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LOCUS XM_017151057 6431 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X12, mRNA. ACCESSION XM_017151057 VERSION XM_017151057.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151057.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6431 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6431 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063827" CDS 154..4821 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X11" /protein_id="XP_017006546.2" /db_xref="GeneID:108063827" /translation="MDNYRKKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQ QARSNCSPSHQVGGGATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQI EAKAAKIKEWVNNKLRDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRN SLSLDVQDFAGSGSNPEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELER NLVAAVDGLTLAPLSSISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNP ALMASGGNSSTTTTTTSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESA AIQEPDIQEGTGTGTNLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQ QQTASGGFCDISVPVYATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSS TENTETSTSGSASSPSKSLKTSSSLSPAKRSGSESPKNAKARVHLQPRTTSTSHTNQQ HLQPQSFHTHTHHQHHTLPHQYQVQNHNHQLGAYTLAPSSGQITLPRPHGHALQTPTA SKAPSPLQQHMRGTVISDLSFESGLSDDYALPPDAVSESTCMDASMPSLLMRQSYVDS PSKKIESLEKMGHLAKLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQLDEA CRINRAEGASTFEIDTGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRDDQKP TVQGWVTKVKNGHPKKCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHVSDSD SEEREDAAQDQARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAGTQYE QLVQKLMETDGDPNCVLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQLFMS VAVNQPGIDYHVVLAQNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQVNKKL GKQTRQLLLCATQSLFTCDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAYSFVQ GWQLLALAVSLFVPRSSRLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKNGGRE TKPSRMEVLSILLKNPYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAHELGT RDASNGFCLFSDDPIEKDLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVIQLSY KNRLYWKHTIKCETDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSL EKSRDVGVGLKGLDKFYPYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVRIYLT CCRKWPYFGACLFQAKPRQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAPVARY PYSSVMTFGGCQDDFMLVVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALGHTVP GTPQMNSLTRNGSHRSLRASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHATHTL NSNHSHTLSSSHHAGGGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKSTPDHQ RIK" misc_feature <379..>606 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 2053..2340 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 2371..2676 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 2794..3453 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 3481..3783 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 3490..4152 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 4138..4449 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 6431 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtaagggtta gggtaaagcc aacatagcgg ttaaagtgcg agtgagagag gacgaccgaa 61 acaacgaaac aacggaactg gtagaatagc tatagtcccc tagcaaaacg aaaacgaaac 121 tcatcgaaca acgaaccaaa tcctttttta tgaatggata actataggaa gaaggtgcgt 181 gccatggagc agcggctgag tgagtggccc aagccaccgc cccagcatcc gcatccgcac 241 cagccagtgc cagccagtca tccgcaggag cagcagcagc agcagcaggc cagaagcaat 301 tgttcgccga gccatcaggt cggaggagga gccacggcag caggatcaac agtatcaggt 361 gcaccaccgc ccacccagga ggcggagaag accatcactt cgctggagat