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LOCUS XM_017151083 1451 bp mRNA linear INV 09-DEC-2024 (Adar), transcript variant X11, mRNA. ACCESSION XM_017151083 VERSION XM_017151083.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151083.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1451 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1451 /gene="Adar" /note="Adenosine deaminase acting on RNA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108063839" CDS 5..1306 /gene="Adar" /codon_start=1 /product="double-stranded RNA-specific editase Adar isoform X4" /protein_id="XP_017006572.1" /db_xref="GeneID:108063839" /translation="MLNSANNNSPQHPVSAPSDINMNGYNRKSPQKRRYEMPKYAVSP KKKTCKERIPQPKNTVAMLNELRHGLIYKLESQTGPVHAPLFTISVEVDGQKYLGQGR SKKVARIEAAATALRSFIQFKDGAVLSPLKPSGNLDFTSDEHLENGIENLSNKQLVEI IEPLMLTEKKSNLTSLEQPTLRLQMFCMSQNVSKSAITVDGQKKVPDKGPVMLLYELF NDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKLAKNAAAKAALASLCNISYS PMVVPQKNVPLPIDDKSSSMELPQIHADTIGRLVLEKFMEVIKGQEAYSRRKVLAGIV MTENMNFCEAKVISVSTGTKCVSGEHMSVNGAVLNDSHAEIVSRRCLLKFLYAQLDLQ CNQEKLAASCVQKSSPVRGRFQSKAVMEYRRGMACCRANAC" misc_feature 173..361 /gene="Adar" /note="first double-stranded RNA binding motif of STRBP, ILF3, RED1, RED2 and similar proteins; Region: DSRM_STRBP_RED-like_rpt1; cd19865" /db_xref="CDD:380694" misc_feature order(173..175,182..187,194..199,203..205,245..250, 254..256,260..262,311..319,326..328) /gene="Adar" /note="RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380694" misc_feature 626..>766 /gene="Adar" /note="double-stranded RNA binding motif (DSRM) superfamily; Region: DSRM_SF; cl00054" /db_xref="CDD:444671" misc_feature 905..>1195 /gene="Adar" /note="Adenosine-deaminase (editase) domain; Region: A_deamin; cl02661" /db_xref="CDD:470647" ORIGIN 1 agtcatgtta aacagcgcaa ataacaattc tccccagcac ccggtgagtg caccatctga 61 tatcaacatg aacggatata accggaagtc gcctcaaaaa cggcgctatg agatgccaaa 121 atatgctgta tcaccaaaaa agaaaacctg caaggagcgc attccgcagc caaagaatac 181 ggtggcaatg ctgaatgagt taagacatgg actgatttac aaattggagt cacagactgg 241 tccggtgcac gcacctttat ttacgatatc cgttgaggtc gatggacaga aatacttggg 301 ccagggtcgc agtaaaaaag ttgcacgcat cgaggcagct gccacagcac tgcgaagctt 361 tatacaattc aaggacggag ccgtcttgtc gccattgaag ccatcgggca acttggactt 421 taccagcgat gaacatctag aaaatggtat tgaaaatttg tccaacaaac aattggtcga 481 gatcattgag ccgttgatgt tgactgaaaa gaaatccaac cttacctcgc ttgaacaacc 541 cacgttgcgt cttcaaatgt tttgcatgag tcagaatgtc agcaagagtg ccatcactgt 601 tgacggtcaa aagaaggttc cggacaaggg tcccgtaatg ctgctctacg aattgttcaa 661 cgatgttaat tttgaatgca ttaatattga cggagctcaa aacaattgtc gcttcaagat 721 gaccgtcacg attaacgaaa agaagttcga tggaacaggt ccttccaaaa agctggcgaa 781 aaatgctgcg gccaaagcgg cacttgcctc gttgtgcaac atttcctaca gtccaatggt 841 ggtgccacaa aagaacgtac cccttccaat cgacgacaag tcgtcatcca tggagttgcc 901 gcagatacat gccgatacga ttggacgcct ggttttggag aagttcatgg aagtaatcaa 961 gggccaggag gcctactcgc gtcgaaaggt attggcgggc attgttatga ctgaaaacat 1021 gaatttttgt gaagccaaag ttatttcagt ctcgacgggc accaagtgtg tcagcggcga 1081 gcatatgagt gtgaacggag ctgtcctgaa cgattcccat gccgaaatag tgtctaggcg 1141 ttgtctcctc aagttcttgt atgcacagct ggatcttcag tgcaatcagg aaaagctcgc 1201 ggccagttgc gtacaaaaat cgagtccggt gaggggacga ttccagtcaa aagcagtgat 1261 ggaatacaga cgtgggatgg cgtgctgcag ggccaacgct tgctgacaat gtcgtgctcg 1321 gacaaaattg cacgatggaa catcgtgggt atacaaggct ccttgttgtc ttccataatt 1381 gaaccagtgt acctgcattc gattgtgctg ggcagtttgc tgcacccaga gcacatgtac 1441 cgtgcagtgt g