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LOCUS XM_017151136 3617 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017151136 VERSION XM_017151136.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151136.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3617 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3617 /gene="LOC108063867" /note="protein MMS22-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063867" CDS 140..3445 /gene="LOC108063867" /codon_start=1 /product="protein MMS22-like" /protein_id="XP_017006625.3" /db_xref="GeneID:108063867" /translation="MDYDLFQSDDDEEILTAFTQATEQLQQAGHDGQMQTDDADEEEE VDFLPEFSCTGRNPLKSQFPGEGFLRSGFAQLDPPRCRLENLCFDFAQGQLLVAAVRS YLHAEACKNVQKLFAAVAGQQQLQAAPSAALNSGWFRVRQQVSHFYHLLLRLRENDLL AGAPQFLEDLRQLLNNQLDAEAWKVLYFAEHSKGNECQAPAYHLYHGVLEWRFLDLHL LYGSGEDQGFLGQLERTLDDLVVCAGLHYRGRHRPELIHASPFMCRCTKELWLLLKLL VPKWMGDRDLDFWTLFHKAMQRHRTSYFQGESSAVSLAHHEFYAWLRLGVARLEENQP DEALSPPPGSFQSAALLKQFLASQPDEQQRRVYLTLLAPLQLQLGQPDTDVLCQLWEY LHRSLNCNFSAGAELDQLPLTCPTGAAYVERYGRLLAKCQLEDLNLSSFTMYAWLLGR TLKLLPSQGRSNQRQKLLGRIFSKFSAAKLLALNEPGIHHVIELFLCLLLSHEDLGEL APKLREMLLCLALDKLPPARRILVAKGHMALLLLHAQHRLSMEDYVGKLLGQLAAIRN DAEVGAIYVSSLQAVFELADDFKRGEQQLLGPWLAHFVEKSGQASQDRVWQAIHHLIL RLGEPRAAAGNASGIREALQQHILPLLRTQYVSGHSAWLPKLAASFVALDKEGDKLLL GFLQGPEPLNMAASAQLMLQVLEDDGRPANSTILQVWVKSLVLLNAQHESVVALTRHV TRLEEFRQLAIDPASLEGGREPLCGFFGALGRRAQQEEAAAHVRMQLSHKLHAYVSHF ELWLPPERLRSELGARFYSFLAIVIYNCPTLAYVRSKPTCFFHLAMVRFLLTTQLQAG VPPEGRLPQMVHKIFPVLLQGIGRLPYRTDTYVARTLEQLVQHWTPHFGFSPSAKLVA RPFATLLQADGDGELAQCVLRLLVTQHLVVQRRKAGQQAGLVITIVQQLIEGTAREQQ QQLLTLLRGVHIPLLEHVMFVDELDLSRGQVFGLYGVLVAHEAYRHSQAVRDLCSQHL RALAEKHLAHCTYFYFQMLIKLAELAPDLVSPLLPFVRQQAQQVELKRGAGEDVGIRK CLQRLQKVLGLDS" misc_feature <1220..1930 /gene="LOC108063867" /note="S-phase genomic integrity recombination mediator, N-terminal; Region: MMS22L_N; pfam14910" /db_xref="CDD:464366" misc_feature 2330..3430 /gene="LOC108063867" /note="S-phase genomic integrity recombination mediator, C-terminal; Region: MMS22L_C; pfam14911" /db_xref="CDD:464367" polyA_site 3617 /gene="LOC108063867" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagtggtgg acaatcggat agtcttgacg gtgcgatagt ttgccgatag tgccagtgtt 61 ggcaggcgcc tcgcttccga tatcgattgg catttcaata gccgcgcaaa atccgatcct 121 cccgagaaat cgcaatccca tggactacga cctgttccag tcggacgacg acgaggagat 181 cctgaccgcc ttcacccagg ccaccgagca gctgcagcag gcgggccacg atgggcaaat 241 gcagacggac gacgcggatg aggaggagga agtggacttc ctgccggaat tcagctgcac 301 cggccggaac ccactgaaga gtcagtttcc gggcgagggc ttcctgcgga gtggcttcgc 361 ccagctggat ccgccccgct gtcggctgga gaacctctgc ttcgactttg cccagggaca 421 gttgctggtg gccgcggtgc gaagctacct ccatgcggag gcctgcaaga acgtgcagaa 481 gctctttgcg gccgtggccg gtcagcagca gttgcaggcc gccccatccg ccgccctgaa 541 ctccggatgg tttcgggtgc gccagcaggt cagccacttc taccacctgc tcctccgcct 601 gcgggagaac gacctgctgg cgggggcccc gcagttcctg gaggatctgc gccagctgct 661 caacaaccag ctggacgcgg aggcctggaa ggtgctgtac ttcgcggagc acagcaaggg 721 aaacgagtgc caggcgccgg cctaccacct gtaccacggc gtcctggagt ggcgcttcct 781 ggacctgcac ctgctgtacg gctctggcga ggatcagggc ttcctggggc agctggagcg 841 cacgctggac gacctggtcg tgtgtgccgg cctccactac cggggcagac atcggccgga 901 gctcatccac