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LOCUS XM_017151194 3755 bp mRNA linear INV 09-DEC-2024 alpha-mannosidase-like protein 2 (Edem1), mRNA. ACCESSION XM_017151194 VERSION XM_017151194.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151194.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3755 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3755 /gene="Edem1" /note="ER degradation-enhancing alpha-mannosidase-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108063910" CDS 173..3073 /gene="Edem1" /codon_start=1 /product="ER degradation-enhancing alpha-mannosidase-like protein 2" /protein_id="XP_017006683.3" /db_xref="GeneID:108063910" /translation="MQQQMTGTVILSCAVLLLLATAGGANGQKQYSKARKLELREDVR RMFQHAYEGYLRHASNYDELRPLTCDGHDTWGSYSLTLIDALDTLAAMGNFTEFRRVA RLLEEKMNFDRDINVSVFETNIRIVGGLLSAHLLSKRAGLAVEQGWPCRGPLLRLAED VARRLLPAFDTSTGMPYGTVNLRYGVPKGETSVTCTAGVGTFLVEFGTLSRLTGNSIY EEVALQAVHALWAHRSPIGLFGNHIDVQSGRWTALDSGIGAGVDSLFEYLVKAAVLLN RPELLDLFHEARAAIDKYMRKEDWYVWVGMNKGHVTLPVFQSLEAFWPGILSIIGDTE PAVRTISRYIGVWKKYGFLPEFYNIAAGEASPNREVYPLRPELIESAMYLYRATGNEY LLELGEHMLETLEFSAKTKCGYATIRNVVTHEKENRMESFFLAETSKYLYLLFDEDNF LHNDGSGGELQSTEDDVCVVQAGAYVFNTEAHPMDMSALHCCHAHHEDIYASLDLQRF TPRAIFERSRERQVAAQEQWVPQCQPESHEHFYKEQESVQGQEAGREQGASTTMAVDI EVFDEFQQPAGDLLVSNFERIREERELNESLQRSEVPRNQLTVSDLDEFFAQRRENFG SAAEALNYVLAFMGNYTMDVAFIRGLQLYNANISGVLGTGAQKEYESRMRSLWQLYEL EQQYAANIRLIQGLGLLAIQADSERMRGYLAEVLDSLDRPDLQSPANASSSSQLGGIR EVILRARHAYAMAMVNTTAMQEFAIRIYLSGTSEAGVRIHPLLEPEELIREERLRPLK AAEERSLFSYARRIVDFRKRMAETVDRLQTLMQDVPAAKSKEAAESDSQVAGADADAS TVYAQTEAKEAAKAQQQQQQDQKLQKEKLAEEGSGSGQEESGSVWSQFVQTILRKTTV QRVKFDEAVLLEKTRKALEKHAHKELPHHLFACHRPEYIEGFAYRDFYPEAL" misc_feature 308..1624 /gene="Edem1" /note="Glycosyl hydrolase family 47; Region: Glyco_hydro_47; pfam01532" /db_xref="CDD:460241" polyA_site 3755 /gene="Edem1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagtaaaaa tccgaggata gggtattgag cggtcgaggc aacttcgcgt tgttgtgatt 61 ttgcgacaac gtagccgcat tcgacatcca catatccaca tccacgctgg cgatggggca 121 ctgaccatgc ccataattga attagcggcc ctgattgatt gactctccca cgatgcagca 181 gcagatgacc ggaacggtga tcctgagctg cgcggtgctc ctcctgctgg ccaccgccgg 241 cggagccaac ggccagaagc agtactccaa ggcgcggaag ctggagctgc gggaggacgt 301 gcgccgcatg ttccagcacg cctacgaggg ctacctgcgc cacgcctcca actacgacga 361 gctgcgcccg ctgacctgcg acggccacga cacctggggc agctactccc tgacgctgat 421 cgacgccctc gacacgctgg ccgccatggg caacttcacg gagttccgcc gcgtggcccg 481 gctgctcgag gagaagatga acttcgaccg ggacatcaac gtgtccgtgt tcgagacgaa 541 catccgcatc gtgggcggtc tgctgtccgc ccacctgctc tccaagcggg ccggcctggc 601 ggtggagcag ggctggccct gccggggtcc gctgctgcgg ctggcggagg acgtggcccg 661 ccgcctgctg cccgccttcg acacgagcac gggcatgccc tacggcacgg tgaacctccg 721 ctacggcgtg cccaagggcg agacctcggt gacctgcacg gccggcgtgg gcaccttcct 781 cgtcgagttc ggcacgctga gccgcctgac cgggaacagc atctacgagg aggtggccct 841 gcaggcggtc cacgccctgt gggcccaccg ctcgcccatc gggctcttcg gcaaccacat 901 cgacgtgcag agcggccgct ggacggcgct ggactcgggc atcggggcgg gcgtggactc 961 cctgttcgag tacctggtca aggcggccgt gctcctcaac cggccggagc tgctggactt 1021 gttccacgag gcccgcgcgg ccatcgacaa gtacatgcgc aaagaggact ggtacgtgtg 1081 ggtgggcatg