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LOCUS XM_017151103 6891 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_017151103 VERSION XM_017151103.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151103.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6891 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6891 /gene="Nmdar2" /note="NMDA receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108063847" CDS 543..3749 /gene="Nmdar2" /codon_start=1 /product="glutamate receptor ionotropic, NMDA 2B isoform X2" /protein_id="XP_017006592.2" /db_xref="GeneID:108063847" /translation="MMPSRVKLKSGGRDREEEELQPKSQSNTASYSQHNSNSHSPISI SNPPPLLILLLLLAVLLPSCHALRLTNGGGSLSKGAAANKEQLNIGLIAPHTNFGKRE YLRSINNAVTGLTKTRGAKLTFLKDYSFEQKNIHFDMMSLTPSPTAILSTLCKEFLRV NVSAILYMMNNEQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSTLQLQL APSIEHQSAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERVAEMQEHFKFTILNS IVVTRTSDLMELVNSEARVMLLYATQTEAITILRAAEEMKLTGENYVWVVSQSVIEKK DAHSQFPVGMLGVHFDTSSAALMNEISNAIKIYSYGVEAYLTDPANRDRRLTTQSLSC EDEGRGRWDNGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRSAELKIMNLRPSANNKN LVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPAD PVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGF TYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFMET GIAIVVAKRTGIISPTAFLEPFDTASWMLVGIVAIQAATFMIFLFEWLSPSGYDMKLY LQNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYT ANLAAFMITREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTIHKYFNVMHNY MRQYNKTSVADGVAAVLNGNLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLA FSRNSKYVQMFNKRLLEFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAF LLLMAGILLAALLLLLEHVYFKYIRKRLAKKDGGHCCALISLSMGKSLTFRGAVFEAT EILKKHRCNDPICDTHLWKVKHELDMSRLRVRQLEKVMDKHGIKAPQLRLASSSDLLN HHHLKERPPLLGNLSLAASAQDLYRSYKTEIAEMETVL" misc_feature 795..1955 /gene="Nmdar2" /note="Type 1 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_type1; cl10011" /db_xref="CDD:471960" misc_feature 2004..3224 /gene="Nmdar2" /note="The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_iGluR_NMDA_Nr2; cd13718" /db_xref="CDD:270436" misc_feature order(2352..2363,2367..2369,2373..2381,2820..2822, 2886..2891,2901..2903,3015..3017,3084..3092,3099..3101, 3117..3119,3165..3176,3183..3185) /gene="Nmdar2" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270436" misc_feature order(2352..2360,2373..2375,2886..2894,3012..3017) /gene="Nmdar2" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270436" polyA_site 6891 /gene="Nmdar2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtcgcaatc agtccgcaga gcgcgctccg ttccgttctg tcctgttctg ttctgttccg 61 ctcgctccgt gtcgttcggt tcgcatccgc atccgcagga gctgcccagc