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LOCUS XM_017151058 6781 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X13, mRNA. ACCESSION XM_017151058 VERSION XM_017151058.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151058.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6781 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6781 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063827" CDS 534..5171 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X12" /protein_id="XP_017006547.2" /db_xref="GeneID:108063827" /translation="MEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSH QVGGGATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEW VNNKLRDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFA GSGSNPEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLT LAPLSSISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSS TTTTTTSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEG TGTGTNLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCD ISVPVYATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSG SASSPSKSLKTSSSLSPAKRSGSESPKNAKARVHLQPRTTSTSHTNQQHLQPQSFHTH THHQHHTLPHQYQVQNHNHQLGAYTLAPSSGQITLPRPHGHALQTPTASKAPSPLQQH MRGTVISDLSFESGLSDDYALPPDAVSESTCMDASMPSLLMRQSYVDSPSKKIESLEK MGHLAKLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQLDEACRINRAEGAS TFEIDTGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRDDQKPTVQGWVTKVK NGHPKKCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHVSDSDSEEREDAAQD QARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAGTQYEQLVQKLMETD GDPNCVLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQLFMSVAVNQPGIDY HVVLAQNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQVNKKLGKQTRQLLLC ATQSLFTCDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAYSFVQGWQLLALAVS LFVPRSSRLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKNGGRETKPSRMEVLS ILLKNPYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAHELGTRDASNGFCLF SDDPIEKDLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVIQLSYKNRLYWKHTI KCETDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSRDVGVGL KGLDKFYPYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVRIYLTCCRKWPYFGA CLFQAKPRQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAPVARYPYSSVMTFGG CQDDFMLVVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALGHTVPGTPQMNSLTR NGSHRSLRASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHATHTLNSNHSHTLSS SHHAGGGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKSTPDHQRIK" misc_feature <729..>956 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 2403..2690 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 2721..3026 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 3144..3803 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 3831..4133 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 3840..4502 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 4488..4799 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 6781 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgagtcgtt cacttcgctg ttcgttcggc aaccgattag ttaacaaact gcgccggtta 61 acttgattgg aattctttaa attgtttttt tactgtgcca cttactcaaa ggtttttgca 121 aatatttctg tagtgactga agtgtgtgtt ccaaagaaac ccagtcgaaa gtaccaagaa 181 caggaacaga aattgaaaag aaaaccaacc cttcgccggg ctttagttat cgctcgcgat 241 cgtccgaaac cccgaaaccg gtttcccctc ctgcaaatcc aaccgacttt gccccttttt 301 gttctcgagg gctctagccc tatgccgaaa tcaaccccga acccctaaac ctaaaccgaa 361 accgaaactt aacccctgtg cgcggcactg tcatggcaat gaacctttgc ccgatcttat 421 aagaatcggt aaaatcgagt ggactgctaa aatcccagtg aaaatggcga aaattgaaat 481 agcgaaatca gcgaaaaagg gccggcgcac agaatgtcct cgatgtgcgt gccatggagc 541 agcggctgag tgagtggccc aagccaccgc cccagcatcc