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LOCUS XM_017151157 1781 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017151157 VERSION XM_017151157.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151157.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1781 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1781 /gene="Tsp3A" /note="Tetraspanin 3A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108063884" CDS 217..1131 /gene="Tsp3A" /codon_start=1 /product="tetraspanin-33" /protein_id="XP_017006646.1" /db_xref="GeneID:108063884" /translation="MSNYRYQGGGIGGGGVAGGRGYSGIEVHEVMHPHHFTYVSQCVK YMIFLLNFMFWLFGGLLLGIGIYAFKDKWEEANGSVRLENFYDVFLNISLVMILAGMV IFLVSFFGCLGALRENTFLLKAYSVCLLLFFLLEMAIAIICFVCPQYMNTFLEKQFTD KIIHSYRDDPDLQNFIDFAQQEFKCCGLSNAGYQDWSKNEYFNCSSPSVEKCGVPYSC CINATDISSGLVNIMCGYGVQETQVPEARKRIWTSGCIEVMRIWAEHNLYVIAGNALG IALIQLLVIYLAKTLEGQIELQKSRWAA" misc_feature 343..>777 /gene="Tsp3A" /note="Tetraspanin family; Region: Tetraspanin; pfam00335" /db_xref="CDD:459767" misc_feature 646..1017 /gene="Tsp3A" /note="Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment...; Region: penumbra_like_LEL; cd03158" /db_xref="CDD:239411" misc_feature order(649..651,664..666,676..678,682..684,688..690, 697..699,739..741,748..753,760..765) /gene="Tsp3A" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:239411" polyA_site 1781 /gene="Tsp3A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttaatcgtcg caaccatcgt cgattgtttt cattgtttgt aattacacat ttcgtttcgc 61 ttttcgtaaa ttaataacta aatacagaga ttagtcgcga ttaactagac ggatgaataa 121 taagtaacac tgccaaagct gtgaaaagag actgcgcttt aattggagta atataaaagt 181 gaaatcgggt atataaagac gagtacagat aaacagatga gcaactaccg ttatcagggg 241 ggcggcatcg ggggcggggg cgtggccggg ggacgcggct acagcggaat cgaggtgcac 301 gaggtgatgc atccgcacca cttcacctac gtgagccagt gcgtcaagta catgatcttc 361 ctgctgaact tcatgttctg gctgttcggc ggcctgctgc tgggcatcgg gatctacgcc 421 ttcaaggaca agtgggagga agcgaacggg tcggtgcggc tggagaactt ctacgacgtc 481 ttcctcaaca tctcgctggt gatgatcctg gccggcatgg tcatcttcct ggtcagcttc 541 tttggctgcc tgggcgccct gcgcgagaac accttcctgc tgaaggccta ctccgtctgc 601 ctgctgctct tcttcctcct ggagatggcc atcgccatca tttgcttcgt ctgtccgcag 661 tacatgaaca cctttctgga gaaacagttc acggacaaga tcatccactc gtatcgcgac 721 gatccggatt tgcagaactt catcgacttt gcccagcagg aattcaagtg ctgtggtctc 781 agcaacgcgg gctaccagga ttggagcaaa aacgagtact tcaactgcag ctcgccgtcg 841 gtggaaaagt gcggagtgcc ctacagctgc tgcatcaatg ccaccgatat atcctccggc 901 ctggtgaaca tcatgtgcgg ctacggcgtc caggagaccc aggtgccgga ggccaggaaa 961 cggatctgga ccagcggctg catcgaggtc atgcggatct gggccgagca caatctgtac 1021 gtgatcgccg gcaatgctct gggcatcgca ctcatccagc tgctggtcat ctatttggcc 1081 aagacgctgg agggccaaat cgagctgcag aagtcgcgct gggcggcgtg agatccggga 1141 ctgcccgaat tttacgggcc ctacgatcac acctgaacta agcacactct cagaattcct 1201 agttttatac acgtaccact tgtaccactc aaaggactgt caaaactcat aatccagagg 1261 gagtaacagt ccttaagtga tggttctata ttccaatttt atttttattt cttttggtct 1321 ttgcttactt aaagaatttc cactgtgcaa tattcatttt gaacttttct caaaagccaa 1381 aagaacaatg aggtattact cgatgagatt taaggtatac cattgatttt ggaattttaa 1441 cttttagtct ctaatatttg tattttaatc gactacacct acaattgctg tatataccca 1501 tacatattta caccttttgt gaactcatct caaacacata atgtactcac gatgctcatc 1561 ccaatccgac caaacaacgc catattacgt ttggccagtg aataacttgc gaaatctcgg 1621 tgcatttatt tatacgcaat gcatttctag tgaaaaacaa taaccaacaa ggagcacaaa 1681 tcttgaatat ctagacatca tagcaatttt taaatgtatt attaatctag aaccctaaaa 1741 ctgtagactt atgataataa aagacaaaat ataaagtgag a