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PREDICTED: Drosophila takahashii a6 (a6), mRNA.


LOCUS       XM_017151230            1997 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017151230
VERSION     XM_017151230.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017151230.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1997
                     /gene="a6"
                     /note="a6; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:108063940"
     CDS             338..1480
                     /gene="a6"
                     /codon_start=1
                     /product="protein a6"
                     /protein_id="XP_017006719.2"
                     /db_xref="GeneID:108063940"
                     /translation="MNQRHSEPFYISPRLFDNRRLKRRRCRWMERLRERQRFCMAQMR
                     SQVAATKTDRRRGNHVVAMRTATLPADVTIDLLSDDDEPATPTPQHRRMPRRQGLAHP
                     VTESILITSDDEQFPARRSSPPPLAPLTLSRSSEAVEEVTVSLVPRSSTTANCQRQCR
                     APTNGRIMMGGKGGGRGAGGAGGAGSSSSDTSCFLEVDVGGGITATLPDETTVHTVIA
                     NRIYELSLSKLREGLAFSGVPEYTTDLLPEQLQKLSPALRAKVAPLVAPSPPTPISLK
                     LSSDLSISLISDDDDCESSGQQQANGAGGLGGGGLVGPVEAHAAAKLLKQQQPQLSVV
                     QHLQYVGGGLAGPVALALPVMATNATSSSATVVALPLQLPRRRKLG"
     polyA_site      1997
                     /gene="a6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgatgcagtt ttataaacag aagtctgaaa tacaacaaaa gcaactcgca accaggagca
       61 gctgtcgcgt ggaaaagcaa ccatctcggc ccagccagca gctcatcatg tccagcggcg
      121 ggaggggcag cgcctaatcc cgcgtcgccg ccgccctctg gaggcgcctc ctcatccgcc
      181 acgcaattat gcaagttgca gcagcggatc caactgtacc gcctgtggaa gaagtggaag
      241 aggaagagca agaggaggag gaggagtccc agtcccatga cctctgaaca ggatcatcca
      301 ccagatcagt ccactcaatc gcagaaccga accagagatg aaccagagac attccgaacc
      361 attctacata tcgccccggc tgttcgacaa caggcggctc aagcggcgcc gctgccggtg
      421 gatggagcgc ctgcgggagc gccagcggtt ctgcatggcc cagatgcgta gccaggtggc
      481 cgccaccaag actgaccgcc ggcgtggtaa ccatgtggtg gccatgagaa cagccaccct
      541 gccggccgac gtgaccatcg acctgctgtc ggatgacgac gaacctgcca cccccacccc
      601 ccagcatcga cgaatgcccc gccggcaggg cctcgcgcat cccgtgacgg agagcatcct
      661 gataaccagc gatgacgagc agttccccgc caggcgctcc tcgccgccgc ccctcgcacc
      721 gctcaccttg tcccgttcgt cggaggccgt cgaggaggtg accgtttcgc tggtgccgcg
      781 cagctccacc actgccaact gccagaggca atgtcgagcg cccaccaatg ggaggattat
      841 gatgggagga aaaggaggag gaagaggggc aggaggagca ggaggagccg gcagcagcag
      901 cagcgatacg agctgctttc tggaggtgga cgtgggcgga ggcatcacgg ccacgctgcc
      961 cgacgagacc accgtgcaca cggtcatcgc caatcgcatc tacgagctct cgctgagcaa
     1021 gctgcgcgag ggccttgcct tcagcggagt gccggaatac acgaccgacc tgctgccgga
     1081 gcaactgcag aagctgtcgc cggcgctgcg ggccaaggtg gcccccctgg tggctccctc
     1141 gccgcccacg cccatttccc tgaagctgtc cagcgacctc agcatatcac tgatctcaga
     1201 cgacgacgac tgcgagagca gcggccagca gcaggccaac ggagcaggag gattaggagg
     1261 aggaggactg gttggtcctg tcgaggcgca tgcggccgcc aagctgctga agcagcagca
     1321 gccgcagctc tcggtggtgc agcatctgca gtacgtgggc ggcggactcg cgggccccgt
     1381 ggctctggcc ctcccggtga tggccaccaa tgccacgtcc tcgtccgcca ccgtggtggc
     1441 tctgcccctg cagctgccgc ggcgccggaa gctgggatga gctaggatga gctaatccga
     1501 tctgatccga gtacccatcg ccataatatc attcccagac tttttctagc agtggctagt
     1561 agtgcaaata tgaaggtagt tttaagtgac atcacagctt ccctcccagt tatccttgaa
     1621 taccaccctt cccataccac ttcccatctc actctgtttc ccacacatca caataacccc
     1681 gtctctgtca ttctcatatt ctaagcttta aatgaaacga gacgacaaac gtacaaagga
     1741 aagtagtaga gcatcgcata tcgcatcggc gcatataatc aagaagagaa gacaaatttt
     1801 taaaatttac acatcggagg gaatagaaaa tttgaaagca taccaatatt tataccgtac
     1861 aagtagttag actaagctat gcattatgta catttgaata agcgtggatt gtgcttcggg
     1921 tgaatcgtac acacagtctg tattacattt aactgatcac cgaatcggaa taaacttgca
     1981 ttgtatatac ctgtaca