Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017151102 6894 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017151102 VERSION XM_017151102.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151102.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6894 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6894 /gene="Nmdar2" /note="NMDA receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108063847" CDS 543..3752 /gene="Nmdar2" /codon_start=1 /product="glutamate receptor ionotropic, NMDA 2B isoform X1" /protein_id="XP_017006591.2" /db_xref="GeneID:108063847" /translation="MMPSRVKLKSGGRDREEEELQPKSQSNTASYSQHNSNSHSPISI SNPPPLLILLLLLAVLLPSCHALRLTNGGGSLSKGAAANKEQLNIGLIAPHTNFGKRE YLRSINNAVTGLTKTRGAKLTFLKDYSFEQKNIHFDMMSLTPSPTAILSTLCKEFLRV NVSAILYMMNNEQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSTLQLQL APSIEHQSAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERVAEMQEHFKFTILNS IVVTRTSDLMELVNSEARVMLLYATQTEAITILRAAEEMKLTGENYVWVVSQSVIEKK DAHSQFPVGMLGVHFDTSSAALMNEISNAIKIYSYGVEAYLTDPANRDRRLTTQSLSC EDEGRGRWDNGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRSAELKIMNLRPSANNKN LVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPAD PVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGF TYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFMET GIAIVVAKRTGIISPTAFLEPFDTASWMLVGIVAIQAATFMIFLFEWLSPSGYDMKLY LQNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYT ANLAAFMITREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTIHKYFNVMHNY MRQYNKTSVADGVAAVLNGNLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLA FSRNSKYVQMFNKRLLEFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAF LLLMAGILLAALLLLLEHVYFKYIRKRLAKKDGGHCCALISLSMGKSLTFRGAVFEAT EILKKHRCNDPICDTHLWKVKHELDMSRLRVRQLEKVMDKHGIKAPQLRLASSSDLLN HHHLKERPPLLGNLSLAASAQDLYRWSYKTEIAEMETVL" misc_feature 795..1955 /gene="Nmdar2" /note="Type 1 periplasmic binding fold superfamily; Region: Periplasmic_Binding_Protein_type1; cl10011" /db_xref="CDD:471960" misc_feature 2004..3224 /gene="Nmdar2" /note="The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_iGluR_NMDA_Nr2; cd13718" /db_xref="CDD:270436" misc_feature order(2352..2363,2367..2369,2373..2381,2820..2822, 2886..2891,2901..2903,3015..3017,3084..3092,3099..3101, 3117..3119,3165..3176,3183..3185) /gene="Nmdar2" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270436" misc_feature order(2352..2360,2373..2375,2886..2894,3012..3017) /gene="Nmdar2" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270436" polyA_site 6894 /gene="Nmdar2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtcgcaatc agtccgcaga gcgcgctccg ttccgttctg tcctgttctg ttctgttccg 61 ctcgctccgt gtcgttcggt tcgcatccgc atccgcagga