggtgaccg tgacccatct gcagacacag tcgggcatcc tcgatccgga 481 tgactgtgtg cgcgacgtgg ccgacgaccg ggagcagata ctggcccact tcgaggaccc 541 gggaccggat ccgggcgtcc cgcagggcgg cggcgacggt gcgtcgggca gttcgtccgt 601 gggcaccggc tcgccggaca ttttccgcga tccgaccaac acggaggcgc ccacctgtcc 661 gcgcgatctg tccacgccgc acatcgaggt gaccagcact acgtcgggtc cgatggccgg 721 actaggagtg ggcctgatgg tccgtcgcag cagtgatccc aatctgctgg cctccctgaa 781 ggcggagggc agcaacaagc gctggtcggc ggcggctccc cactacgctg gcggagattc 841 ccccgagcgc ctgctcctgg acaaggccgg tggccagttg tcgccccagt gggaggagga 901 cgacgatccc ggccagcagc taaaggagca gctgctccag cagcagcagc agccacatgg 961 agcaggatca gccaacaacc accagccatt cgctcgatcc ggccgcctgt ccatgcagtt 1021 tctgggcgac ggcaatggct acaagtggat ggaggcggcc gagaagctgc agagccagcc 1081 gacaacagcc cagcagatgc atcatcatca tccctctggc agctcctatt ccagcaaatc 1141 gctgccccgg gagagcaagc gcaaggagcc gctgggccag gcatacgaat ccatacgcga 1201 gaaggacggc gagatgctgc tgatcatcaa cgagtacggc agtccgctgg gactgacggc 1261 tctgcccgac aaggagcacg gcggcggact gctggtgcag cacgtggagc cgggcagtcg 1321 ggcggagagg ggacggctgc gtcgcgatga tcgcatcctc gagatcaacg gcatcaagct 1381 gatcggactg actgagtcgc aggttcagga gcagctgcgt cgggccttgg agagctcgga 1441 gctgagggtt cgagtgctgc gcgggaatcg gagcagaaac tccaaggtgg ccgagatggt 1501 ggaggtggcc acggtgtcgc ccacccggaa gccacatgcc gctccagtcg gcacctccct 1561 ccaggtggcc aacacacgca agctgggcag aaagattgag atactgctga agaagggacc 1621 caatggactg ggcttctcgg tgacgacgcg cgacaatccc gccggcggac attgccccat 1681 ctacatcaag aacatcctgc cgcgcggagc agccatcgag gatggtcgcc tgaagcctgg 1741 cgatcgcctg ctggaagtgg acggcactcc gatgacgggg aagacgcaaa cggatgtggt 1801 ggccattttg aggggaatgc cagcgggggc cactgtgagg attgtggtct cgcggcagca 1861 ggagttggcc gagcaggctg gccagccggc ggcggagaag agtgtgactg cagttgctgc 1921 tcccgctccg gctgccattc caattcccgt ccagaaatcc agcagtgcac gatctctgtt 1981 tacccagcaa tcgcagctca acgaatctca gcactttatc gatgcgggca gcgagtcggc 2041 ggcctcgaat gacagcctgc ccccgagcag caacaactgg cattcgcgcg aggagctgac 2101 ccttcacatt cccgttcacg acaccgaaaa ggccggactg ggggtcagtg tgaagggcaa 2161 gacgtgctcg aatctgaatg cctccggatc gagtgcctcc agcggcagca acggaggagg 2221 aggagcagga ggactgatga agctcgacgg cgacctgggg atattcgtga agaacgtcat 2281 ccatggtgga gcggcgtcgc gcgacggtcg cctgcggatg aacgatcagc tgctgagcgt 2341 gaatggagta tcgctaaggg gtcaaaataa cgccgaggcc atggagacac tgcgtcgagc 2401 gatggtcaat acgcccggca agcatccggg caccataacc ctgctcgtgg gccgcaagat 2461 cctgcgatcg gccagctcca gcgacatcct ggaccacagt agcagccata gtcacagcaa 2521 tagcagcagc ggcgggagca attcgaatgg cagcggccat aacaacaata gcagctcgaa 2581 tgccagcgac aattccggag ccacggtcat ctacttgagt cccgagaagc gggagcagcg 2641 ttgcaatggc ggcgccactg gaggcagtgc cggcaatgag atgaacagat ggagcaaccc 2701 cgttttggat cgcctaaccg gtggcatttg ctcgtcgaac tcagcgcagc catcctccca 2761 gcagcagcag ccgacacatc cctcccagca gcaacagcag acgcagcagc agcagcaaca 2821 gcagcgccgc ctgcccgcac cgcccgtttg cagcagtgca gcgttgagga acgagagcta 2881 ctacatggcc accaacgaca actggtcgcc ggcgcagctg cacctgctca ctggccacgg 2941 caacacggcg ctgctcatcg aggacgacgc tgagcccatg tcgccaaccc tgccggcgcg 3001 tcctcacgat gggcagcact gcaacgcgag cagcgccaat ccatcgcaga atttgaacgc 3061 agccggcgga agccatccgg tggtcgtggt accgggcaca ccgtcgacgt ccagcaactt 3121 tgatgccacc tactcgtcgc aactgagcct ggagaccaac tccggcgtgg agcacttctc 3181 gcgcgatgcc ctcggcaggc gcagcatctc