cgacgtccag 121 agtttcggtt tcggtttcag tttcagcttg cgtctccgtt ttccacattt aactgagaac 181 tgagctgatc tgtgctgagc ctggcttggc cacaagcggc taaaacgaac ttgggaactg 241 ggaacttgag actggactag acctagacta gaacttgacc cggactagac ctagactgga 301 ctagactaga cccaaaagtg agcctaggat gcgaacgtaa accaatgcac agcagccaat 361 acaatcacaa caactccccg gggaagcgaa cagagggcca ggcaatccat ccacacaccg 421 atcaatatcc cctcgaatat cgaatatatc aaatagcagc ccatcccggc cagatgcact 481 agagaccagc cggagcacgg agcaccgagc accggatccc agcgaactca agtccacaag 541 ccatgatgcc cagtcgcgtc aagctgaaat cggggggcag ggatcgggag gaggaggagt 601 tacagccgaa gtcacagtcc aacactgcca gttacagcca gcacaatagc aatagccatt 661 ccccgatctc gatctcgaac cctccgccac tgctgatcct cctcctcctg ctcgctgtgc 721 tcctgccctc ctgccacgcc ctccggctga ccaacggggg cggcagcctg agcaagggcg 781 cggcggccaa caaggagcag ctcaacatcg gcctgatcgc cccgcacacg aacttcggga 841 agcgggagta cctgcggagc atcaacaacg cggtcaccgg actcacgaag acgcgcggcg 901 ccaagttgac cttcctcaag gactactcct tcgagcagaa gaacatccac ttcgacatga 961 tgtcgctgac gcccagtccc acagccatcc tgagcacctt gtgcaaggaa ttcctgcgcg 1021 tgaacgtctc ggccatcctg tacatgatga acaacgaaca gttcggccac agcacggcct 1081 cggcgcagta cttcctgcag ctggccggct acctgggcat cccggtgatc tcgtggaacg 1141 ccgacaactc gggcctggag cgccgggcct cccagtcgac gctgcagctg cagctggcgc 1201 cgagcatcga gcaccagagc gccgccatgc tgagcatttt ggagcgctac aagtggcacc 1261 agttctcggt ggtcacctcg cagatagccg gccacgatga cttcgtgcag gcggtgaggg 1321 agcgcgtggc cgagatgcag gagcacttca agttcaccat cctcaactcg atagtggtta 1381 cgcgcaccag cgacctgatg gagctggtca acagcgaggc acgcgtgatg ctgctctatg 1441 ccacgcaaac ggaggccatc accattctgc gggccgccga ggagatgaag ctcaccgggg 1501 agaactatgt gtgggtggtc agccagtcgg tgatcgagaa gaaggacgcc cactcgcagt 1561 tccccgtcgg catgctgggc gtccacttcg acacctccag tgcggcgctg atgaacgaga 1621 tctccaatgc catcaagatc tacagctacg gcgtggaggc ctacctcacg gacccggcca 1681 atcgggaccg ccgcctcacc acccagtcgc tctcctgcga ggacgagggt cgtggtcgct 1741 gggacaacgg agaaatcttc ttcaagtact tgcgcaacgt gtccatcgag ggggacctca 1801 ataagccgaa catcgagttc acggctgacg gggacctgcg ctcggcggag ctcaagatca 1861 tgaatctccg gcccagcgcc aacaacaaga acctggtgtg ggaggagatt ggagtgtgga 1921 agtcgtggga gacgcagaag ctggacatcc gcgacattgc gtggcccggc aactcgcacg 1981 ccccgcccca gggcgtgccg gagaagttcc atttgaagat cacattcctc gaagaggcac 2041 cctatatcaa tctgtcgccc gcggaccccg tgagtggcaa gtgcctgatg gaccgcggtg 2101 tgctctgccg ggtggcggcc gaccacgaaa tggccgccga catcgacgtg ggccaggcac 2161 accgcaacga gtccttctac caatgctgca gcggcttctg catcgatctg ctcgagaagt 2221 tcgccgagga gctgggcttc acctacgagc tggtgcgggt cgaagatggt aaatggggta 2281 ccctcgagaa tggcaagtgg aacggcctga tcgccgacct ggtcaaccgc aagacggaca 2341 tggtcctcac ctcgctgatg atcaacacgg agcgggaggc