PREDICTED: Drosophila takahashii stubarista 40S ribosomal protein

LOCUS       XM_017151216             969 bp    mRNA    linear   INV 09-DEC-2024
            SA (sta), mRNA.
ACCESSION   XM_017151216
VERSION     XM_017151216.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 18, 2021 this sequence version replaced XM_017151216.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..969
                     /gene="sta"
                     /note="stubarista 40S ribosomal protein SA; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:108063929"
     CDS             98..910
                     /gene="sta"
                     /codon_start=1
                     /product="small ribosomal subunit protein uS2"
                     /protein_id="XP_017006705.1"
                     /db_xref="GeneID:108063929"
                     /translation="MSGGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRAD
                     GVNILNLGKTWEKLQLAARAIVAIDTPSDVFVISSRPIGQRAVLKFAKYTDTTPIAGR
                     FTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA
                     IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAK
                     ELLPPPKIEEAVDHPVEETTNWADEVAAETVGGVEDWNEDTVKTSWGSDGQF"
     misc_feature    98..838
                     /gene="sta"
                     /note="40S ribosomal protein SA; Provisional; Region:
                     PTZ00254"
                     /db_xref="CDD:240331"
     polyA_site      969
                     /gene="sta"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatcgaaaag cgacatccgc gatgccgacc gactactctg ccattttgtc aaaactccca
       61 gcggcatcta gacgtccgta actctttcca cgttaacatg tcgggaggct tagatattct
      121 gtccctcaag gaggacgaca tcaccaagat gttggtggcc accacccacc tgggctccga
      181 gaacgtcaac ttccagatgg agcagtacgt gtacaagcgt cgcgccgacg gagtgaacat
      241 cctcaatctg ggcaagacct gggagaagct ccagctggcg gcccgcgcca tcgtggccat
      301 tgacacgccc tcggatgtct tcgtcatctc gtcgcgtccc atcggccagc gcgccgtgct
      361 gaagttcgcc aagtacacgg acaccactcc catcgccggc cgcttcacgc ccggtgcctt
      421 caccaaccag atccagcccg ccttccgcga gccccgtctg ctggtggtga ccgaccccaa
      481 caccgatcac cagcccatca tggaggccag ctacgtgaac atccccgtga tcgccttcac
      541 caacaccgat tcgccgctgc gctacatcga cattgccatt ccgtgcaaca acaagtcggc
      601 gcactccatc ggcctgatgt ggtggctcct ggcccgcgag gtgctccgcc tgcgcggcac
      661 catctcgcgc agcgtcgagt ggcccgtggt cgtcgacctg ttcttctacc gcgaccccga
      721 ggaggccgag aaggaggagg ccgccgccaa ggagctgctg ccgccaccaa agatcgagga
      781 ggccgtcgac catcccgtcg aggagaccac caactgggcc gatgaggtgg ccgccgagac
      841 cgttggcgga gtggaggact ggaacgagga caccgtcaag acctcctggg gcagcgatgg
      901 ccagttctaa ggagtccgca tctgaattcg atcagaaggc gtaaataaac agcccttgtt
      961 tatatctaa