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LOCUS XM_017151158 4393 bp mRNA linear INV 09-DEC-2024 (LOC108063885), mRNA. ACCESSION XM_017151158 VERSION XM_017151158.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151158.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4393 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4393 /gene="LOC108063885" /note="uncharacterized protein CG7065; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063885" CDS 483..4157 /gene="LOC108063885" /codon_start=1 /product="uncharacterized protein CG7065" /protein_id="XP_017006647.3" /db_xref="GeneID:108063885" /translation="MSFLPGEPVPPGFEEDDVAPTAVIVKQIESYSGGPLLGTEYAIE LHEPAQLRPDYFCVLCQTCTDGRSVFVHWTSQAHRTKYLKTHFQKAHEVLQRLKRTPN SSGDLVIATGNLVQAIENHFGRSRQLVTSSAEDFRRFRAKIFSQVRDSPHFDECTGHD FVEEAQRLLRELKPDESIKISLKMNEGGAAGGDSNNSKRDEGNNIISLDAISSDDDNF GGPSGPTVPKVTLRKKNLAEDASGRGVNRSPPPPGGVAKPQQLPTPKELSIQASLIAQ ERYKWEKFRCMLELQLKQLRDETETYESNPEKHPDYPDEWKQFWNRRYKQLQEEKKCD PNQYDYKPEWISYWKDRRIELFNIAVNKIKKDLKEKFKLGDEDEEKTKELMERYKIRV ASPREAPASANVVNRRKQNFRSNRPAGGGSGAGSGAPEAVIDISDDEGSSPPSRGRGP YNRRSPSHSLSPKRPGAGGRRPMRRSRSRSPRRNYRRGSSRSRSRSRSLRRRSRSPPY YRQRDRRGPASRERALSPGPRDYVDRGRSLERERSADYYPPRSEAYGRGPPRNYDHVE TFRVLDSRVYPEYNMPKVRSISPAVSSVKDKESSEIVEEGPLTVVSVLRMLSAVEEHL GSLGPKALNLLSKALAMEMAKPNAADDLLLNDDNCVFLETTKEKLKGILIAEVLDDPQ KVRVVKKLITNIAAIIFQVTARGVPDVAEAKVKANANPAPIQLPFERNVVAPKLANAL VLKGYYDVTTGDMNSLLHLLTLLVTVDKQRRQADKDNGLTFEEVQAKLGLQKEAPPDN MGIDLDELMKEVENQLNKESLDVATAAGGPEAASGKVQQDAAAVGGSNGMESLTDSDL QTLLQNFKFLSNEEQVHLIGHLRNLEVQEPSRVEHLRKYVNLAELSGDGESCSDFLSR VVNIGGVSAKTMEKSKSVAGASSGGAASGSASAMVALASLTTRRPSTDRERDRDRDRE MTSLPVSKQRRGRNTPSFMIDDDDDDEDDYNFDDLVMKACDWRGGGGGGGSKKAGAPI VPVESSPNALTFKPAAASKISLKDTESIIANLMGTLSKGGNSGGSSGSSEGNRMQQQH GAPNAPSMSQKPGQNPNPGQNHGYPPQQQGRNFGQEPQPLMSSMSGGPDPSQYPNQQP YGGYHPYAGGNGVQQNYAGMGHGPGPAPGHAGGYGGPINPWANNGPPQPPYNQMPQNF LGAQQQQPPPHYNNMFGGRH" misc_feature 2418..2516 /gene="LOC108063885" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276808" misc_feature <3735..>4139 /gene="LOC108063885" /note="ARC105 or Med15 subunit of Mediator complex non-fungal; Region: Med15; pfam09606" /db_xref="CDD:312941" polyA_site 4393 /gene="LOC108063885" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaaaaaagt tcccaaatat attgccgccc taaaatatca gtattttttt gtgtatccgc 61 tacgtcagga gggtgtctct actagtgcgt ggttttactg ccccagccgc aaatggtcac 121 actggaaagc aaacaaaaaa aaaggagagg aattttcgca gcaattaaag caaaaagcga 181 taaagggcgc tttaaaacgg atagttacat