gcatccgcac cagccagtgc 601 cagccagtca tccgcaggag cagcagcagc agcagcaggc cagaagcaat tgttcgccga 661 gccatcaggt cggaggagga gccacggcag caggatcaac agtatcaggt gcaccaccgc 721 ccacccagga ggcggagaag accatcactt cgctggagat ccaggtggag gaacagagac 781 agctgcgact ccacgacgca cgacaaatcg aggccaaggc ggccaagatc aaggagtggg 841 tgaacaacaa gctacgcgat ctcgaggagc agaaccagtt gctgcgcgaa cagaacgtca 901 agtgcaacca gcagttggag ctgctcaaga atcacatagc caatcaatcg cagcgccaca 961 gtatcgtggg tccggtgcgc aatagcctca gcctagacgt tcaggacttt gccggttcgg 1021 ggtccaatcc cgagcatcgc aggcgaagcg agagtctcga tccgcaggat cccattattg 1081 gccgaccgct gaccagctcg tatccgcatc accagcacag gcgaaacctc tcgatggagc 1141 cgcaggaatt ggaacgaaat ctggtggccg ctgtcgatgg cctaaccctt gccccgctgt 1201 ccagcatctc cagcaaagct cccggatcag ctgccaggcc agatagctcc gatacggata 1261 cggcccatga ttatgcggag atttacacgc catcctgcga aaagctaccc gcctggatga 1321 agaacaatcc ggcattgatg gccagtggcg ggaattccag caccaccacc acaaccacca 1381 gtgaactggg cgtgccacgg cctccgacgc cgccgctgca tcgctttccc agctgggagg 1441 ccaagatcta ccaggtggcc aacgatggac tggcgggagc tggcggaggg acggcggaga 1501 gtgcggccat tcaggagcca gatattcaag agggaacggg cacgggaacg aatctctcca 1561 atggccgacg acatggtcac agtcatggat ctggaacggg aacggtaacg gcgggaactg 1621 gggatgggca cggtaccctg ggcagtacac cgggaacgcc gctgccaccg tcgaggcaac 1681 aacaaaccgc cagcggcggc ttctgtgata tatccgtgcc cgtctacgca acggtcaagg 1741 gtcgagcctc gcagatccgc tcgatgccat ttacgggcga ttcgagcgat gactccagtg 1801 atggcgagga ccatgcggtg atgctcaccc atcattcaca caactcgtcg agcaccgaga 1861 acacggagac ctcgacatcg ggcagcgctt cgagtccctc gaagagcctg aagacctcct 1921 ctagcctaag tccggccaag cgaagtggtt cggagagtcc caagaacgcg aaggcgcgtg 1981 tccacctcca accacgcacc acatccacca gccacaccaa ccaacagcat ctccaaccgc 2041 aatcgttcca tacgcatacg caccaccaac accacacact gccccaccaa taccaagtcc 2101 agaatcataa ccaccagttg ggggcctaca cgctggcgcc ttcgagtggg cagataacgc 2161 tgccgcgtcc ccatggccac gccctccaaa ctccaaccgc ctccaaagcc ccctcacccc 2221 tccagcagca catgcgtggc acagtaattt cagatctctc ctttgaatca ggcctctcgg 2281 acgactacgc cctgcccccc gacgccgtgt cggagtccac gtgcatggac gcctcgatgc 2341 cgtcgctgtt gatgcgacag tcctacgtgg attcgcccag caaaaagatt gagtcgctgg 2401 agaagatggg tcacctggcc aagctgggtg gcaagctgaa gacttggcgc aagcgttggt 2461 tcgttctaaa gaacggatcc ctcaactact ggaagagcca gcacgatgtg cagcggaagc 2521 cccaggggca gatccaactg gacgaggcct gtcgcatcaa tcgggcggag ggagcctcca 2581 ccttcgagat agacacgggc aagaaggtct actacctcac ggcggactcg catgccacca 2641 tggacgattg gatccgggtg ctgcagaatg tgcagcgaag gaatgccacc aagctgctgc 2701 tgagtcgcga tgaccagaag ccgacggtgc agggttgggt gaccaaggtg aagaacggcc 2761 atcccaagaa gtgctggtgt gtgctgttgg gcaagatgtt cctctacttc aaggctcctg 2821 ttgagacgaa tcccctgggc cagattaata tgcgcgatgc ccgagtcgag gaggtggaac 2881 acgtttctga ctcggactcc gaggagcgag aggatgccgc ccaggatcag gcccgactca 2941 cggtggccat ctatccggcg caccagggac caacctacct gatcctgtcc gggaagccag 3001 agcgggataa ttggctctat cacctaactg tcgtttcggg cggcggccca agtgctggca 3061 cccagtatga acagctcgta cagaagctca tggaaacgga tggcgatcct aactgcgtcc 3121 tgtggcgcca tcccattctg ctgcacacca aagacaccat caccgcgccg ctctcatcaa 3181 tgcacacgga aaccatgcag ccggaggcca ttaagctctt caagagcatt cagctgttca 3241 tgtcggtggc ggtcaaccag ccgggcatcg attaccacgt ggtgctcgcc cagaacgccc 3301 tgcaacatgc tctggatatg cccgagctgc agacggagat gatctgcata ctgatcaagc 3361 agacctcccg ccacatgggc cagaagctca gtgtcggcgt ccaggtaaac aagaagctgg 3421 gcaagcaaac gcgccaacta ctgttgtgcg ccacccaaag cctattcacc tgtgataccc 3481 aacaggcggg ccacgcccaa gccaacggca gttcgcccac ctccatacag gctcctgctg 3541 ccacgcccat aatcgactgc aaaagcaacc cgcccgccta cagcttcgtc cagggctggc 3601 agctcctggc cctggccgta tccctctttg ttccgcgctc gagtcgcctg ctgtggtacc 3661 tcaagctcca cttgtcccgg