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LOCUS XM_017151166 2064 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017151166 VERSION XM_017151166.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151166.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2064 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2064 /gene="deltaCOP" /note="coatomer subunit delta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108063891" CDS 164..1768 /gene="deltaCOP" /codon_start=1 /product="coatomer subunit delta" /protein_id="XP_017006655.1" /db_xref="GeneID:108063891" /translation="MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGK QHTYVETDSVRYVYQPMEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEI VENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQTQEREARQKMR EKAKELQRQRMEASKRGGPSLGGMGGRSGGFSADSFGSSGVSSGGSGGGGSSASIGIT SIDVDTKSKAAAKPTSRNALKLGGKSKDVDSFVDQLKSEGEKIANLAPAAPAGSSSAA ASASAAAKAAISADIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRIADEAYGR ILLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQD ESAIPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPMNVQPSVAEYDGT YNYDARKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQD VVQVDSEAAVKYSSESILFVEKYEIV" misc_feature 173..562 /gene="deltaCOP" /note="delta subunit of the F-COPI complex, N-terminal domain; Region: Delta_COP_N; cd14830" /db_xref="CDD:341434" misc_feature 1043..1756 /gene="deltaCOP" /note="Mu homology domain (MHD) of adaptor protein (AP) coat protein I (COPI) delta subunit; Region: AP_delta-COPI_MHD; cd09254" /db_xref="CDD:271162" polyA_site 2064 /gene="deltaCOP" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acattttgtc gcagaaccga acacgtcagc tacgcggatt gattgaaaac cagctttccg 61 agcgccccgc aactccgatc cgtagcagca gaccatcctg cgccgtccgc atccgatccg 121 ccaagtattt acccagggcc caaacgtcga gagcagctgc aaaatggtac tcattgctgc 181 ggctgtttgc acgaagaatg gcaaagtgat tctgtcacgt cagttcgtcg agatgacgaa 241 ggcacgcatc gagggactgc tggccgcctt ccccaagctc atgaccgctg ggaagcagca 301 cacctacgtg gagacggact cggtgcgcta cgtctaccag ccgatggaga agctctacat 361 gctgctcatc accacaaagg ccagcaacat cctggaggat ctggagacgc tgcgtctctt 421 ctcgaaagtg atccccgagt acagccactc gctggacgag aaggagatcg tggagaacgc 481 cttcaacctg atcttcgcct tcgacgagat cgtggccctc ggctacaggg agagcgtcaa 541 cctggcccag atcaagacct tcgtggagat ggactcgcac gaggagaagg tctaccaggc 601 ggtgcggcag acgcaggagc gcgaggcgcg ccagaagatg cgcgagaagg ccaaggagct 661 gcagcggcag cgcatggagg ccagcaagcg gggcggcccc tcgctgggcg gcatgggcgg 721 ccgcagcggc ggcttcagcg ccgacagctt cggcagcagt ggcgtgagca gcggcggctc 781 cggcggcggc ggctccagcg cctccatcgg cataacctcc atcgacgtgg acaccaaatc 841 caaggcggct gccaaaccaa cttcgcgcaa tgccctcaag ctgggcggca agtccaagga 901 cgtggacagc tttgtggacc agctgaagag cgagggggag aagattgcca acctggcacc 961 ggcggcgccc gccggaagct ccagtgctgc ggccagcgcc agtgcagcag ccaaggcggc 1021 catctcggcg gacattcaca aggagagcgt gcatctgaag atcgaggaca agctggtggt 1081 gcgcctggga cgcgatggcg gcgtgcagca gttcgagaac tcgggcctgc tgacgctgcg 1141 catcgcggac gaggcctacg gccgcatctt gctcaagctg tcccccaacc acacacaggg 1201 cctgcagctg cagacgcacc ccaacgtgga caaggagctc ttcaagtcgc gcaccaccat 1261 cgggctgaag aacctgggca agccgttccc cctcaacacc gacgtgggtg tgctcaagtg 1321 gcgcttcgtc tcgcaggacg agtcggccat tccgctaacc atcaactgct ggccatcgga 1381 taatggagag ggcggctgcg acgtgaacat cgagtacgaa ctggaggcgc agcagctgga 1441 gctgcaggac gtggccattg tcattccctt gccaatgaat gtccagccat cggtggccga 1501 gtacgacgga acctacaact acgatgcacg caagcatgtg ctccagtggc acatccccat 1561 catcgatgcc gccaacaagt ccgggtccat ggagttcagc tgcagtgcct ccattccggg 1621 cgacttcttc cccctgcagg tgtccttcgt ctcgaagacg ccgtacgcgg gcgtcgtggc 1681 ccaggatgtg gtgcaggtgg acagcgaggc ggcggtcaag tattcgagcg aatccattct 1741 gttcgtcgag aagtacgaga tcgtgtaggc cgcggccgcg ccccctggcc acgcccacct 1801 aagtagtaca taaacatata cctagaaatc cattattttc cggggcttcg attcgatacg 1861 attgattcaa ctgctgcagc atgttaaaga ttatttttat atatgtttcg aactttggat 1921 atttatggcg cgccaacagc ttctcagagc aagtaatttc aagcaaattg cagaaaatca 1981 tcaaaaccaa ttaattaaac taattttgtg cactccaagc gctgcgtata acggtatata 2041 ataaatgaaa ggcaattagt tgta