gctgcccagc cgacgtccag 121 agtttcggtt tcggtttcag tttcagcttg cgtctccgtt ttccacattt aactgagaac 181 tgagctgatc tgtgctgagc ctggcttggc cacaagcggc taaaacgaac ttgggaactg 241 ggaacttgag actggactag acctagacta gaacttgacc cggactagac ctagactgga 301 ctagactaga cccaaaagtg agcctaggat gcgaacgtaa accaatgcac agcagccaat 361 acaatcacaa caactccccg gggaagcgaa cagagggcca ggcaatccat ccacacaccg 421 atcaatatcc cctcgaatat cgaatatatc aaatagcagc ccatcccggc cagatgcact 481 agagaccagc cggagcacgg agcaccgagc accggatccc agcgaactca agtccacaag 541 ccatgatgcc cagtcgcgtc aagctgaaat cggggggcag ggatcgggag gaggaggagt 601 tacagccgaa gtcacagtcc aacactgcca gttacagcca gcacaatagc aatagccatt 661 ccccgatctc gatctcgaac cctccgccac tgctgatcct cctcctcctg ctcgctgtgc 721 tcctgccctc ctgccacgcc ctccggctga ccaacggggg cggcagcctg agcaagggcg 781 cggcggccaa caaggagcag ctcaacatcg gcctgatcgc cccgcacacg aacttcggga 841 agcgggagta cctgcggagc atcaacaacg cggtcaccgg actcacgaag acgcgcggcg 901 ccaagttgac cttcctcaag gactactcct tcgagcagaa gaacatccac ttcgacatga 961 tgtcgctgac gcccagtccc acagccatcc tgagcacctt gtgcaaggaa ttcctgcgcg 1021 tgaacgtctc ggccatcctg tacatgatga acaacgaaca gttcggccac agcacggcct 1081 cggcgcagta cttcctgcag ctggccggct acctgggcat cccggtgatc tcgtggaacg 1141 ccgacaactc gggcctggag cgccgggcct cccagtcgac gctgcagctg cagctggcgc 1201 cgagcatcga gcaccagagc gccgccatgc tgagcatttt ggagcgctac aagtggcacc 1261 agttctcggt ggtcacctcg cagatagccg gccacgatga cttcgtgcag gcggtgaggg 1321 agcgcgtggc cgagatgcag gagcacttca agttcaccat cctcaactcg atagtggtta 1381 cgcgcaccag cgacctgatg gagctggtca acagcgaggc acgcgtgatg ctgctctatg 1441 ccacgcaaac ggaggccatc accattctgc gggccgccga ggagatgaag ctcaccgggg 1501 agaactatgt gtgggtggtc agccagtcgg tgatcgagaa gaaggacgcc cactcgcagt 1561 tccccgtcgg catgctgggc gtccacttcg acacctccag tgcggcgctg atgaacgaga 1621 tctccaatgc catcaagatc tacagctacg gcgtggaggc ctacctcacg gacccggcca 1681 atcgggaccg ccgcctcacc acccagtcgc tctcctgcga ggacgagggt cgtggtcgct 1741 gggacaacgg agaaatcttc ttcaagtact tgcgcaacgt gtccatcgag ggggacctca 1801 ataagccgaa catcgagttc acggctgacg gggacctgcg ctcggcggag ctcaagatca 1861 tgaatctccg gcccagcgcc aacaacaaga acctggtgtg ggaggagatt ggagtgtgga 1921 agtcgtggga gacgcagaag ctggacatcc gcgacattgc gtggcccggc aactcgcacg 1981 ccccgcccca gggcgtgccg gagaagttcc atttgaagat cacattcctc gaagaggcac 2041 cctatatcaa tctgtcgccc gcggaccccg tgagtggcaa gtgcctgatg gaccgcggtg 2101 tgctctgccg ggtggcggcc gaccacgaaa tggccgccga catcgacgtg ggccaggcac 2161 accgcaacga gtccttctac caatgctgca gcggcttctg catcgatctg ctcgagaagt 2221 tcgccgagga gctgggcttc acctacgagc tggtgcgggt cgaagatggt aaatggggta 2281 ccctcgagaa tggcaagtgg aacggcctga tcgccgacct ggtcaaccgc aagacggaca 2341 tggtcctcac ctcgctgatg atcaacacgg