PREDICTED: Drosophila takahashii lipid droplet biogenesis

LOCUS       XM_017151156            1902 bp    mRNA    linear   INV 09-DEC-2024
            associated protein seipin (Seipin), transcript variant X1, mRNA.
ACCESSION   XM_017151156
VERSION     XM_017151156.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017151156.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1902
                     /gene="Seipin"
                     /note="lipid droplet biogenesis associated protein seipin;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:108063883"
     CDS             363..1487
                     /gene="Seipin"
                     /codon_start=1
                     /product="seipin isoform X1"
                     /protein_id="XP_017006645.1"
                     /db_xref="GeneID:108063883"
                     /translation="MNFLLRFVVFCLDPLGLGRRFLIRPALNLGWNVYDRVRSKADEK
                     VGTVRELVLRLGLIAFAVVLIIWLAVFMYAAFYYVYMPAISHTRPVHMQFKTCLETST
                     PCTFPHAHVSLTKKQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYDSMLR
                     GHSCRSAMMRYRSPLIRMISTWALSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDV
                     YVEIQSQKIQFYTVTLHIVADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLLSWYH
                     WSDAKWLHSVQIKYARLTKSLEPGVVRASSKASSLRDDDDDLLAYGDKSDIADVGGDT
                     LSDVDAEADDLVLVKKSASGKTDSQDALRKRHGKKTTADH"
     misc_feature    606..1088
                     /gene="Seipin"
                     /note="Seipin and similar proteins; Region: Seipin;
                     cd23993"
                     /db_xref="CDD:467827"
     polyA_site      1902
                     /gene="Seipin"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttagttaga ttagtgtcaa ctaggtaata tcaggttcca agttttgcaa tacaactact
       61 cgaatttata aactatcttg gagctgtctt aaaaataagc tcatcttgtg ttggccagtg
      121 taaaccgaaa atcgttttgg ctctgacctt tgagccggta caacgtctgg atttctggat
      181 cgtggatgga tcggatcgcc gctatagcac tatatatgaa tcagccgata gagcgcctat
      241 gcaaatctcg gggagcgggg aagagggaat cgataagcga ccggtgctga tagcacgaat
      301 acaaaacact tagctcactt aattgctgct acactcggtg tacaccagtt cccagttcca
      361 ccatgaactt cctgctgcgc ttcgtggtct tctgcctgga ccctctgggc ctgggccgcc
      421 gcttcctcat ccgcccggcc ctcaatctcg gctggaacgt gtacgatcgt gtccgcagca
      481 aggccgacga gaaggtgggc accgtgcggg agctggtcct ccggctggga ctcatcgcct
      541 tcgccgtcgt cctcatcatc tggctggcgg tcttcatgta cgccgccttc tactacgtct
      601 acatgccggc catatcgcac acacgacccg tccacatgca attcaaaacc tgcctggaga
      661 ccagcacgcc ctgcaccttc ccgcacgccc acgtctcgct gacgaagaag caacagctgc
      721 tgatggtggg ccaggcctac aaggtgatcg tgaacatcga catgccggag tcgccgcaga
      781 acctggagct gggcatgttc atggtgtgcg ccgagatgcg ggactacgac tcgatgctcc
      841 ggggccactc ctgccgctcg gccatgatgc gctaccggtc gcccctgatc cgcatgatct
      901 ccacgtgggc gctgagtccg ctgtacgtgc tcggctggaa ggaggagttc cagcaggtgc
      961 ccgtggagat attctcgcgc tacctggagg agcggcagca tcccatcacg gatgtctacg
     1021 tggagatcca gtcgcagaag atccagttct acacggtgac cctccacata gtggccgatt
     1081 ttaccggtct gcggtacatc atgttcaact ggcccgtgct gtcggccata gtggccatta
     1141 gcaccaatct attctttata ctggtcgtct ttctgctcag ctggtaccac tggtccgacg
     1201 ccaagtggct gcacagcgtg caaatcaagt acgcccggct cacgaagtcg ctggagcccg
     1261 gcgtagtccg cgcctcctcc aaggcgagca gcctgcggga tgacgacgat gacttgctcg
     1321 cctacggtga caagtccgac attgcggacg tgggcggaga cacactgagc gacgtggatg
     1381 cggaggcgga tgatctggtg ctggtcaaga agtcggccag tggcaagacg gactcccagg
     1441 atgcgctgcg aaagcgtcac gggaagaaga ccaccgcgga tcactgaaag aggaacagac
     1501 cggaccaccc acccaagacc aacccaaccc accgcccatg ctacgcttga gccaaagact
     1561 aaatagattt taggactaag ttagtgagca cagctgcact gccgactgga gtattcaggc
     1621 agccccatta gttcaattaa gtggtggata ttttgattag atatgatatg tcgatagaat
     1681 cgaacacttt ataaagcagt ttcttgagca gctaaatttg agatgatatt ctaggtcatc
     1741 ctaggccttt tccttccaca ggaaccattt aatatattta aattaagaat aactattcca
     1801 taggagtact actttttcta gtacgcttta tttgatttta atttaaagag cacaaatatt
     1861 aaaactctgt taacattttc catcttttaa gcatcagcct ca