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LOCUS XM_017151091 2476 bp mRNA linear INV 09-DEC-2024 domain-containing protein hfw (hfw), mRNA. ACCESSION XM_017151091 VERSION XM_017151091.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151091.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2476 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2476 /gene="hfw" /note="leucine-rich repeat domain-containing protein hfw; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108063842" CDS 356..2071 /gene="hfw" /codon_start=1 /product="protein halfway" /protein_id="XP_017006580.2" /db_xref="GeneID:108063842" /translation="MLAYSHCSRLLLLLLLVAGACARPETVQDSQDEPGTAIPAPISA GNEVEATTPSTPVETITQSTSNSVAVTEVATTTATASSTSSSSTSTTSAAPLPPAAPE VPEYFKHCFYAEEQLCGHSFDGRGDAGEGQAAATTTTPQCQCREHPRKANSWYCCNIS QLTMISSCSNISKWTSLHVRNMTMEDMDLSNPIFRSLQSLAVTDGNITRLVNAFPRLS ALKCLNISNNNISEIQPRAVKDVPHLEFFGMSNNNLSLVPHRNQNKNITLDISGNTRM LCNPLNEIIYNESINFVNPKHSYCQYNVTSTWFQSTDKVSVEQLENRKRCMTNCPVIP NYGSCNCTLQKIMIIQDNQSKPQCHVDCSNLGLVELPQRLPDNTFMLNISNNKITRLG DYFQTNPTYYNINRLVADNNQITSIYEFEGTKFIETFQRIYMRNNSLSKIPEYFLNNA LMDSGLGRRIYLAGNKLVCDCNSAKTLQNWLKERSSDIPDYMEIRCRNLPQNVYELQE AKLCQSPPDWTDYIYYLIAAEVILLLALIAKVSYDYWVFKTAGYLPWPASKMPKLPCD WLCES" misc_feature <827..>1174 /gene="hfw" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 944..1012 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1013..1084 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1085..1147 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1148..1297 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1298..1384 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1385..1495 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1496..1564 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1565..1642 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1643..1705 /gene="hfw" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" polyA_site 2476 /gene="hfw" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggtgctctgc taagcgcgca taacagttgt ctttgctttt gttttgttcg cactcgagcg 61 aattgaatat tgaattgaga taagatattt tcgtatttgg cccactaaac acgtcggagt 121 gaatattttc atgtgcgatt gggcggcaga tcacttggca gagctaccag gatcgtgaga 181 agcgccggaa aagagctcct ttgcgccggg actgggatgt gcgcaaatca tttaaactgc 241 gatcctcgga tgtcgacgtc catttggtgc aggatcccac gtcgccccgt ccaggagtaa 301 ctgcctccag actcagctgg ctggaaaccc gagggaattc gactttagag ccgatatgtt 361 ggcctactcc cactgctcac ggctcctcct gctgctcctc ctcgtggcag gcgcatgcgc 421 gcggccagaa acagtgcagg attcgcagga tgagccagga acagccatac cggctcctat 481 ctccgcggga aatgaagtgg aagctaccac gccatcaact ccggttgaga ccatcaccca 541 aagtacctcc aattcggtgg ctgtgactga agtagccacc acaacggcca cggcctcgtc 601 cacgtcgtcc tcctccactt cgaccacctc ggctgcgccg ctgccgccgg ctgctcccga 661 ggttccggag tacttcaagc actgcttcta cgccgaggag cagctgtgcg gccacagctt 721 cgatggacgc ggcgatgccg gcgagggaca ggcggcggcg acgacgacga cgccacaatg 781 ccagtgcagg gagcacccga ggaaggccaa ctcctggtac tgctgcaaca tatcgcagct 841 gacgatgatc tccagctgca gcaacatctc gaagtggacc agcctgcatg tgcgcaacat 901 gaccatggag gacatggacc tgtccaatcc catcttccga tcgctgcaat ccctggccgt 961 gacggacggc aacatcacgc gactggtgaa cgcctttccc cggctctcgg ccctcaagtg 1021 cctgaacata tcgaacaaca acatctcgga gatccagccg cgcgcagtca aggatgtgcc 1081 gcatctggag ttcttcggca tgtcgaacaa caacctgtcg ctggtgcccc atcgcaatca 1141 gaacaagaac ataacgctgg acatcagtgg caacacgcgc atgctgtgca acccgctcaa 1201 cgagatcatc tacaacgaga gtatcaactt tgtgaacccc aagcactcct actgccagta 1261 caacgtcacc agcacctggt tccagtccac ggacaaggtg tccgtcgagc agctggagaa 1321 caggaagcgc tgcatgacca actgtccggt gatcccgaac tacggcagct gcaactgcac 1381 gctgcagaag atcatgatca tccaggacaa ccagtcgaag ccccagtgcc acgtcgactg 1441 ctccaatctg ggactggtgg agctgccgca gcgactgccc gacaacacct tcatgctgaa 1501 catctcgaac aacaagatca ccaggctggg cgactacttc cagacgaacc cgacctacta 1561 caacatcaac cgactggtgg ccgacaacaa ccagatcacc tccatctacg agttcgaggg 1621 caccaagttc atcgagacct tccagcgcat ctacatgcgc aacaattcgc ttagcaagat 1681 acccgaatac tttctaaaca acgccctgat ggactcgggg ctgggtcgtc gcatctacct 1741 ggccggcaac aagctcgtct gcgactgcaa ctcggccaag acgctgcaga actggctgaa 1801 ggagcgcagc tccgacatac ccgactacat ggagatacgc tgccgcaacc tgccccagaa 1861 tgtctacgag ctgcaggagg ccaagctgtg ccagtcgccg cccgactgga ccgactacat 1921 ctactacctg atagccgccg aggtcatcct gctgctggcg ctcatcgcca aggtctccta 1981 cgactactgg gtcttcaaga cggccggcta tctgccgtgg ccggctagca agatgcccaa 2041 gttgccctgc gactggttgt gcgagtcgta agcgcggatt ggagcttgaa aaaacatcga 2101 cagtttgaaa tttctctata tttaaaggga gttttccctt tatcgtatcg atactgtgaa 2161 aaatatcgaa aatatcgatc atttttaagc actagcttgg acttgcaggg gtttttatag 2221 aggagacaga cagaaaattt ctttaccgtg acataatcac atgacagttt gctatttctc 2281 gatatttaaa ggaagttttc cctttatcgt atcgatactg tgaaaaatat cacatgacag 2341 aactttgtgc cttttatata tatacgattt ttgttgtcaa tagttaatag ccctaagaac 2401 tgtatgcatg ttattgtcgt aaacttgtag tgggtgcatc tggaaatata cgtaaacgca 2461 gtaacgtgga tcagaa