agcgggaggc ggtcgtcgac ttctccgagc 2401 ccttcatgga gacgggcatc gccatcgtgg tggccaagcg cacgggcatc atctcgccca 2461 cggccttcct cgagcccttc gacacggcct cctggatgct ggtgggcatc gtggccatcc 2521 aggcggccac cttcatgatc ttcctcttcg agtggctctc gcccagcggc tacgacatga 2581 agctctacct gcagaacacc aacgtgaccc cgtaccgctt ctccctcttc cgcacctact 2641 ggctggtctg ggccgtcctc ttccaggccg ccgtccacgt ggactcgccg cgcggcttca 2701 cctcgcgctt catgaccaac gtgtgggcct tgttcgccgt ggtcttcctg gccatctaca 2761 ctgccaacct ggccgccttc atgataacca gggaggagtt ccacgagttc agcggtctca 2821 acgacagccg tctggtgcat cccttctccc acaagccctc cttcaagttc ggcaccatcc 2881 cgtacagcca cacggactcg accatccaca agtacttcaa cgtcatgcac aactacatga 2941 ggcagtacaa caagaccagc gtggccgacg gagtggccgc cgtgctcaac ggcaacctgg 3001 actccttcat ctacgacggc actgtgctgg actatctggt ggcccaagac gaggactgcc 3061 ggctcatgac cgtgggcagc tggtatgcga tgacgggcta cgggctggct ttcagccgca 3121 actccaagta cgtgcagatg ttcaacaagc gactgctcga gttccgggcc aacggggacc 3181 tggagcggct gcggcgctac tggatgacgg gcacgtgccg accggggaag caggagcaca 3241 agtcctccga tccgctggcc ctcgagcagt tcctgtccgc cttcctgctc ctgatggccg 3301 gcatcctgct ggcggccctg ctgctgctgc tcgagcacgt ctacttcaag tacatccgca 3361 agcggctggc caagaaggac ggcggccact gctgtgcgct catctcgctc tccatgggca 3421 agtcgctgac cttccggggc gccgtcttcg aggccaccga gatcctgaag aagcaccgct 3481 gcaacgaccc catctgcgac acgcacctct ggaaggtcaa gcacgagctg gacatgtccc 3541 gcctgcgggt ccgccagctg gagaaggtca tggacaagca cggcatcaag gcgccgcaac 3601 tgaggctggc ctcctcctcg gacctgctga accaccatca tctgaaggag cggccgccac 3661 tgctgggcaa cctgagtctc gccgccagcg cacaagatct atacaggtgg tcgtacaaga 3721 cggaaatcgc cgagatggag acggtgctct gaagcgtttg gagcttttcg agctgaaaga 3781 gtatgatgat gatgatgggg agctgctact cacgacgtta ttagagttac tggagccaaa 3841 aaggcgatcc tacagcgagt acgtctaatc aaaatcaacg tttcaaataa atgtaaactg 3901 aaagctttcg aaagttagag acagggagat acgagatagc gaaggagaaa gagaaataga 3961 acccaaagcg cctcacgaaa accgcacaca actcgatgat cgataatcgg tagtcgataa 4021 tcgagaatca agacgacgac aaacctaaga aacccagaac ccagatattt ccagcctagg 4081 aaaagaaatc ccaaagattg tataaagtta aactaaatgt aaaacagtaa aaccaacagt 4141 taaactaaat ggaacacgtg gaagaggaag aaacaaccaa aaagcagccg ccgcacgagt 4201 atttcataaa ataagtttta aacaagatca gaggaagaag aagaagtaga agatttagaa 4261 gagagagaaa ctggggagat caaccgttac atttttggcg attgaactgt taaccgttaa 4321 caaggagaag ttgaagaagg agaagaagaa gatggggatt agtacccatc atgtttgtat 4381 gtaatccgtt tgattgtttg tgattgttgt ttcgtttgtt gtcttttttt ggatagtaaa 4441 tatatttacg aaatcatatt aaagtaagcg tatggcaaag ggcagtcaca cacacatgca 4501 tacatactac taacttgcat acatacacac agacaagcag gcacttgttg ccacgcccat 4561 tattaaatat acacattaac agatttatat gtatttacct tgctatgatt acgatgatat 4621 aaatgttatt