PREDICTED: Drosophila takahashii mitochondrial ribosomal protein

LOCUS       XM_017151130             883 bp    mRNA    linear   INV 09-DEC-2024
            L16 (mRpL16), mRNA.
ACCESSION   XM_017151130
VERSION     XM_017151130.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017151130.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..883
                     /gene="mRpL16"
                     /note="mitochondrial ribosomal protein L16; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:108063863"
     CDS             111..842
                     /gene="mRpL16"
                     /codon_start=1
                     /product="large ribosomal subunit protein uL16m"
                     /protein_id="XP_017006619.1"
                     /db_xref="GeneID:108063863"
                     /translation="MLSLKTVAQLFKQTLAGGNIATVNTAGLKYFAPPIKYQNVEQPE
                     RPKLRIMERQPQLPPNIRPPKMQKRLRYMRGPETVHNTLLHKQYAIVATGGGRLRWGH
                     YEMMRLTIGRKMNVATMFATWRVPAPWQPITKKGQGQRMGGGKGAIDHYVTPIKAGRV
                     IVEIAGRCEFVEVRQFLQQVANQLPFQAAVVSQEMLDEQRAAEEEHARQNENPFTMKY
                     VIQNNLSGCHRWLSPVDHKWFGKHL"
     misc_feature    291..683
                     /gene="mRpL16"
                     /note="Ribosomal protein L16p/L10e; Region: Ribosomal_L16;
                     pfam00252"
                     /db_xref="CDD:459733"
     polyA_site      883
                     /gene="mRpL16"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tggcagcgcc gcatcgataa aaaatcgcta tcgatgtttt cataacacat ttttaggaaa
       61 aagaattatt aaaataggga attaatagta atttaagaca caaacccgcc atgctgagcc
      121 tgaaaacagt cgcgcagctc ttcaagcaaa ccctggcagg gggcaacata gcaactgtca
      181 acacagccgg cctcaagtac ttcgccccgc ccatcaaata ccagaatgtg gagcagccgg
      241 agcggcccaa gctgcggatc atggagcgcc agccgcagct gccgccgaac atccggccgc
      301 ccaagatgca gaagcgcctg cgctacatgc gcggccccga gacggtgcac aacacgctgc
      361 tgcacaagca gtacgccatc gtggccaccg gcggcggccg cctgcgctgg ggccactacg
      421 agatgatgcg cctgaccatc ggccgcaaga tgaacgtggc caccatgttc gcgacgtggc
      481 gcgtccccgc gccctggcag ccgatcacca agaagggcca gggccagcgc atgggcggcg
      541 gcaagggggc catcgaccac tacgtgaccc ccatcaaggc cggccgcgtc atcgtcgaga
      601 tcgccggccg gtgcgagttc gtcgaggtga ggcagttcct gcagcaggtg gccaaccagc
      661 tgcccttcca ggcggccgtc gtctcgcagg agatgctcga cgagcagcgg gcggccgagg
      721 aggagcacgc ccgccagaac gagaacccct tcaccatgaa gtacgtcatc cagaacaacc
      781 tgagcggctg ccaccggtgg ctctcgcccg tggaccacaa gtggttcggc aagcacctgt
      841 aggtgcttta tctcgccaat aaagaatcct tgttaacctg tta