ggtcgtcgac ttctccgagc 2401 ccttcatgga gacgggcatc gccatcgtgg tggccaagcg cacgggcatc atctcgccca 2461 cggccttcct cgagcccttc gacacggcct cctggatgct ggtgggcatc gtggccatcc 2521 aggcggccac cttcatgatc ttcctcttcg agtggctctc gcccagcggc tacgacatga 2581 agctctacct gcagaacacc aacgtgaccc cgtaccgctt ctccctcttc cgcacctact 2641 ggctggtctg ggccgtcctc ttccaggccg ccgtccacgt ggactcgccg cgcggcttca 2701 cctcgcgctt catgaccaac gtgtgggcct tgttcgccgt ggtcttcctg gccatctaca 2761 ctgccaacct ggccgccttc atgataacca gggaggagtt ccacgagttc agcggtctca 2821 acgacagccg tctggtgcat cccttctccc acaagccctc cttcaagttc ggcaccatcc 2881 cgtacagcca cacggactcg accatccaca agtacttcaa cgtcatgcac aactacatga 2941 ggcagtacaa caagaccagc gtggccgacg gagtggccgc cgtgctcaac ggcaacctgg 3001 actccttcat ctacgacggc actgtgctgg actatctggt ggcccaagac gaggactgcc 3061 ggctcatgac cgtgggcagc tggtatgcga tgacgggcta cgggctggct ttcagccgca 3121 actccaagta cgtgcagatg ttcaacaagc gactgctcga gttccgggcc aacggggacc 3181 tggagcggct gcggcgctac tggatgacgg gcacgtgccg accggggaag caggagcaca 3241 agtcctccga tccgctggcc ctcgagcagt tcctgtccgc cttcctgctc ctgatggccg 3301 gcatcctgct ggcggccctg ctgctgctgc tcgagcacgt ctacttcaag tacatccgca 3361 agcggctggc caagaaggac ggcggccact gctgtgcgct catctcgctc tccatgggca 3421 agtcgctgac cttccggggc gccgtcttcg aggccaccga gatcctgaag aagcaccgct 3481 gcaacgaccc catctgcgac acgcacctct ggaaggtcaa gcacgagctg gacatgtccc 3541 gcctgcgggt ccgccagctg gagaaggtca tggacaagca cggcatcaag gcgccgcaac 3601 tgaggctggc ctcctcctcg gacctgctga accaccatca tctgaaggag cggccgccac 3661 tgctgggcaa cctgagtctc gccgccagcg cacaagatct atacaggtcg tacaagacgg 3721 aaatcgccga gatggagacg gtgctctgaa gcgtttggag cttttcgagc tgaaagagta 3781 tgatgatgat gatggggagc tgctactcac gacgttatta gagttactgg agccaaaaag 3841 gcgatcctac agcgagtacg tctaatcaaa atcaacgttt caaataaatg taaactgaaa 3901 gctttcgaaa gttagagaca gggagatacg agatagcgaa ggagaaagag aaatagaacc 3961 caaagcgcct cacgaaaacc gcacacaact cgatgatcga taatcggtag tcgataatcg 4021 agaatcaaga cgacgacaaa cctaagaaac ccagaaccca gatatttcca gcctaggaaa 4081 agaaatccca aagattgtat aaagttaaac taaatgtaaa acagtaaaac caacagttaa 4141 actaaatgga acacgtggaa gaggaagaaa caaccaaaaa gcagccgccg cacgagtatt 4201 tcataaaata agttttaaac aagatcagag gaagaagaag aagtagaaga tttagaagag 4261 agagaaactg gggagatcaa ccgttacatt tttggcgatt gaactgttaa ccgttaacaa 4321 ggagaagttg aagaaggaga agaagaagat ggggattagt acccatcatg tttgtatgta 4381 atccgtttga ttgtttgtga ttgttgtttc gtttgttgtc tttttttgga tagtaaatat 4441 atttacgaaa tcatattaaa gtaagcgtat ggcaaagggc agtcacacac acatgcatac 4501 atactactaa cttgcataca tacacacaga caagcaggca cttgttgcca cgcccattat 4561 taaatataca cattaacaga tttatatgta tttaccttgc tatgattacg atgatataaa 4621 tgttattgca