gcctcgccgt tcatgtgtcg ctgcaccaag gagctgtggc tgctgctgaa 961 gctcttagtc cccaaatgga tgggcgacag ggacctggac ttctggacgc tcttccacaa 1021 ggccatgcag aggcacagga ccagctactt tcagggtgaa agcagtgcgg tttccttggc 1081 gcaccacgag ttctacgcct ggctgaggct cggagtggcc cgcctggagg agaaccagcc 1141 ggatgaggcg ctctccccac caccgggcag cttccagtcc gccgctctgc tcaagcagtt 1201 cctggccagc cagccggacg agcagcagcg acgcgtgtac ctcacgctgc tcgctccgct 1261 gcagctgcag ctgggtcagc cggacacgga cgtgctgtgc cagctgtggg agtacctgca 1321 ccgctccctc aactgcaact tcagcgcggg cgccgagctg gaccagctgc cgctcacctg 1381 ccccacgggg gctgcctacg tcgagcgcta cggcaggctg ctggccaagt gccagctgga 1441 ggacctgaat ctcagcagct tcaccatgta cgcctggctg ctgggcagga ccctgaagct 1501 cctgccctcg cagggccgca gcaaccagcg ccagaagctg ctcggccgca tcttcagcaa 1561 gttcagtgcc gccaagctct tggcgctcaa cgagccgggc atccaccatg tgatcgagct 1621 cttcctgtgc ctcctgctct cccacgagga tctcggcgag ctggcgccca agctgcgtga 1681 gatgctgctc tgcctggccc tggataagct gcctcctgcg cggaggattc tggtggccaa 1741 gggccacatg gccctgctcc tcctgcacgc ccagcatcgc ctgtccatgg aggactatgt 1801 gggcaagctg ctcggccagt tggccgccat tcggaacgat gcggaggtgg gcgccatcta 1861 cgtgagcagc ctgcaggccg tcttcgagct ggcggatgac ttcaagcgcg gcgagcagca 1921 gctcctgggc ccctggctgg cgcacttcgt ggagaagagt ggccaggcct cgcaggaccg 1981 cgtgtggcag gccattcacc atctaatcct gcgcctcggc gagccgagag cagccgcagg 2041 caatgccagt ggcatcaggg aggcgctcca gcagcacatt ctgcccctgc tgaggacgca 2101 gtacgtcagt ggccacagcg catggctccc caagctggcc gccagctttg tggcgctgga 2161 caaggagggc gacaagctgc tgctgggctt cctgcaggga ccagagcccc tcaacatggc 2221 cgcttcggcc cagctgatgc tccaggtgct ggaagacgac ggccggcctg cgaactccac 2281 gatcctgcag gtgtgggtca agtccctggt tctcctcaac gcgcagcacg agtctgtggt 2341 ggccctaacc cgccatgtca cccggctgga ggagttccgg cagctggcca tcgatcccgc 2401 ctccttggaa ggcggtcgcg agccgctctg cggcttcttc ggcgccctgg gaaggcgggc 2461 ccagcaggag gaggctgcgg cccacgtgcg gatgcagctg agccacaagc tgcacgccta 2521 cgtgagtcac ttcgagctgt ggctgccgcc ggagcggctg cgctcggagc tgggcgcccg 2581 cttctacagc ttcctggcca tcgtcatcta caactgcccc acgctggcgt acgtgcgctc 2641 caagcccacc tgcttcttcc acctggccat ggtgcggttc ctgctcacca cccagctgca 2701 ggcgggcgtt ccgcccgagg gccgcctgcc gcagatggtg cacaagatat tccccgtgct 2761 gctgcagggc atcggccggc tgccctaccg cacggacacc tacgtggcca ggaccctgga 2821 gcagctggtc cagcactgga cgccgcactt tggcttctcg cccagcgcca agctggtggc 2881 ccgtccgttt gccacgctcc tccaggcgga cggggacggc gagctggcgc agtgcgtgct 2941 ccggctgctg gtcactcagc atctggtcgt gcagcgacgc aaggcgggcc agcaggcggg 3001 cctggtcatc accatcgtgc agcagctcat cgagggcacg gccagggagc agcagcagca 3061 gctgctgacc ctcctgcgcg gcgtgcacat tccgctgctg gaacatgtga tgttcgtgga 3121 cgaactggac ttgagtcgcg gccaggtgtt tgggctctat ggagtgctcg tcgcccacga 3181 ggcgtacagg cactcgcagg ccgtgcggga cctgtgctcc cagcacctgc gagcgctggc 3241 cgagaagcac ctggcccact gcacctactt ctacttccag atgctcatca aactggcgga 3301 gctggcgccg gatcttgttt ctccactcct gcccttcgtg aggcagcagg cgcagcaggt 3361 ggagctgaag cgcggcgcag gcgaggatgt gggcatacgc aagtgcctgc agcgactcca 3421 gaaggtctta ggtctagata gttaataaaa aatatgctta cattgttttg atcgagatat 3481 ctttctattc atattgagta attgagttgt aaatccttgt gtaaatcaag aaacccttct 3541 ttaatgtttg gcattctata aaaaatgtta ttacttcagt cggaaggcga tcctcctccc 3601 ctggagattg actctaa