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LOCUS XM_017151138 2483 bp mRNA linear INV 09-DEC-2024 (Vps26), mRNA. ACCESSION XM_017151138 VERSION XM_017151138.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151138.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2483 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2483 /gene="Vps26" /note="vacuolar protein sorting 26; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108063868" CDS 272..1720 /gene="Vps26" /codon_start=1 /product="vacuolar protein sorting-associated protein 26" /protein_id="XP_017006627.3" /db_xref="GeneID:108063868" /translation="MNFLGFGQSADIEIVFDGAEHKTAEVKGEDGKVEKMLLFYDGET VSGKVNVTLKKPGSKLEHQGIKIEFIGQIELFYDRGNHHEFKCLAKALARPGDLIQNN SYPFDFPNVEKQFEVYAGSNVRLRYFLRATIVRRISDITKEVDIAVHTLCSYPEMNNP IKMEVGIEDCLHIEFEYNKSKYHLRDTIIGKIYFLLVRIKIKHMEIAIIKRESTGTGP TMFNENETIAKYEIMDGAPVKGESIPIRVFLAGYNLTPTMRDINKKFSVKYFLNLVLM DTEDRRYFKQQEITLWRKADIPRYHGAQQQQQQHQHQQHQHVPLHAPPHLVSGPAAPT VAHSLISSSTDSGDVGGAPGTAGSESKMGLFTRESPNQEFSQQQLDSPPLTPTPATVP ASAAVPAPTSASSAPEPAPERAPERGMGDGAAAATTSASPVAMLSSSPPPLLPASPLS RSDGDSSEQQVLQPEEEAGEAKKSSVSPLAAD" misc_feature 287..1111 /gene="Vps26" /note="Vacuolar protein sorting-associated protein 26; Region: Vps26; pfam03643" /db_xref="CDD:397622" misc_feature <1232..>1498 /gene="Vps26" /note="Herpes virus major outer envelope glycoprotein (BLLF1); Region: Herpes_BLLF1; pfam05109" /db_xref="CDD:282904" polyA_site 2483 /gene="Vps26" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgaaaattg caattttttc atttcacaca cacacactcg cgacacacac gccagcagcg 61 caacgaagga cccaaaaagg ccgcagaaaa acgcccagca aagccgaggg ttacggaaaa 121 ggatctaagg tgaccaccag gaccgcccac caggagccac cactgcggga aaagccaaac 181 attccagttc cagcggtgca ggaagaagaa gcagaagcag cagaggagag gaagaagccg 241 attcgtttcg attcgacgac gtttatcaat tatgaatttc ctgggtttcg gccagtcagc 301 ggacattgag atagtcttcg atggggctga gcacaagacg gcggaggtca agggggagga 361 cggcaaggtg gagaagatgc tgctcttcta cgacggcgag acggtgtccg gcaaggtgaa 421 cgtgaccctc aagaagccgg gcagcaagct ggagcaccag ggcatcaaga tcgagttcat 481 cggccagatc gagctcttct acgaccgggg caaccaccac gagttcaagt gcctggccaa 541 ggcgctggcc cggcccggcg acctcatcca gaacaacagc taccccttcg acttccccaa 601 cgtggagaag cagttcgagg tgtacgccgg ctcgaacgtg cggctgcgct acttcctgcg 661 cgccaccatc gtgcggcgca tcagcgacat caccaaggag gtggacatcg ccgtgcacac 721 gctgtgcagc tacccggaga tgaacaaccc catcaagatg gaggtgggca tcgaggactg 781 cctgcacatc gagttcgagt acaacaagag caagtaccac ctgcgggaca cgatcatcgg 841 caagatctac ttcctgctgg tgcgcatcaa gatcaagcac atggagatcg cgatcatcaa 901 gcgcgagagc acgggcacgg ggcccacgat gttcaacgag aacgagacga tcgccaagta 961 cgagatcatg gacggggcgc ccgtcaaggg cgagagcata cccatccggg tcttcctggc 1021 cggctacaac ctcacgccca ccatgcggga catcaacaag aagttctcgg tcaagtactt 1081 cctcaacctg gtgctgatgg acaccgagga ccggcgctac ttcaagcagc aggagatcac 1141 gctgtggcgc aaggcggaca ttccgcgcta ccacggcgcc cagcagcagc agcagcaaca 1201 ccagcaccaa cagcaccagc acgtcccgct gcacgcgccg ccgcacctgg tcagcggccc 1261 ggcggcgccc acggtggccc actcgctgat cagctccagc acggacagcg gcgacgtggg 1321 cggagctccg ggcaccgccg gctccgagtc caagatgggc ctgttcaccc gggagagccc 1381 caaccaggag ttcagccagc agcagctgga ctcgccaccg ctgacgccca cgcccgcgac 1441 ggttcccgct tcagcggcag ttcctgcacc cacatcggcc tcatccgctc cagagccggc 1501 tcccgagcgg gctcccgagc ggggcatggg cgatggagcc gcggcggcca ccacaagtgc 1561 ctcgcccgtc gccatgctct ccagctcgcc gccgccgctg ctgcccgcgt cgccgctgtc 1621 ccgttccgac ggcgactcgt cggagcagca ggtgctccag ccggaggagg aggctgggga 1681 ggcgaaaaag agcagcgtgt cgccgctggc cgccgattga gtgggcggct gggcaggatc 1741 aggatcagca gcagcagcaa gcggaactat tacgcatata atcgtataca gcagcaggag 1801 ggcggaggag cggagcagca gcagcagcaa caaatatgca tatatctatt tttttaacgt 1861 taatttaaaa ttgttacaaa tgttttattg aggttatgcg cgtcatttac caaaagcaag 1921 caaaacgcat atgatagtaa cgagaaaaca aaacgaaact taggacaaat gaggagaggc 1981 gacctcgtag ctatagccaa tctctgggca aggagatggt gacgcaaatc ccaatcccaa 2041 tcctaaccct catcccccaa aaaactagtt aaacccccta gtattccgat gaccattccc 2101 tgtatccctg gggcgtttgg aaaatatgat ttttcaattt gaaaaatgtt gaaattgctt 2161 tctaaaagtg agaatagagt ccctgaaatc gaaatcaaag tgtgcattaa actaaaccaa 2221 ctccaataca gataacagat gaagcaacaa gacaaaacac ccattaagta ataaagtttt 2281 agtctatagc gaactagcga gtcggtgaag ctgggaagga tctctgacct ggtctctaga 2341 ggatcggaag tggaagtgga agtggaagcg acgaaacatg ttacatgcct tgcatatgta 2401 cataacagtt catatacata atatacacga aatattaata tatatacata cacttagaaa 2461 cgcaattaaa cgaataaaag cga