aacaagggcc acgtcaccct gcccgtcttc cagtccctgg aggccttctg 1141 gcccggcatc ctcagcataa tcggggacac ggagccggcg gtgcgcacca tctcgcgata 1201 catcggggtg tggaagaagt acggcttcct gccggagttc tacaacattg ctgcgggcga 1261 ggcgtcgccc aatcgcgagg tgtatcccct gcgcccggag ctcatcgagt cggccatgta 1321 cctctaccgg gccacgggca acgagtactt gctggagctg ggcgagcaca tgctggagac 1381 gctggagttc agcgccaaga ccaagtgcgg ctatgcaacg atccgcaacg ttgtcaccca 1441 cgagaaggag aaccgcatgg agtcgttctt cctggcggag accagcaagt acctgtacct 1501 cctgttcgac gaggacaact tcctgcacaa cgacggctcc ggcggggagc tgcagtccac 1561 cgaggacgac gtgtgcgtcg tgcaggcggg cgcctatgtc ttcaacacgg aggcccatcc 1621 catggacatg tcggccctcc actgctgcca cgcccaccac gaggacatat acgcctcgct 1681 ggacctgcag cgcttcactc cgcgggcgat cttcgagcgg agcagggagc ggcaggtggc 1741 ggcgcaggag cagtgggtgc cgcagtgcca gccggagagc cacgagcact tctacaagga 1801 gcaggagagt gtccaggggc aggaggctgg ccgggagcag ggcgccagca ccaccatggc 1861 cgtggacatc gaggtgttcg atgagttcca gcagcccgcc ggcgacctgc tggtgagcaa 1921 cttcgagcgg attcgcgagg agcgggagct caacgagagc ctgcagagga gcgaggtgcc 1981 gcgcaaccag ttgaccgtca gcgacctgga cgagttcttc gcccagcgac gggagaactt 2041 cggcagcgcc gccgaggccc tcaactacgt gctcgccttc atgggcaact acaccatgga 2101 cgtggccttc atccggggcc tgcagctgta caatgccaac atcagcggag tgctgggcac 2161 aggcgcccag aaggagtacg agtcgcgcat gcgatccctc tggcagctgt acgaactgga 2221 gcagcagtac gcggccaaca tccggctgat ccagggcctg ggcctgctgg ccatccaggc 2281 ggacagcgag cggatgcgcg gctacttggc cgaggtgctg gacagcctgg acaggccgga 2341 tctgcaatct ccggccaatg cctcctcctc gtcccagttg ggtggcataa gggaagttat 2401 cctgagggcg cgccatgcct atgccatggc catggtgaac accacggcca tgcaggagtt 2461 cgccatccgc atctacctca gcggcacctc ggaggccggg gtgcgcattc acccgctgct 2521 ggagcccgag gaactgattc gcgaggagcg gctgaggcca ctgaaggcgg ccgaggagcg 2581 gagcctcttc agctacgccc gccgcatagt ggactttcgc aagcgcatgg cggagacggt 2641 ggaccgcctg cagacgctca tgcaggacgt acccgcagcg aagagtaaag aggccgctga 2701 gtcggattct caggttgcag gggcggatgc ggatgcgtcc acggtctacg ctcaaaccga 2761 ggccaaagag gcggcgaagg cacagcagca gcagcagcag gatcagaagt tgcagaagga 2821 gaagctggcg gaggagggct ccggctccgg gcaagaggag tccggctccg tgtggtcgca 2881 gttcgtgcag accattctgc gcaagacgac cgtgcagcgg gtcaagttcg acgaggccgt 2941 tctgctggag aagacgcgca aggcgctgga gaagcacgcc cacaaggagc tgccccacca 3001 cctgttcgcc tgccaccggc cggagtacat cgagggcttc gcctaccggg acttctatcc 3061 ggaggcgctc tagttcccca actaaactcg actgatctgt agatatatat gtatagttag 3121 tgaaggggta ttcgctctgt gagggttaat atagttaatt ctcaaggagc actcattggt 3181 tttggagcat gcaaatatac ctcaacctcg ctagagaact gtcatctcat agggttccct 3241 agaatgttac cgatcattat agttttagta ctggacatag tatttagttt ttcgacatgc 3301 ttttattgtt gttacgcaaa tatactcagt tcaatgtgaa atccaactga gaactggtgc 3361 cacgattctt tatatttaaa aaacaagtta aaaaagataa gcaaagaaaa tgtagcggga 3421 aataatggtt ttaaaggtgt aattgattag attttaaatc gtaaagtcaa gttggattta 3481 caaccttaat ccttaaaccc tattttaaag accaagtgcg aatacccctt cagcgtgccg 3541 aacgtcaagt ggctccactt gctccggcaa ttaatttatt aatatatact tagatcccca 3601 attttttttc gtggttcacc caagacatta ccaaggctta tacatattta tatctataat 3661 aatcccattt gggatccgtg tgtctgcgtg tgcgtgtaaa ctatttgcaa tgactgttgt 3721 tggctgtatt gtaattaaat tgatttattt ccgta