ccaggtggag 421 gaacagagac agctgcgact ccacgacgca cgacaaatcg aggccaaggc ggccaagatc 481 aaggagtggg tgaacaacaa gctacgcgat ctcgaggagc agaaccagtt gctgcgcgaa 541 cagaacgtca agtgcaacca gcagttggag ctgctcaaga atcacatagc caatcaatcg 601 cagcgccaca gtatcgtggg tccggtgcgc aatagcctca gcctagacgt tcaggacttt 661 gccggttcgg ggtccaatcc cgagcatcgc aggcgaagcg agagtctcga tccgcaggat 721 cccattattg gccgaccgct gaccagctcg tatccgcatc accagcacag gcgaaacctc 781 tcgatggagc cgcaggaatt ggaacgaaat ctggtggccg ctgtcgatgg cctaaccctt 841 gccccgctgt ccagcatctc cagcaaagct cccggatcag ctgccaggcc agatagctcc 901 gatacggata cggcccatga ttatgcggag atttacacgc catcctgcga aaagctaccc 961 gcctggatga agaacaatcc ggcattgatg gccagtggcg ggaattccag caccaccacc 1021 acaaccacca gtgaactggg cgtgccacgg cctccgacgc cgccgctgca tcgctttccc 1081 agctgggagg ccaagatcta ccaggtggcc aacgatggac tggcgggagc tggcggaggg 1141 acggcggaga gtgcggccat tcaggagcca gatattcaag agggaacggg cacgggaacg 1201 aatctctcca atggccgacg acatggtcac agtcatggat ctggaacggg aacggtaacg 1261 gcgggaactg gggatgggca cggtaccctg ggcagtacac cgggaacgcc gctgccaccg 1321 tcgaggcaac aacaaaccgc cagcggcggc ttctgtgata tatccgtgcc cgtctacgca 1381 acggtcaagg gtcgagcctc gcagatccgc tcgatgccat ttacgggcga ttcgagcgat 1441 gactccagtg atggcgagga ccatgcggtg atgctcaccc atcattcaca caactcgtcg 1501 agcaccgaga acacggagac ctcgacatcg ggcagcgctt cgagtccctc gaagagcctg 1561 aagacctcct ctagcctaag tccggccaag cgaagtggtt cggagagtcc caagaacgcg 1621 aaggcgcgtg tccacctcca accacgcacc acatccacca gccacaccaa ccaacagcat 1681 ctccaaccgc aatcgttcca tacgcatacg caccaccaac accacacact gccccaccaa 1741 taccaagtcc agaatcataa ccaccagttg ggggcctaca cgctggcgcc ttcgagtggg 1801 cagataacgc tgccgcgtcc ccatggccac gccctccaaa ctccaaccgc ctccaaagcc 1861 ccctcacccc tccagcagca catgcgtggc acagtaattt cagatctctc ctttgaatca 1921 ggcctctcgg acgactacgc cctgcccccc gacgccgtgt cggagtccac gtgcatggac 1981 gcctcgatgc cgtcgctgtt gatgcgacag tcctacgtgg attcgcccag caaaaagatt 2041 gagtcgctgg agaagatggg tcacctggcc aagctgggtg gcaagctgaa gacttggcgc 2101 aagcgttggt tcgttctaaa gaacggatcc ctcaactact ggaagagcca gcacgatgtg 2161 cagcggaagc cccaggggca gatccaactg gacgaggcct gtcgcatcaa tcgggcggag 2221 ggagcctcca ccttcgagat agacacgggc aagaaggtct actacctcac ggcggactcg 2281 catgccacca tggacgattg gatccgggtg ctgcagaatg tgcagcgaag gaatgccacc 2341 aagctgctgc tgagtcgcga tgaccagaag ccgacggtgc agggttgggt gaccaaggtg 2401 aagaacggcc atcccaagaa gtgctggtgt gtgctgttgg gcaagatgtt cctctacttc 2461 aaggctcctg ttgagacgaa tcccctgggc cagattaata tgcgcgatgc ccgagtcgag 2521 gaggtggaac acgtttctga ctcggactcc gaggagcgag aggatgccgc ccaggatcag 2581 gcccgactca cggtggccat ctatccggcg caccagggac caacctacct gatcctgtcc 2641 gggaagccag agcgggataa ttggctctat cacctaactg tcgtttcggg cggcggccca 2701 agtgctggca cccagtatga acagctcgta cagaagctca tggaaacgga tggcgatcct 2761 aactgcgtcc tgtggcgcca tcccattctg ctgcacacca aagacaccat caccgcgccg 2821 ctctcatcaa tgcacacgga aaccatgcag ccggaggcca ttaagctctt caagagcatt 2881 cagctgttca tgtcggtggc ggtcaaccag ccgggcatcg attaccacgt ggtgctcgcc 2941 cagaacgccc tgcaacatgc tctggatatg cccgagctgc agacggagat gatctgcata 3001 ctgatcaagc agacctcccg ccacatgggc cagaagctca gtgtcggcgt ccaggtaaac 3061 aagaagctgg gcaagcaaac gcgccaacta ctgttgtgcg ccacccaaag cctattcacc 3121 tgtgataccc aacaggcggg ccacgcccaa gccaacggca gttcgcccac ctccatacag 3181 gctcctgctg ccacgcccat aatcgactgc aaaagcaacc cgcccgccta cagcttcgtc 3241 cagggctggc agctcctggc cctggccgta tccctctttg ttccgcgctc gagtcgcctg 3301 ctgtggtacc tcaagctcca cttgtcccgg aatgcggata caaagacaga gacgggcaag 3361 tacgccgcct actgtgagcg cgcgctggag aggacgctta agaacggggg ccgcgagacg 3421 