gccttaggtt gcgactatcg actacacaaa 241 gtaagtaatg gtaactccgc tggcgaaagc caccctcgtt tgaaaaactt gcgacaagcg 301 tgaagttgaa cacggtagtg caaaagtgtg aagaagaaga aagtccgggg cttcgttggg 361 aaaagcgaac caaagccaaa caaaaaaata tagaatctcg ggatccggaa gcggacacga 421 aggcggggac ttggacacag ggtccgattc cgtttccagt ttaagtcgcc gattaagtcg 481 ccatgagttt tctgccgggg gagccggttc ctcccggctt cgaggaggac gacgtggccc 541 caacggcggt catagtgaag cagatcgaga gctacagcgg cggcccgctc ctcggcaccg 601 agtacgccat cgagctgcac gagccggccc agctgcgtcc ggactacttc tgcgtgctgt 661 gccagacctg caccgacggc cgcagcgtct tcgtccactg gacgtcgcag gcgcaccgca 721 ccaaatacct gaagacccac ttccagaagg cccacgaggt gctgcagagg ctgaagcgca 781 cgcccaacag ctccggggac ctggtgatag ccaccggcaa cctggtccag gccatcgaga 841 accacttcgg ccggtcccgc cagctggtca cctcgtccgc cgaggacttc cgccgcttcc 901 gggccaagat cttcagccag gtgcgggact ccccccactt cgacgagtgc accggccacg 961 acttcgtcga ggaggcccaa cgcctcctgc gcgagctgaa gccggatgag tccatcaaga 1021 tcagcctgaa gatgaacgag ggcggagccg ccggcggcga cagcaacaac agcaagcgcg 1081 acgagggcaa caacataatc tccctggacg ccatctccag tgatgacgac aactttggcg 1141 gtccctcggg gcccacggtg ccgaaggtga cgctgcgcaa gaagaacctg gccgaagatg 1201 ccagtggccg cggagtgaac cgctcgccac cgcctcccgg cggagtggcc aagccccagc 1261 agctgcccac gcccaaggag ctgtccatcc aggcctccct gatcgcccag gagcgctaca 1321 agtgggagaa gttccgctgc atgctggagc tccagctgaa gcagctgcgc gacgagacgg 1381 agacgtacga gtcgaacccc gagaagcacc cggattatcc ggacgagtgg aagcagttct 1441 ggaaccgccg ctacaagcag ctgcaagagg agaagaagtg cgatcccaac cagtacgact 1501 acaagcccga gtggatcagc tactggaagg accggcgcat cgagctgttc aacatagcgg 1561 tgaacaagat caagaaggat ctcaaggaga agttcaagct gggcgacgag gacgaggaga 1621 agaccaagga gctgatggag cgctacaaga tccgcgtggc cagtccgcgg gaggcgccgg 1681 ccagcgccaa cgtggtcaat cgtcgcaagc agaacttccg cagcaatcgg ccggcgggcg 1741 gaggatcggg ggcagggtca ggggcacccg aggctgtcat tgacatcagc gacgacgagg 1801 gctccagtcc gccttcccga ggtcgtggcc cctacaaccg gcgctccccc tcccactccc 1861 tctcccccaa gaggccagga gcaggaggcc gtcgtcccat gcggcgttcc cgcagccgct 1921 cgccgcgccg caattaccgg agaggttcct cccgctcccg ctcgcgttcc cgcagcctgc 1981 ggcgcagatc ccgctcgccg ccctactacc ggcagcgcga tcgtcgcggt ccggcctccc 2041 gggagcgggc cctgtcgccc gggcccaggg actacgtgga tcgcggccgc agcctggagc 2101 gggagcgctc cgccgactac tatccgcccc gcagcgaggc ctatggccgc gggcccccgc 2161 gcaactacga ccacgtcgag acattccgcg tcctggactc gcgcgtctac cccgagtaca 2221 acatgcccaa ggtgcgctcc atctcgccgg ccgtctcgtc cgtcaaggac aaggagtcct 2281 cggagatcgt cgaggagggc ccgctgaccg