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LOCUS XM_017151060 1694 bp mRNA linear INV 09-DEC-2024 (Sec22), mRNA. ACCESSION XM_017151060 VERSION XM_017151060.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151060.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1694 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1694 /gene="Sec22" /note="vesicle-trafficking protein SEC22; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063830" CDS 391..1026 /gene="Sec22" /codon_start=1 /product="vesicle-trafficking protein SEC22b" /protein_id="XP_017006549.1" /db_xref="GeneID:108063830" /translation="MALLTMIARVIDGLPLVGTMQDDEQSGRSILDYQNQAKMLFRKL GTHSPARSSIETGPYLFHYLIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYGRR VNSVTRPYAFIEFDVYIQKAKKQLTDRRRNISSINTQLQDVQRIMVQNIDDVLQRGTV LAELDTKTQNLSMMSQKYKKDAKLLNRKSMYVKAAAVGIIFLVFIMYFWVL" misc_feature 397..765 /gene="Sec22" /note="longin domain; Region: Longin; cd14824" /db_xref="CDD:341428" misc_feature order(397..399,487..489,496..498,556..558,565..567, 571..573) /gene="Sec22" /note="lipid binding site [chemical binding]; lipid-binding site" /db_xref="CDD:341428" misc_feature order(433..435,442..444,448..450,490..492,502..504, 739..741,751..753,760..762) /gene="Sec22" /note="Sec22 interface [polypeptide binding]; other site" /db_xref="CDD:341428" misc_feature order(553..555,562..564,622..624,634..636) /gene="Sec22" /note="VARP interface [polypeptide binding]; other site" /db_xref="CDD:341428" misc_feature 778..969 /gene="Sec22" /note="SNARE motif of SEC22; Region: R-SNARE_SEC22; cd15866" /db_xref="CDD:277219" misc_feature order(784..792,796..801,805..822,826..834,838..840, 847..852,856..864,868..885,889..906,910..927,931..948, 952..960) /gene="Sec22" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277219" misc_feature 859..861 /gene="Sec22" /note="zero layer; other site" /db_xref="CDD:277219" polyA_site 1694 /gene="Sec22" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acccccaatc ccaatccaat cccaatccgc ccgccgcccg cgacgttgca acacagagtt 61 ttgtggcacc acatcacgaa tcacgaacac caggtgcccc aattgaggca gcaatctcct 121 ccagccaacc gggcgaaacg gaggagcact agcactccag gagccagccg ccgatcagct 181 gagttgtgaa ctcgaaaatc gaaggaagac tgggacgccc tgacagaaac ttcactggat 241 tggataggat tggactagaa actggacggg agccacatcg gtagcaataa gtagcgagcg 301 agcgacggcg gaaaagtgca gccgtggcca aaagcgattg gcaaaccgag atagaagccc 361 acggatcagg ataaaccata aaccggagcc atggcgctgc tgaccatgat agccagagtc 421 atcgatggcc tgccgctggt ggggaccatg caggatgacg agcagagcgg ccgcagcata 481 ctggactacc aaaaccaggc caagatgctc ttccgcaagc tgggcaccca ctcgccggcc 541 aggagcagca tcgagacagg accctaccta ttccactatc ttatcgagaa cgacgtgtgc 601 tacctggtga tggtggacaa gatgtactcg aagcgactgg cctttaatta cctagaggat 661 ttggcccagg agttccatgc caactacggc aggcgggtga actcggtgac gcggccctac 721 gccttcatcg agttcgacgt ttacatacag aaggcgaaaa agcagttgac cgaccgcaga 781 cgcaacatca gcagcatcaa cacacagctg caggatgtgc agaggattat ggtccagaac 841 attgacgacg tgctccaacg tggcacagtg ctggcggaac tcgacaccaa gacccagaac 901 ctctcgatga tgtcgcaaaa gtacaagaag gacgccaagc tgctcaaccg caagtccatg 961 tacgtgaagg cggccgccgt gggcatcata ttcctagtgt tcatcatgta cttctgggtt 1021 ctgtaatagt cgctagcaca gatctggagc ggtgcgctct gttctttgtt atatgtacgt 1081 cgagcgtcag agacgcgcgg cgacccaaag acatttagat tatgcgtaca cctgtactcc 1141 accagaaaaa gacacacaca catgatgccc ccacatatga ttcataatca ggcaaaccct 1201 ttgacacgcg caccgcttcc gaggcttctt gtttaacttg taatattcac ttacctttgc 1261 gttatttacg gtcttggatt ccattaacta ttaattccca tttcaattcg ctttctacgc 1321 tctacgctct acgcttctct tgtttgcgca ggttttctgc atatttgatt acgaatcgag 1381 tctaatttag ccagccgacc gaccgacctt tgagccaagt tgaatctgta aattataaac 1441 gccgatgccg atccgtgtgt gtgtgtataa atgtctagat tgtagatgga atcgctgtgc 1501 cgattccaaa tccggcgggg tttaatcaat aaatagctgc aaaagcatag caaggaaaac 1561 gataagaaaa gaaaagaaag gataagaaac gatacaagtt ttaggcaatt tatatgtata 1621 aaattaaggc aaataaatca atttacattg tttaataaaa actccatata aaggtattgt 1681 acctacccaa acga