ggagaagcat catgcggcgc tggatgcccg 3241 cgaaacgggc acctatcagc ggaacaagaa gttgcgcgag gagcgggagc gcgagcgacg 3301 catccagctg accaagtcgg ctgtctacgg gggatccatt gagtcgctca ccgcccgcat 3361 agccagtgcg aatgcccagt tctcgggcta caagcacgcg aagacggctt cgagcatcga 3421 gcagcgggag acgcagcagc aaatggccgc ggccgccgag tcggaggcca gggatcagct 3481 gggcgatctc ggcccgtcgc tgggcatgaa gaagtcctcg tcgctggagt cgctgcagac 3541 gatggtgcag gagctgcaga tgtccgatga gccgcgtggc catcaggcgc tgcgggcgcc 3601 gcgtgggcgt ggcagggagg atagtctgcg agcggcggtg gtcagcgaac cagatgcgag 3661 caagccccgc aagacctggc ttctggagga cggcgatcac gagggcggct tcgctgcgca 3721 gcggaatgga ccctttcaga gctccctgaa cgatggcaag catggcagca agtcgtcgcg 3781 ggccaagaag ccgagcattc tgcgcggcat cgggcacatg ttccgcttcg gcaagaaccg 3841 caaggacggc gtggtgccgg tggacaatta tgcggtgacc atatcgccgc ccacatcggt 3901 ggtctccacc gccacgtcgc cgcagttgca gcagcagcag cagttgcagt tgcaacagca 3961 gcagcagcag ctgcagcagc aacagatacc caccgctgca ttggccgcgc tggagaggaa 4021 tggcaagccg ccggcgtatc aaccgccgcc accgctgcct gctccgaatg gcgttggtgg 4081 tagcaatggc atccatcaga acgacatctt caaccatcgc tatcagcact atgccaacta 4141 cgaggatctg caccagcagc atcagcagca ccagattagt cgccgccatc agcattacca 4201 ttcgcagcgc agtgcgcgct cgcaggatgt gagcatgcac tcgacgagct ccggctccca 4261 gccgggatcc ttggcccagc cgcagtcgca atccaatggc agcggagtcc gtcccatgag 4321 cagctactac gagtacgaga cggtgcagca gcagagggtg ggcagcatca agcacagcca 4381 cagcagcagc gccacctcgt cctcctcgtc gcccatcaat gtgccgcact ggaaggcggc 4441 ggccatgaac ggctactcgc cggccagcct gaacagcagc gctcggagtc gcggtccgtt 4501 tgtgacccag gtgaccatac gtgagcagag ccacctgctg cagcagcatc accagcagca 4561 gcaacagcag cagcagcttc agcagcagcc cacctaccag accgttcaga agatgtccgg 4621 agcatcgcaa tatggcactg ccgccggctc ccagccgcac gcctccaagg tgtgactata 4681 ggtgttggcg caggcgcgcg ccacccgcga tgtgctggcc gagaaccggg tcattctcag 4741 cgaggccaac gaggaggtgg aggtcttcta ctttgccacc gagtgctgaa tttagtttgt 4801 ttagtttgga gtggagaaga aatggaacac acattggggg gtgggttgat tattgtaatc 4861 tttcaagtga aacttttgta ttccacatca attgtaagcc ttaaaaatga aagcaaggcc 4921 agaggaaata tgttttatgt tttgagcttt gaaaaccaac ggatgaggtt gctacttaac 4981 ttatttaaaa tcctgattaa ttaatatacc tacaattatc cgtgatattt ggttaagcaa 5041 acaaacggaa agaaccagga taaaatattt tcaacggtcc gctaggagag gataacaccg 5101 attttatgtt ttttgtaaat tactttgcga atattacttt gattcaacag atttcaaacc 5161 aattgaccca ccctgacaca cacacatcta ggctaagttc acgattcaca atatatatat 5221 acgacatata tagagatatg catatttggc gaaccagaaa ttagacacca gaaaccaaga 5281 gagtaacgag taaggaaagt attccccgta cagcgctgcc catttgtcga gtgcttaggc 5341 ttagatgttt aaactttaaa gtaaacaaaa acgatttccg attgtattaa gctttagctg 5401 taagtccaag tcaaacgcct ttgtacataa ttagtttacg cagaagccag caaaaagaaa 5461 agcaaagaaa aggagaacaa ctttaaattc caaaactacg aaaggtctta agaatttcca 5521 ttgtcattta tacttatttt tttttttctt ccaacattta catatatatt ctttgatctg 5581 taaatagaac ttgtttgttt gttttgttaa gctttaaagc ggacgccatt ttgtgtgtgc 5641 aaacgtgtgg atttgcaaga agcgaaaagt aaaacttata gccaacccat atacattata 5701 tagctatatg cgtaagtgaa gcaatttttt tttccctaac gataatcgag cttagaaaag 5761 agtaaaagtt ttgtgcagcc gaccgcggcc caggtctcta aaaaagacaa gcagcttaat 5821 ttagttatac gaacccatac gattaagccc aatttagtgg gtaagcctac atgtatagcg 5881 aatatatacg atactttaat tttgtgtact tcctaagtaa tttgtgcgat accgaatacc 5941 gagttgcgaa ttaaaagtta caaattttca taaacca