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LOCUS XM_017151135 1905 bp mRNA linear INV 09-DEC-2024 membrane protein 1 (TRAM), transcript variant X2, mRNA. ACCESSION XM_017151135 VERSION XM_017151135.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151135.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1905 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1905 /gene="TRAM" /note="translocating chain-associated membrane protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108063866" CDS 229..1341 /gene="TRAM" /codon_start=1 /product="translocating chain-associated membrane protein 1" /protein_id="XP_017006624.2" /db_xref="GeneID:108063866" /translation="MAIKPGLGRKTSNKNPPILSHEFVIQNHADIISCVAMVFVVGLM NESTAAFASAFISLHHNVSGEDPSREQPYGKAYTYIAGIKDYCAIFFYTLTCIIMHAI IQEFVLDKISKKLHLSKFKLARFNESGQLVAFYLLSFVWGAHVLLKEGYLGQVAQLWE GFPEHPMSFLHKFYFIVQLAYYLHMLPELYFQKIKTKEEQQPKIVHSISGFTLIVLAY TLSFQRLALVLLTLHYFSELLSHVFQLIGVFDREERLAKLRVVNNAVFFLARFATSVI GVLTLYYGIGGLRSLLALGGLIALQGYLVFSFITEQLRAKREAKKEAKREAKLALQTK KPKDKAASKEKVKRKKESDLPEADQTQSSPVKQKLK" misc_feature 382..591 /gene="TRAM" /note="TRAM1-like protein; Region: TRAM1; pfam08390" /db_xref="CDD:462460" misc_feature 598..1098 /gene="TRAM" /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC; smart00724" /db_xref="CDD:214789" misc_feature <1159..1284 /gene="TRAM" /note="Stathmin family; Region: Stathmin; pfam00836" /db_xref="CDD:459956" polyA_site 1905 /gene="TRAM" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcttcgccga ttcggtttcg gattcagatt cacaatcaga tttcgatttg gagtcagttc 61 ccgattccga ttcccccgat tcagttgcag atcacgtcgc cgagtttgcc agctgggaac 121 gcacagcaca cgcaccgcct acgtcagcaa aatcacgttg caaatatcgg ccaaaagagc 181 gtttttggcc aaaaatccta tttcctttta gaaccccctt tcgataaaat ggccatcaaa 241 ccgggactcg gtcgcaagac gagcaacaag aacccaccga tcctgagcca cgagttcgtg 301 atccagaacc atgcggacat catctcgtgc gtggccatgg tcttcgtcgt tggcctgatg 361 aacgaatcga cggctgcctt tgccagcgcc ttcatatccc tgcatcataa tgtcagcggc 421 gaggatccca gccgggagca gccctacggc aaggcctaca cctacatcgc tggcatcaag 481 gactactgtg cgatattctt ctacacgctg acctgcatca tcatgcacgc gatcatccag 541 gagtttgtgc tggacaagat cagcaaaaag ctgcatctat ccaagttcaa gctggcccgg 601 tttaatgaat ccggccagct ggtggccttc tatctgctgt ccttcgtctg gggcgcccat 661 gtgctgctga aggagggcta cctcggccag gtggcccagc tgtgggaggg cttccccgag 721 catccgatga gcttcctgca caagttctac ttcatcgtcc agctggccta ctacctgcac 781 atgctgcccg agctgtactt ccagaagatc aagaccaagg aggagcagca gcccaagatt 841 gtgcattcga tcagcggttt caccttgatt gtgctcgcct acacgctgag tttccagcgc 901 ttggctttgg tccttctaac gctgcactac ttcagcgagc tgctgtcgca tgtcttccag 961 ctcatcggcg tctttgatcg cgaggagcgt ctggccaagc tgagggtggt caacaacgca 1021 gtcttcttcc ttgcccgctt tgccacgtcg gtgattggcg tgctgacgct gtattatggc 1081 attggagggc tgcgatccct gctcgctttg ggcggcctga ttgccctgca gggctacctg 1141 gtcttctcct tcatcaccga gcagctgcgc gccaagcggg aggccaagaa ggaggccaag 1201 cgggaggcca agctggcgct gcagacgaag aagcccaagg acaaggcggc cagcaaggag 1261 aaggtgaagc gcaagaagga gagcgacctg cccgaggcgg accaaaccca gtccagtccc 1321 gtcaagcaga agctcaagtg aggggcagca aatgccgggc agagcaacaa aatcttccgc 1381 acacttccaa tccaaaatga gagatgtttg agagcagcac catgaacaga aggaatccct 1441 gtcttctttg taaatctccg tttagctcaa gaaccacact actgcaaaca tttcagctgc 1501 atttatactt cctcctcctc gacacacaca caacacacca caaacaaact atatttctct 1561 agcctaaatg ttttgtttca ttttaagttt acatcctttt ttaaacaaat tttttttatt 1621 tttatacata ccttaaaaaa tgaaaaaaaa gagaaaacaa aaaatataac aacaaaaaaa 1681 acaacaaaca aacaacaaga aaagcttaat gtaacgtgtg tttttgaatt gttcttcctt 1741 gaatgtaagc aaattgattt aacaacaatt tccgatcgtc ctacttgcgt gtaaaactat 1801 ttttttagag aagatcaaca agaagttgaa gattgtaacg acgaggcaaa caaaacattt 1861 gctaaatata taaaaaatat atattttgta taagaaaaaa aaaga