aatgcggata caaagacaga gacgggcaag tacgccgcct 3721 actgtgagcg cgcgctggag aggacgctta agaacggggg ccgcgagacg aaaccgtcgc 3781 ggatggaggt tctatcgatt ctcctgaaga atccctacca ccactctctg ccgcatgcga 3841 ttcccgtgca catgatgaac accacctacc aggtggtttc ctttgatggc tccaccacca 3901 tcgaggagtt ccaggccact ttggcccacg aactgggcac gcgggatgcc agcaatgggt 3961 tctgcctatt cagcgacgat ccaattgaga aggatctgga gcactacctg gagccgctgg 4021 ccaagctgtg cgacgtgatc agcaaatggg agacggcttt aagggagaag ggatcgggga 4081 agtttgagaa ttcgcgggtg atccagctga gctacaagaa ccgtctctac tggaagcaca 4141 ccattaagtg cgagacggac aaggagcgcc tgctgctgtg ctaccagacc aactcgcaga 4201 ttgtccaggg ccgattcccg ctatcccggg agttggcttt ggagctggcc tcgctgatgt 4261 cccagatcga catgggcgac tactcgctgg agaagtcccg cgacgtgggc gtgggcctga 4321 agggtctgga caagttctac ccgtatcgct atagggacgc tttgggcgcc gagcagctga 4381 aggatgtgca ggagctgctg gtctccaagt ggatgctgct caagggtcgc tccacgctgg 4441 actgtgtgcg catttacctc acctgctgcc gcaagtggcc gtatttcgga gcctgcctgt 4501 tccaggcgaa gcccagacag agcccagaat catccatggg caccacggga gcagccactc 4561 cggttgcctg gctggcggtg gccgaggatg ccctcaacgt actcgagctg tccaccatgg 4621 cgccggtggc caggtatcca tacagttcgg tgatgacctt tggcggctgc caggacgact 4681 ttatgctggt ggtttcccac gacgacggca gcggtgagca aaagctcctg tttgccatga 4741 gcaagcccaa gattctggag atcacgctgc tcatagcgga ctacatgaat gcactgggcc 4801 acacggtgcc aggaacgccg cagatgaact cgctgacccg caacggatcg catcgctcgc 4861 tgcgagcctc ccagcgtccg actttggggg ccggcggctc ggcggtggcc accaccaccg 4921 ggttctccac gaacgccacc accacggccc acaacacgct caattcgcat gcgacgcaca 4981 cgctcaactc gaaccactcg cacacgctga gcagctccca tcacgccggc ggcggcggag 5041 gaggaagtca gccgggcaca ctgagctcgg gtcatcatca tcctcagcac caccaccatc 5101 accagcagca gcagcagcac caccagcctg atatactaaa gagcacgccg gatcatcaga 5161 ggatcaagta gattggaact aagattccta atagatcgag aagatagtag agaagatggg 5221 aggatcattg tacatagacg gaggatcgga tcacagctta acagacatat acgactaaac 5281 agatacatat gcaccagcct agtggcaaca aatatacacc taaagataga aagatagaaa 5341 gatataaaga tagatggata gatggatagc ggtagagaga cgacgtagcg taatcggcct 5401 gggttggacc ttcttctcct tgcgcaccac tcactaaagt tctctttcct aagctaacaa 5461 cggtactcgt actctaaatc taaattgtaa acaaaaacag cagcagcagc aagcatatta 5521 tatatatatt ataaatttaa tttttttgaa tagtcctaag tccacgtacc ccaaaaaatg 5581 caagaggtat gtgaagaaga agaaacttaa acgtaaacag aacatgaatc tcaatgttta 5641 gattgttctt gttcttgtct tattattacc tattattaat attatttttt tgtatttttt 5701 ttaaccaaca aacaagcagc cacaatgcaa aacaacctat aaacacctat agaaacgata 5761 tatttgagtg ttctcgctct tcgatgcttt gtaatgaatc tcaatttgta attgtccctc 5821 catgcgcgaa actgcctttt gaatttgtag atgtcggagc caagaacgag taaaagcgaa 5881 aaacaaaaaa gaaatcaagc caaaaacaag caaactagca ttagcagaaa ccaattgaga 5941 aaacaagcaa atattttgta aaggattttt caagcccagt gcaggacgac catcaaccaa 6001 gcatccccat ctacatctag atatttacag tgaagccccg attcgtacgg ttaactgagg 6061 gtcgatttct caatgtcatg ttatggttcc ggttagttaa ctgtcagaga aaactaattt 6121 gaggttaaat ggttcggaag aactaaatcg ttttctcaat gtgatgttaa tttaacctga 6181 aattaacctg aacttaacct gacattgaga aaacggccca aatacgataa cgcgttctta 6241 gcccgttcag tgtctagatg tacaacacaa aaactcactc accagagctt cagcagaaac 6301 cttaaacaca caaatgaagg tagtcaacaa aattcggtag ataaacacgc cccaattaat 6361 tattgcccac ttttttacac ccgcgcccac agaagcatat atgcattcat atatatacat 6421 atagaatata tagaaggcag acggcagaag gtatacatgt attcggattc gatatttaac 6481 aaaattatac acaccaaatt aacgatataa caaacagttt atacggtaac agcgcatttt 6541 tttcctaatt gtaaagattt gatattacaa atttatatgc gccgagacgc aacgaaaacg 6601 aaaatggaaa ttaaacgaga aaacgagaga tcgaacagag catctcattg ggaagaatcg 6661 aagaaaatcg aaggcttgca agtggatata aactatatag gcgaatgtat cacacatcac 6721 actccagtga aacgaaatat atataaaggg aaattaacga ttaaaactaa accaaaaatg 6781 a