tatacacgta catatacata catatacatt taaagaacga aaaacaagaa 4681 atatttacat atgaatatac atgtatgtac gtaattatat tttttctgat tttgatataa 4741 ggaaattgct tatgtgccgc taacaaaaag aaaacacaaa aaaagaagag aaaagaagga 4801 aacccaagaa gaatcaaaac gaaattttca tctcgctagg agataatcac acactaggag 4861 gcttcacttt agttgctcct ttccgctttg ctgggcatct gcttgccagc gttcttttgt 4921 ttcactcaca ttcactttca tttcgcttgc tcgccgagag agagagagag ctaagcccac 4981 accccccctg ctagttcgac tctcttgcat gtggctccaa actaaagtta atgcaaactc 5041 tctctctctc acaagccccc tccacaaaca cacccacacc cacaatcaca gacacactca 5101 cctaactaga aagagataaa aaatatttat aaatgtgcat tgttgttgtg gcgagcaaaa 5161 cgtgcttaaa tcagatttaa agtaaatttg aaatcgaatt aaatatgtac aaaggttaaa 5221 cgattaaacg catgaactaa aaaacgtgaa aacgacatac ataaataatg aatggaacta 5281 aaactaaact aaacttactg aggaagaaga agaagtatcg gaggcgttgt attgtgttgg 5341 tatttgttta tgtgtgtctt ctaaatgttt agcgaggatt acggattacg gtctacggat 5401 tacggattac caatactcaa agcgcaagca aaacgtaaat gtaaacgaaa caaatttaac 5461 taactaacta atgccacttt aaacacagac acacacacac tagtacagca accaaacacg 5521 cacggccctt cagctgtgtg tgtgcttctt tgagactctt tttcgttaac gtcatctttg 5581 ttcaattaaa ccgttatacc gttaaaccgt tatgttcatc gcccacgcca cccactcgcc 5641 gttcaaaacg acgagagcgg tgcgagcgag acagcaactg caacacagca ctacaactag 5701 aacactcgac tgacggacta acgagtgacg agtaacgact aaccgaaaca tcagcgagag 5761 ctgacaacaa caaaaataac aaagacaaac aacaagaaca atgttaacag caaaaacaag 5821 aaaacaaaac aaagaaactt attgagtttt atttgcaaaa gagtgatttt ttgtagtgga 5881 aatattttat acacaagtta cggatgatga ttcgagcgga ggtcatagcg aaatgttaat 5941 tattacgtat atgtatatat tttttaagac aaattgttca aatttattat acgagtacta 6001 ccaaacaaag cgagtcaaaa ccgaaagcta tgccaaaaac tggaaatcga tgttgcagac 6061 aacaatttag cattaaaacg gtggggaggg ggtagaagag aaggactacg aaggactacg 6121 aagggaagat ggcgaagatg aggagcaggg gaagagaagt gaaaacaaaa cctttacgga 6181 caaattaaaa caagtaaaac aagttaacat tacattatat aagtagttag taatttaaaa 6241 ctaaaaaccc aaagaaaata agctaaacat cacgacaaat gatacaaaaa gcgaacaaaa 6301 aaaaggttta tgtatacaaa aagatgtttt ttttaatata ttattaatgt tattaagtta 6361 cgagtgcgaa taacgagcgt acacacacag tcacactgtc cagacaccca caccaacacg 6421 aataacgagt gcattttgtt aggtgttaaa cataaaacat acaaaacgaa tgagaaaaga 6481 aaccagaaaa agaaaaggaa aagaaaaaaa gaagaatcat aaacaaatcg aaatcgaatc 6541 aatttttaaa cgcaaagata tatgtatgta tctccttgaa cataacgaat atctgattct 6601 caaccgagtc aagtccaccg cccacacctg tccacacctg agcgaaggag ggagcgggac 6661 ggaacgacgg ccgatcgatc gtatttcaag ttactaaact aacacgacac aattttttaa 6721 ccacgccaga ggatccagcg atcgagcgac gaagaagcgt ttcacgtaca taaactaagc 6781 aaatggaata tgcgtacatt gttgtggtag ttacagatac agatggcgag gagcatacac 6841 gtaaattaaa atataaacaa accaacttgc aataaatgtg tatacaaaag g