PREDICTED: Drosophila takahashii mitochondrial tRNA-specific

LOCUS       XM_017151201            1328 bp    mRNA    linear   INV 09-DEC-2024
            2-thiouridylase 1 (LOC108063915), mRNA.
ACCESSION   XM_017151201
VERSION     XM_017151201.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017151201.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1328
                     /gene="LOC108063915"
                     /note="mitochondrial tRNA-specific 2-thiouridylase 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:108063915"
     CDS             61..1218
                     /gene="LOC108063915"
                     /codon_start=1
                     /product="mitochondrial tRNA-specific 2-thiouridylase 1"
                     /protein_id="XP_017006690.2"
                     /db_xref="GeneID:108063915"
                     /translation="MIRKVVVGVSGGVDSAVSAHLLAERGYQVLGVFMRNWDEMDEVG
                     RCSGEADLRDAEWACRRLGVELRQVNYVREYWTSVFSQFLDDYQQGLTPNPDILCNRH
                     IKFDLFHRHAIGNLGYDAVATGHYARNSWGNFLERITPESEARLLIPADTFKDQTFFL
                     AGIPQRALQRTMFPLGDLHKSQVKQLAGKIGLQRLAEKKESTGICFVGKRNFKDFIKE
                     YISSRRGPFLDIDSGDIVGHHEGIHQWTVGQRCRLSSYRQPYFVARKDAKINAIYVAS
                     GHDHPALLSNRINIDPPNWLCEESRRRLVEERSLRCRFRFQHTKPLVGCQLKMGAPGS
                     DYLVQLDAPLRAITPGQYAVFYDETACLGSARILSADPLEKREREVLKTAV"
     misc_feature    100..1161
                     /gene="LOC108063915"
                     /note="MnmA/TRMU family 2-thiouridylases and similar
                     proteins; Region: MnmA_TRMU-like; cd01998"
                     /db_xref="CDD:467502"
ORIGIN      
        1 aaccagctga ttgccccaac gtacagttgt taaatttaaa atcacagttc ggagctccaa
       61 atgattcgca aggtggtggt gggcgtgtcg gggggcgtgg acagcgccgt cagcgcccac
      121 ctgttggcgg agcggggcta ccaggtgctc ggcgtcttca tgcgcaactg ggacgagatg
      181 gacgaagtgg gtcgctgcag cggggaggcg gatctccggg acgcggagtg ggcgtgtcgc
      241 cgcctcggcg tggagctgcg ccaggtgaac tatgtgcgcg agtactggac gtcggtgttc
      301 agccagttcc tggatgacta ccagcagggc ttgaccccga atccggacat cctgtgcaat
      361 cgtcacatca aattcgacct cttccaccgt cacgccatcg ggaatttagg ctacgatgcg
      421 gtggccaccg gtcactacgc ccgcaacagc tggggcaact ttctggagcg gattaccccc
      481 gaaagcgaag cccgtttgct catacccgcc gacaccttca aggatcagac cttctttctg
      541 gccgggattc cccagcgggc cctccaacgc accatgttcc cgctgggcga cctgcacaag
      601 agccaggtga agcaattggc tgggaagatt ggcctacagc ggctggccga gaagaaggag
      661 agcacgggca tttgtttcgt gggcaagcgc aatttcaagg atttcataaa ggagtacatc
      721 tcgtccagga gaggaccctt cctggacatc gacagtggtg atatagtggg ccaccacgag
      781 ggcattcatc agtggacggt gggccagcgc tgccgcctca gttcctaccg gcagccctac
      841 tttgtggccc gcaaggatgc caagatcaat gccatctatg tggcctcggg tcacgatcat
      901 cccgccctgc ttagcaaccg cataaacatc gatccgccca actggctgtg cgaggagtcc
      961 aggaggaggc tggtcgagga gagaagcctg cgatgtcgct tccgtttcca gcacaccaag
     1021 ccattggtgg gttgtcaatt gaagatggga gcaccaggta gtgactatct agtccagtta
     1081 gatgctcctt tgagagccat tactcccgga caatatgctg tattctatga cgagacggcc
     1141 tgcctaggtt cagcccgcat tctcagcgca gatcctctag agaaacggga acgcgaggtg
     1201 ctcaaaactg ccgtgtgaca aagaagaatc aatgcaagat aagcatgtga ccgcattata
     1261 aaataagtaa atattgtaaa ttatttaagt aaacttattg tacataacac actttctgaa
     1321 taaaccta