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LOCUS XM_017151134 1891 bp mRNA linear INV 09-DEC-2024 membrane protein 1 (TRAM), transcript variant X1, mRNA. ACCESSION XM_017151134 VERSION XM_017151134.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151134.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1891 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1891 /gene="TRAM" /note="translocating chain-associated membrane protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108063866" CDS 215..1327 /gene="TRAM" /codon_start=1 /product="translocating chain-associated membrane protein 1" /protein_id="XP_017006623.2" /db_xref="GeneID:108063866" /translation="MAIKPGLGRKTSNKNPPILSHEFVIQNHADIISCVAMVFVVGLM NESTAAFASAFISLHHNVSGEDPSREQPYGKAYTYIAGIKDYCAIFFYTLTCIIMHAI IQEFVLDKISKKLHLSKFKLARFNESGQLVAFYLLSFVWGAHVLLKEGYLGQVAQLWE GFPEHPMSFLHKFYFIVQLAYYLHMLPELYFQKIKTKEEQQPKIVHSISGFTLIVLAY TLSFQRLALVLLTLHYFSELLSHVFQLIGVFDREERLAKLRVVNNAVFFLARFATSVI GVLTLYYGIGGLRSLLALGGLIALQGYLVFSFITEQLRAKREAKKEAKREAKLALQTK KPKDKAASKEKVKRKKESDLPEADQTQSSPVKQKLK" misc_feature 368..577 /gene="TRAM" /note="TRAM1-like protein; Region: TRAM1; pfam08390" /db_xref="CDD:462460" misc_feature 584..1084 /gene="TRAM" /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC; smart00724" /db_xref="CDD:214789" misc_feature <1145..1270 /gene="TRAM" /note="Stathmin family; Region: Stathmin; pfam00836" /db_xref="CDD:459956" polyA_site 1891 /gene="TRAM" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttcgccgatt cggtttcgga ttcagattca caatcagatt tcgatttgga gtcagttccc 61 gattccgatt cccccgattc agttgcagat cacgtcgccg agtttgccag ctgggaacgc 121 acagcacacg caccgcctac gtcagcaaaa tcacgttgca aatatcggcc aaaagagcgt 181 ttttggccaa aaatcctaac cccctttcga taaaatggcc atcaaaccgg gactcggtcg 241 caagacgagc aacaagaacc caccgatcct gagccacgag ttcgtgatcc agaaccatgc 301 ggacatcatc tcgtgcgtgg ccatggtctt cgtcgttggc ctgatgaacg aatcgacggc 361 tgcctttgcc agcgccttca tatccctgca tcataatgtc agcggcgagg atcccagccg 421 ggagcagccc tacggcaagg cctacaccta catcgctggc atcaaggact actgtgcgat 481 attcttctac acgctgacct gcatcatcat gcacgcgatc atccaggagt ttgtgctgga 541 caagatcagc aaaaagctgc atctatccaa gttcaagctg gcccggttta atgaatccgg 601 ccagctggtg gccttctatc tgctgtcctt cgtctggggc gcccatgtgc tgctgaagga 661 gggctacctc ggccaggtgg cccagctgtg ggagggcttc cccgagcatc cgatgagctt 721 cctgcacaag ttctacttca tcgtccagct ggcctactac ctgcacatgc tgcccgagct 781 gtacttccag aagatcaaga ccaaggagga gcagcagccc aagattgtgc attcgatcag 841 cggtttcacc ttgattgtgc tcgcctacac gctgagtttc cagcgcttgg ctttggtcct 901 tctaacgctg cactacttca gcgagctgct gtcgcatgtc ttccagctca tcggcgtctt 961 tgatcgcgag gagcgtctgg ccaagctgag ggtggtcaac aacgcagtct tcttccttgc 1021 ccgctttgcc acgtcggtga ttggcgtgct gacgctgtat tatggcattg gagggctgcg 1081 atccctgctc gctttgggcg gcctgattgc cctgcagggc tacctggtct tctccttcat 1141 caccgagcag ctgcgcgcca agcgggaggc caagaaggag gccaagcggg aggccaagct 1201 ggcgctgcag acgaagaagc ccaaggacaa ggcggccagc aaggagaagg tgaagcgcaa 1261 gaaggagagc gacctgcccg aggcggacca aacccagtcc agtcccgtca agcagaagct 1321 caagtgaggg gcagcaaatg ccgggcagag caacaaaatc ttccgcacac ttccaatcca 1381 aaatgagaga tgtttgagag cagcaccatg aacagaagga atccctgtct tctttgtaaa 1441 tctccgttta gctcaagaac cacactactg caaacatttc agctgcattt atacttcctc 1501 ctcctcgaca cacacacaac acaccacaaa caaactatat ttctctagcc taaatgtttt 1561 gtttcatttt aagtttacat ccttttttaa acaaattttt tttattttta tacatacctt 1621 aaaaaatgaa aaaaaagaga aaacaaaaaa tataacaaca aaaaaaacaa caaacaaaca 1681 acaagaaaag cttaatgtaa cgtgtgtttt tgaattgttc ttccttgaat gtaagcaaat 1741 tgatttaaca acaatttccg atcgtcctac ttgcgtgtaa aactattttt ttagagaaga 1801 tcaacaagaa gttgaagatt gtaacgacga ggcaaacaaa acatttgcta aatatataaa 1861 aaatatatat tttgtataag aaaaaaaaag a