tggtcagtgt gctgcgcatg ctctccgccg 2341 tcgaggagca cctgggcagc ctggggccca aggcccttaa cctgctcagc aaggcgctgg 2401 ccatggagat ggccaagccg aacgcggccg acgacctgct gctgaacgac gacaactgcg 2461 tgttcctgga gaccaccaag gagaagctga agggcatcct catcgccgag gtcctcgacg 2521 acccgcagaa ggtgcgcgtg gtgaagaagc tgatcaccaa catagcggcc atcatcttcc 2581 aggtgaccgc cagaggtgtc cccgatgtcg ccgaggccaa ggtgaaggcc aacgccaatc 2641 cggcgcccat ccagctgccc ttcgagcgca acgtggtggc ccccaagctg gccaacgccc 2701 tggtgctcaa gggctactac gacgtgacca ccggcgacat gaacagcctg ctgcacctgc 2761 tgacgctgct ggtgacggtg gacaagcagc gccgccaggc ggacaaggac aacggcctga 2821 ccttcgagga ggtgcaggcg aagctcggcc tgcagaagga ggcgccgccc gacaacatgg 2881 gcatcgacct ggacgagctg atgaaggagg tggagaacca gctgaacaag gagtccctgg 2941 acgtggccac cgctgccggc ggcccggagg cggccagtgg aaaggtccag caggacgccg 3001 ctgctgtcgg cggcagcaat ggcatggagt cgctcaccga ctcggacctg cagaccctgc 3061 tgcagaactt caagttcctg tccaacgagg agcaggtgca cctcatcggc cacctgcgca 3121 acctggaggt gcaggagccg tcgcgcgtgg agcacctgcg caagtacgtg aacctggcgg 3181 agctgagtgg cgacggcgag tcctgcagtg acttcctgtc gcgcgtggtg aacatcggcg 3241 gtgtgtcagc caagacgatg gagaaatcca agtcggtggc aggcgcctcc tccggggggg 3301 cagccagcgg ttccgcctcc gcgatggtag ctctcgcctc gctgaccacg cgccgtccca 3361 gcacggatcg cgagcgggat cgggaccgcg atcgcgagat gaccagcctg cccgtcagca 3421 agcagcgacg cggccgcaac actcccagtt tcatgatcga cgacgatgat gacgacgagg 3481 acgactacaa ctttgacgat ctggtgatga aggcctgcga ctggcgtggt ggtggtggag 3541 gtggcggctc caagaaggcg ggagcgccca ttgtacccgt ggaatcctct ccgaatgccc 3601 tcactttcaa gccagcggct gcctcgaaaa tctcactgaa ggacaccgaa agcattatag 3661 ccaacctgat gggcacgctc agcaagggcg ggaattcggg gggatcgagt ggctcctcgg 3721 aaggcaaccg catgcagcag cagcacggag cacccaatgc gcccagcatg agccagaagc 3781 cgggacagaa tccgaatcct ggccagaatc acggctatcc gccgcagcag cagggccgca 3841 actttggcca ggagccgcag cccctgatga gcagcatgag cggcggaccc gatcccagcc 3901 agtacccgaa tcagcagccc tacggcggct atcatccgta cgcgggcggc aatggagtgc 3961 agcagaacta tgcgggcatg ggacacggac caggacctgc tcctggccac gccggcggct 4021 acgggggtcc cattaatccc tgggccaaca acgggccgcc gcagccgccc tacaatcaga 4081 tgccccagaa cttcttgggc gcccagcagc agcagccgcc gccgcattac aacaacatgt 4141 tcggggggcg tcactagagc cactaagtcc tagatactag acctaatatt aaatcatgag 4201 gatttaaaca tagactaaag accatgaaca tccattgaag tgcccgtgaa tgcgcgtagt 4261 gatttattaa cataaaacct tttttttttg tcaccttttt tcccccgtct acagctgaat 4321 tatacaaatc ggaaggtatt caacgcatta attatatctg aacagcaaaa gaataaagaa 4381 acgcaaatgt taa