Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017151181 2146 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017151181 VERSION XM_017151181.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151181.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2146 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2146 /gene="rush" /note="rush hour; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063901" CDS 751..1683 /gene="rush" /codon_start=1 /product="pleckstrin homology domain-containing family F member 1 homolog" /protein_id="XP_017006670.2" /db_xref="GeneID:108063901" /translation="MVDRLVNSEANTRRIASVESCFGSSGVPLAMQGRVLVGEGVLTK MCRKRPKSRQFFLFNDILVYGNIVIGKKKYNKQHIMPLEEVSLESIADNQAYRNGWYI RTTTKSFVVFAATSTEKQEWMAHINKCVEDLLRKSGKKPVENHAAVWVPDTEASVCMH CKRTQFTFIQRRHHCRNCGAVVCAGCSSKKFLLPQQSTKALRVCDACYERLKQVPSSE DSGASAAAAAGGNKLNTTAGDSSNDEDSDEETASPGGESHDEPRFYGDNSVLSAADDS STIASPSSATSEAPPGVQGVQSTPAAVATMGSNC" misc_feature 769..1137 /gene="rush" /note="Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain; Region: PH_Phafin2-like; cd01218" /db_xref="CDD:269927" misc_feature 1192..1374 /gene="rush" /note="FYVE domain found in protein containing both PH and FYVE domains 1 (phafin-1), 2 (phafin-2), and similar proteins; Region: FYVE_PKHF; cd15717" /db_xref="CDD:277257" misc_feature order(1195..1197,1204..1206,1261..1278,1282..1287, 1354..1362) /gene="rush" /note="putative phosphatidylinositol 3-phosphate binding site [chemical binding]; other site" /db_xref="CDD:277257" polyA_site 2146 /gene="rush" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 catctgagat attacaactt gttagttaaa agtacacgaa aacagtgaaa attgtgcctt 61 gtttccccct tcgagtgccc actgtaggcc gttacgtttg aaactggctc gccctcgcgc 121 agtgcggtgt tttgcaacac tagttcggtt cggttcgcgg tattaagtcg cgatccgtgt 181 gcggtcacac tgcgctctgg gaaaaataac gtatttgctg gccaaccgtt gttgttgttg 241 cccccgcttc ctgcagccga ggaacgaaac taaaacaaaa gattgcaata gagatctcga 301 tctccaagcg ccaccagttg cccagtgccc agtgcccaag gaagccaccg attcccaggg 361 agcagcagaa agagagagcg agagaggaga ggagagcccg agttcagttt gtttttgttg 421 ctgccgtggt gtgagtgagt catgacgttt cggactcgga cggcgtagaa aaagccagtt 481 aaccagttga gcagttgggc gacgtgcatt gcataaagcg ggagcagtcg gatccattgc 541 attccaggat ctgaaaggtg atccccgaca ggaggagcag ggagaacagg aggagcagcc 601 cacacacgca cacttgcaca ggagcagtgg caccgagtgt cacaccacac acgcacacct 661 acaggccgat acagcacaca cacactcaca cagagagtct gtcgtcacag ttggctgctc 721 ttcgaaattc gaaattcgga gttcagaata atggtggacc gcctggtgaa ctcggaggcc 781 aacacccggc gcatcgcctc cgtggagagc tgcttcggca gctccggcgt cccgctggcc 841 atgcagggcc gcgtcctcgt cggcgagggc gtcctgacca agatgtgccg gaaaaggccc 901 aaatcccggc agttcttcct cttcaacgac atcctggtgt acggcaacat cgtgatcggg 961 aagaagaagt acaacaagca gcacatcatg ccgctggagg aggtctcgct ggagtcgata 1021 gccgacaatc aggcgtaccg gaacggctgg tacatccgca ccacgaccaa gtcgttcgtg 1081 gtcttcgcgg ccacgagcac cgagaagcag gagtggatgg cgcacatcaa caagtgcgtg 1141 gaggacctgc tgcgcaagag cggcaagaag ccggtggaga accacgccgc cgtctgggtg 1201 cccgacaccg aggccagcgt ctgcatgcac tgcaagcgga cgcagttcac cttcatccag 1261 cggcggcacc actgccgcaa ctgcggcgcc gtcgtctgcg ccggctgctc ctcgaagaag 1321 ttcctgctgc cgcagcagag caccaaggcg ctgcgcgtct gcgacgcctg ctacgagcgg 1381 ctgaagcagg tgccgagcag cgaggactcg ggcgcctccg ccgccgccgc cgctggaggc 1441 aacaagctca acaccacggc cggcgacagc tccaacgacg aggactccga cgaggagacc 1501 gcctccccgg gcggcgagtc gcacgacgag ccgcgcttct acggcgacaa cagcgtgctc 1561 tccgccgccg acgactcctc gacgatagcg tcgccctcct ccgccacctc agaggctccg 1621 ccgggggttc agggcgtcca gagcacgccg gctgccgtgg cgacgatggg cagcaactgt 1681 tgagcggacc acacagcaag tgattatgca agacgaacaa cggaagcgat gcgagcagga 1741 ggagatcaag gagatacgca agatgaccct tttcaaggcg cgtcccaatc catttaaata 1801 gtgctcgagg gagaaccagg cgacgactac caaaaacatt tgattctgtc caaatttcga 1861 atgatgtaaa gtcgccgctc tgcaacatta acgtgtccac acacatagtt ttaccacatt 1921 aacactattt ttgtctctaa cattcatttt acgcctattt cgtttccttt tctggcggat 1981 ggaccactga agaaaccact aaaatcgtat gtttggcgtt tggcgggagg atttaactat 2041 atggatatgt atacaatata agcaatttgc aattgcgatc attaactgtt ttctatatgt 2101 acaaagccga aaaaaacaat aaattaatac tgtaaattga acaaaa