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LOCUS XM_017151173 3261 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_017151173 VERSION XM_017151173.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151173.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3261 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3261 /gene="fend" /note="forked end; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063894" CDS 783..1688 /gene="fend" /codon_start=1 /product="transmembrane protein fend isoform X1" /protein_id="XP_017006662.3" /db_xref="GeneID:108063894" /translation="MFHSLVLMACALAAFSFAQEAGPPRSKSLSASVSSPGADPTSPA PALTAAPLASSKQLNRCRQSCYQQLSKDWHYCKDSVDCTNCCQKLVAPFELRILKAQR QESLVLTDIGWDEMIANASRQCLITWEVSGGGLIGNLLTDTARAELSLWPDTVYNIQV KCKHKLTGLMRRSIKLNVDTTQLVGTTTTTTTRAPSTLRSQEQTSPSEDHPDPLMHSQ RVHIRPTDRVYIISALPTPSELGGVVYPAFGALAFFLALLVMFLFLRPQRKRFPLDAD SADTATLIGRNSCSRNSLDASTLHV" polyA_site 3261 /gene="fend" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attccgtttt taaccctcga cggatttggt tgttccccgg aattgaattc gaaataaaaa 61 tttcgcacac atcgcgtata cattatattt ttgttcttcg tcttccgtgt gtgtggtgtg 121 cgtttttgtt attgccgtcg tctttttcgg gtgtatattt aacaaacgtt acaattacat 181 attttttttc acgtgtccta ctgttatact gccagtgtat gtacttacgg tacttggtgc 241 ttggtactca aataacaaag tcaaacaaat aaaagcaagt aaagaggaca ccgaaaaaga 301 gaaacaaaaa caaaaataaa taaaagagtc gctttgttgt tgtcgcgcag catgtggagc 361 tacagttaac tgtaacagtt aaaggggagc acaaggagga ggagtgggcg aaagagaagg 421 aggaggggga gaagcaaaag acaggattta ctgctccgct tgactaaatg cagtcgacgc 481 tgcgattatt atgtgccagc cccaacaaca acaaccacac ttgatacgaa aataaacaaa 541 caaaatcaat caattaatca atctgctgag cacaccgctc tccacgccca cactcccaca 601 ctaacaaaca cacgcgcaaa aacacacaac aaaacacaca cgagtcaacg cccacgccca 661 ttgaaaaagg agaaaaggag ggagtggcag gacaacaaca agaaaggagg agaaaggagc 721 agaggcagag agcacaagaa cagccaggca aaaggcaaaa agaggacgtt aaagaagaca 781 acatgttcca ctcacttgtt ttgatggcct gcgcccttgc cgccttctcc ttcgcccagg 841 aggcggggcc cccgcgatcc aaatcgctat cggcatcggt atcgagtcct ggagcggatc 901 caacctcccc cgcccccgcc ctcacggccg ctccccttgc cagcagcaaa cagctgaaca 961 gatgccgtca aagctgctat cagcagcttt ccaaggactg gcattattgt aaggattccg 1021 ttgattgcac aaactgctgc caaaagctgg tggcaccttt tgaactgagg atcctgaagg 1081 cccagcgcca ggaatcgctc gtcctaacag acatcggctg ggacgagatg atagccaacg 1141 cctcgcgcca atgcctcatc acctgggagg tctccggcgg cggcctgatc ggcaatctgc 1201 taacggacac cgcccgggcg gaactatccc tgtggccaga caccgtctac aacatccagg 1261 tcaagtgcaa gcacaagctc acgggcctga tgagacgttc gattaaactg aacgtggaca 1321 ccactcagtt ggtgggcaca accaccacga ccacgactag agctccgagc actctgagga 1381 gccaggagca gacatcgcca tccgaggacc atccagatcc cttgatgcac tcgcaacgcg 1441 ttcacatccg acccacagat cgagtgtata taatcagtgc cctgcccact cccagcgaac 1501 tgggcggagt ggtgtatcca gccttcgggg cgctggcctt cttcctggcc ctgctggtca 1561 tgtttctctt cctgcgcccg cagcggaagc gcttccccct ggatgcggac agtgcggaca 1621 cggccacgtt gataggtcgg aactcatgct ccaggaactc actggacgcc tccacgttgc 1681 atgtctaagg aggcgaaact tgtagtcgta tatatataga tgtctgacta tgtgatattc 1741 tgcaccccaa aaaagggccc ccaaagggac gcgaagacaa ctgtgtacat aacctcatta 1801 acgcgttagt tagacccccc gcccattccc gagatagtaa ccccagattc tgcggttcga 1861 tataatgata gattaatcga attggaaaga aagtcaagca acgttcgctc aactaagttt 1921 aagttttatc gtctgccatt cgtagatccc aatgccaaac cagcgcagtc atatatacac 1981 gcatgattaa cgtacatagc tctatataca tataccaact atattataca cttaacgcat 2041 ttactatata cataatatat atcatagtta tacagacgca gctaaagata caagtgcaga 2101 tcaagatgca gatacgttta cggttacgga tataaatata tatatatata tattatatat 2161 tatattatta cattatatta tattatatta tattatatta tataatagac taggggccag 2221 cggccaacca actacataca ccaaactaaa tgcaacaaat tgctacaaat tttttgtcaa 2281 tcgtcgtcgc tcgcttgcaa acatacaaac aaacaaaaaa tcgaaataac ttgagataaa 2341 accaaatgaa aaccaattaa tacaaataca aaatatcatg catctctttt ccattttttg 2401 tcgtctttaa acttaaatga aatatagttc ataaatggaa aaccaaataa aacgaaaaaa 2461 aggaataaaa accacttaaa tcaaaagtaa atatttttca aaatttttaa atgtttatac 2521 ctagacaaac tcaattgaat taacaacaaa gtaaactatt ataactgact tactgtactt 2581 gagaatgtaa aaacaaagta actaattaaa ctaaaccatg gtaaatacgg ttaattaaag 2641 atctaagctg agaaaacttc gctacgcaaa atgcctgtaa atattttagc cctaatttat 2701 ttatatttaa agatcgattg ttttgttaac ctatgatttt aaggaggccc cagaaaaatg 2761 aagggatttc caggggaaaa aatatggttt cttaaattca aagaatgtaa ttttttttta 2821 gaaaataaag aactacttta tatgattaat ggagtgttcc taattttagt gtttctaata 2881 tgtaaaaaag tatgctttca atgtctgctc caatggttgt agtatgaatt agtgtctttc 2941 gatgtacttc ccaatccatt ttaatgaaac ccaaccaatc tttcccaaaa tggaatctct 3001 ggagtgagaa ctttgtagag tctgaaccga ttgccatata taatacagtc ctagtttaat 3061 tttagttttt agatccaatt gtgttacctc tttttttctg tggcaaagac tcgttaagac 3121 taaatatgcc aatcacattt tagatatata tactgtgtat gaataaattc ggagagaagg 3181 atggaagcgg aagtgcggta ccctttcaac atttatcctt tattcgttta ttatgtaaat 3241 ataatttgat ttgttattgc a