gcatatacac gtacatatac atacatatac atttaaagaa cgaaaaacaa 4681 gaaatattta catatgaata tacatgtatg tacgtaatta tattttttct gattttgata 4741 taaggaaatt gcttatgtgc cgctaacaaa aagaaaacac aaaaaaagaa gagaaaagaa 4801 ggaaacccaa gaagaatcaa aacgaaattt tcatctcgct aggagataat cacacactag 4861 gaggcttcac tttagttgct cctttccgct ttgctgggca tctgcttgcc agcgttcttt 4921 tgtttcactc acattcactt tcatttcgct tgctcgccga gagagagaga gagctaagcc 4981 cacacccccc ctgctagttc gactctcttg catgtggctc caaactaaag ttaatgcaaa 5041 ctctctctct ctcacaagcc ccctccacaa acacacccac acccacaatc acagacacac 5101 tcacctaact agaaagagat aaaaaatatt tataaatgtg cattgttgtt gtggcgagca 5161 aaacgtgctt aaatcagatt taaagtaaat ttgaaatcga attaaatatg tacaaaggtt 5221 aaacgattaa acgcatgaac taaaaaacgt gaaaacgaca tacataaata atgaatggaa 5281 ctaaaactaa actaaactta ctgaggaaga agaagaagta tcggaggcgt tgtattgtgt 5341 tggtatttgt ttatgtgtgt cttctaaatg tttagcgagg attacggatt acggtctacg 5401 gattacggat taccaatact caaagcgcaa gcaaaacgta aatgtaaacg aaacaaattt 5461 aactaactaa ctaatgccac tttaaacaca gacacacaca cactagtaca gcaaccaaac 5521 acgcacggcc cttcagctgt gtgtgtgctt ctttgagact ctttttcgtt aacgtcatct 5581 ttgttcaatt aaaccgttat accgttaaac cgttatgttc atcgcccacg ccacccactc 5641 gccgttcaaa acgacgagag cggtgcgagc gagacagcaa ctgcaacaca gcactacaac 5701 tagaacactc gactgacgga ctaacgagtg acgagtaacg actaaccgaa acatcagcga 5761 gagctgacaa caacaaaaat aacaaagaca aacaacaaga acaatgttaa cagcaaaaac 5821 aagaaaacaa aacaaagaaa cttattgagt tttatttgca aaagagtgat tttttgtagt 5881 ggaaatattt tatacacaag ttacggatga tgattcgagc ggaggtcata gcgaaatgtt 5941 aattattacg tatatgtata tattttttaa gacaaattgt tcaaatttat tatacgagta 6001 ctaccaaaca aagcgagtca aaaccgaaag ctatgccaaa aactggaaat cgatgttgca 6061 gacaacaatt tagcattaaa acggtgggga gggggtagaa gagaaggact acgaaggact 6121 acgaagggaa gatggcgaag atgaggagca ggggaagaga agtgaaaaca aaacctttac 6181 ggacaaatta aaacaagtaa aacaagttaa cattacatta tataagtagt tagtaattta 6241 aaactaaaaa cccaaagaaa ataagctaaa catcacgaca aatgatacaa aaagcgaaca 6301 aaaaaaaggt ttatgtatac aaaaagatgt tttttttaat atattattaa tgttattaag 6361 ttacgagtgc gaataacgag cgtacacaca cagtcacact gtccagacac ccacaccaac 6421 acgaataacg agtgcatttt gttaggtgtt aaacataaaa catacaaaac gaatgagaaa 6481 agaaaccaga aaaagaaaag gaaaagaaaa aaagaagaat cataaacaaa tcgaaatcga 6541 atcaattttt aaacgcaaag atatatgtat gtatctcctt gaacataacg aatatctgat 6601 tctcaaccga gtcaagtcca ccgcccacac ctgtccacac ctgagcgaag gagggagcgg 6661 gacggaacga cggccgatcg atcgtatttc aagttactaa actaacacga cacaattttt 6721 taaccacgcc agaggatcca gcgatcgagc gacgaagaag cgtttcacgt acataaacta 6781 agcaaatgga atatgcgtac attgttgtgg tagttacaga tacagatggc gaggagcata 6841 cacgtaaatt aaaatataaa caaaccaact tgcaataaat gtgtatacaa aagg