aaaccgtcgc ggatggaggt tctatcgatt ctcctgaaga atccctacca ccactctctg 3481 ccgcatgcga ttcccgtgca catgatgaac accacctacc aggtggtttc ctttgatggc 3541 tccaccacca tcgaggagtt ccaggccact ttggcccacg aactgggcac gcgggatgcc 3601 agcaatgggt tctgcctatt cagcgacgat ccaattgaga aggatctgga gcactacctg 3661 gagccgctgg ccaagctgtg cgacgtgatc agcaaatggg agacggcttt aagggagaag 3721 ggatcgggga agtttgagaa ttcgcgggtg atccagctga gctacaagaa ccgtctctac 3781 tggaagcaca ccattaagtg cgagacggac aaggagcgcc tgctgctgtg ctaccagacc 3841 aactcgcaga ttgtccaggg ccgattcccg ctatcccggg agttggcttt ggagctggcc 3901 tcgctgatgt cccagatcga catgggcgac tactcgctgg agaagtcccg cgacgtgggc 3961 gtgggcctga agggtctgga caagttctac ccgtatcgct atagggacgc tttgggcgcc 4021 gagcagctga aggatgtgca ggagctgctg gtctccaagt ggatgctgct caagggtcgc 4081 tccacgctgg actgtgtgcg catttacctc acctgctgcc gcaagtggcc gtatttcgga 4141 gcctgcctgt tccaggcgaa gcccagacag agcccagaat catccatggg caccacggga 4201 gcagccactc cggttgcctg gctggcggtg gccgaggatg ccctcaacgt actcgagctg 4261 tccaccatgg cgccggtggc caggtatcca tacagttcgg tgatgacctt tggcggctgc 4321 caggacgact ttatgctggt ggtttcccac gacgacggca gcggtgagca aaagctcctg 4381 tttgccatga gcaagcccaa gattctggag atcacgctgc tcatagcgga ctacatgaat 4441 gcactgggcc acacggtgcc aggaacgccg cagatgaact cgctgacccg caacggatcg 4501 catcgctcgc tgcgagcctc ccagcgtccg actttggggg ccggcggctc ggcggtggcc 4561 accaccaccg ggttctccac gaacgccacc accacggccc acaacacgct caattcgcat 4621 gcgacgcaca cgctcaactc gaaccactcg cacacgctga gcagctccca tcacgccggc 4681 ggcggcggag gaggaagtca gccgggcaca ctgagctcgg gtcatcatca tcctcagcac 4741 caccaccatc accagcagca gcagcagcac caccagcctg atatactaaa gagcacgccg 4801 gatcatcaga ggatcaagta gattggaact aagattccta atagatcgag aagatagtag 4861 agaagatggg aggatcattg tacatagacg gaggatcgga tcacagctta acagacatat 4921 acgactaaac agatacatat gcaccagcct agtggcaaca aatatacacc taaagataga 4981 aagatagaaa gatataaaga tagatggata gatggatagc ggtagagaga cgacgtagcg 5041 taatcggcct gggttggacc ttcttctcct tgcgcaccac tcactaaagt tctctttcct 5101 aagctaacaa cggtactcgt actctaaatc taaattgtaa acaaaaacag cagcagcagc 5161 aagcatatta tatatatatt ataaatttaa tttttttgaa tagtcctaag tccacgtacc 5221 ccaaaaaatg caagaggtat gtgaagaaga agaaacttaa acgtaaacag aacatgaatc 5281 tcaatgttta gattgttctt gttcttgtct tattattacc tattattaat attatttttt 5341 tgtatttttt ttaaccaaca aacaagcagc cacaatgcaa aacaacctat aaacacctat 5401 agaaacgata tatttgagtg ttctcgctct tcgatgcttt gtaatgaatc tcaatttgta 5461 attgtccctc catgcgcgaa actgcctttt gaatttgtag atgtcggagc caagaacgag 5521 taaaagcgaa aaacaaaaaa gaaatcaagc caaaaacaag caaactagca ttagcagaaa 5581 ccaattgaga aaacaagcaa atattttgta aaggattttt caagcccagt gcaggacgac 5641 catcaaccaa gcatccccat ctacatctag atatttacag tgaagccccg attcgtacgg 5701 ttaactgagg gtcgatttct caatgtcatg ttatggttcc ggttagttaa ctgtcagaga 5761 aaactaattt gaggttaaat ggttcggaag aactaaatcg ttttctcaat gtgatgttaa 5821 tttaacctga aattaacctg aacttaacct gacattgaga aaacggccca aatacgataa 5881 cgcgttctta gcccgttcag tgtctagatg tacaacacaa aaactcactc accagagctt 5941 cagcagaaac cttaaacaca caaatgaagg tagtcaacaa aattcggtag ataaacacgc 6001 cccaattaat tattgcccac ttttttacac ccgcgcccac agaagcatat atgcattcat 6061 atatatacat atagaatata tagaaggcag acggcagaag gtatacatgt attcggattc 6121 gatatttaac aaaattatac acaccaaatt aacgatataa caaacagttt atacggtaac 6181 agcgcatttt tttcctaatt gtaaagattt gatattacaa atttatatgc gccgagacgc 6241 aacgaaaacg aaaatggaaa ttaaacgaga aaacgagaga tcgaacagag catctcattg 6301 ggaagaatcg aagaaaatcg aaggcttgca agtggatata aactatatag gcgaatgtat 6361 cacacatcac actccagtga aacgaaatat atataaaggg aaattaacga ttaaaactaa 6421 accaaaaatg a