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PREDICTED: Drosophila takahashii titin (LOC108063925), transcript


LOCUS       XM_017151209            2524 bp    mRNA    linear   INV 09-DEC-2024
            variant X2, mRNA.
ACCESSION   XM_017151209
VERSION     XM_017151209.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017151209.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2524
                     /gene="LOC108063925"
                     /note="titin; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108063925"
     CDS             348..1556
                     /gene="LOC108063925"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_017006698.1"
                     /db_xref="GeneID:108063925"
                     /translation="MTRNAAVSGDEPDEEQTSAADGAEGEDQNSQLQLQDQDQSEDQV
                     VGQPADDGHLQPSSTEQRRQRPRRSKQPQQRSAAIVTDPDADTDSSSCEGIKVGQRRS
                     TRVSYAQSNLHEEQEELDDDYDYDDEEEEEDEGEEDYEEEEESYDDYEQSSKIGGGRR
                     RRPRPSPHPQTALSVRSRRKTKTQRQISYASSDLELVTGMGYPGNGTNLIEGESMDKR
                     RCISKGQMREFREAFRLFDKDGDGCITKEELGTVMRSLGQFARVEELQEMLQEIDVDG
                     DGNVSFEEFVDILSNMTYEDKSGLSSADQEERELRDAFRVFDKHNRGYITASDLRAVL
                     QCLGEDLDEEDIEDMIKEVDVDGDGRIDFYEFVHALGEPEDSQENDDEEENTTSPLPT
                     PKSAISLSYD"
     misc_feature    1020..1448
                     /gene="LOC108063925"
                     /note="calmodulin; Provisional; Region: PTZ00184"
                     /db_xref="CDD:185504"
     polyA_site      2524
                     /gene="LOC108063925"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atctttcaca tccccattta cagttagttt ttggccgatt tcggcgcgtt tggttaagtt
       61 gcggaagttc gcgtccccgt ggtcttcgct ccgacacgtc tggttttgtc cgaatttcgt
      121 gctgtgaact cgctggattg ccaattgcag ccgttcgatt tggaatttgc atatcctgcg
      181 aaccgaaagc ggttgaagct cctttacagg aggcggagga ggaggattct ttgccgcaga
      241 tcccctgaag cgggaggaag gccgccacgt tggaaggaaa acggcttttc acggcagtta
      301 ataaattttt aactggttca acaattgccc gcgagttccg ccagctaatg acgagaaacg
      361 cggcggtgag tggcgatgaa cccgacgagg agcagacgtc agcagcggat ggcgccgagg
      421 gggaggatca gaacagccag cttcagcttc aggatcagga tcagtcggag gatcaggttg
      481 tcgggcagcc agccgacgat ggccaccttc agccatcctc gactgagcag cgccgtcaga
      541 ggccgcgaag gagtaagcaa ccacagcaac gaagcgctgc cattgtaaca gatccggatg
      601 cggacacgga ttccagctcc tgcgagggca tcaaagtggg tcagcggagg agcacgcggg
      661 tcagctacgc acagagcaac cttcatgagg agcaggagga actggacgac gactacgact
      721 acgacgacga ggaggaggag gaggacgagg gcgaagagga ttacgaggag gaggaagagt
      781 cgtacgacga ctacgaacag tcctcgaaaa tcggaggagg acgtcgtcgt cgtccgcgtc
      841 cttctcctca tccccagacc gccttgagtg tccgcagcag acgcaagacg aaaacccaac
      901 gtcaaatatc ctatgcctcg tcggatttgg aattggtaac gggaatgggt tacccaggca
      961 atgggacgaa cctgatcgag ggcgagtcca tggacaagcg ccgctgcatc tccaagggac
     1021 agatgcggga attccgcgag gcctttcggc tgttcgacaa ggatggcgat ggctgcatca
     1081 ccaaggagga gctgggcaca gtcatgcgat cgctgggcca atttgccagg gtcgaggagc
     1141 tgcaggagat gttgcaggag atcgacgtgg atggcgatgg caatgttagt ttcgaggagt
     1201 tcgttgacat cctgtcgaac atgacatatg aagacaagtc gggtctctcc tccgccgatc
     1261 aggaggagcg ggaattgcgc gacgcctttc gcgttttcga taagcacaat cggggctata
     1321 ttacggcctc cgatttgcgc gcggtactac agtgtttggg ggaagatctc gacgaggagg
     1381 atattgagga catgatcaag gaggtcgatg tggatggcga tgggcgcatc gatttctacg
     1441 agtttgttca cgctttgggg gaaccggagg attcgcaaga aaacgacgac gaggaggaga
     1501 ataccacatc gccgctaccc acaccgaaat cggcgatttc tctcagctac gactaagcga
     1561 taatcgactt cgttacatgt ccatattaat cgattacgat tacagacaga ttaaagtaac
     1621 agttaataaa aataataaat taattcgata ctcgagccac aaatggtcga cctgcaataa
     1681 tgtgaaccgc taaggatgtt catcaataat cgaacgacaa aagactcgaa aggtatcgct
     1741 tatttcttat cgactttttt cgactactaa gccatatagt taatcgatag gaaatcgatt
     1801 gaccagcatt agccaaacag tttaaactga taactcatca aatttattac atttaaattg
     1861 agaaattgag agcacgcaca gctaatcaaa ttgaaatgat tattaaatat atatagccta
     1921 ttgaataatc gaattgcaaa caaacttaac caataaacga tttactttac atcgatatat
     1981 gagaaaaact aactccaatt ttaaaatcgc gatctaaaat ctacctttcc actcaagtcc
     2041 aattggaaat caaaactaat tttagcttgt aaccaataaa gataacttat ccatgggatt
     2101 atccaactta acagcacaaa tacatatata tttcaagaca tatcattgaa gacgcctctg
     2161 taaatgtgtt ttgtaagccc gccctattga acccatcctt ataaatatat atatatatac
     2221 cccatacccc ttagctctcc ctctcccgtg ttatttccca ttttctctta cgatttttga
     2281 cttgcatcgt ataatatgga atacatttat ttatttagga aatatttgct caattattgc
     2341 tgctgccgta gagcaggaaa aaataacaaa actaatgctc gctaatacga aagtttttta
     2401 agtattgaac gaacaattta atgtaattta caatttacaa ttttaatcca aatttcgaat
     2461 cgaaaatcca aaaaaaaaac caaaataaaa cgaaagtata aataaaatga tattacaaaa
     2521 caga