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LOCUS XM_017151055 6790 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X10, mRNA. ACCESSION XM_017151055 VERSION XM_017151055.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151055.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6790 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6790 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063827" CDS 42..5180 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X9" /protein_id="XP_017006544.2" /db_xref="GeneID:108063827" /translation="MQWTSDHQPSTVKKKTKDSYSSAKEQRTLAENLAEEEPMDGNTG SSSASKLPLLQKEVEGSGCSSMMTLSDGGGTTMEVTVSTTTTTTIIESSSSTSCTLVE NNASGSSASPSPASPAAYMQHHHGSPLHHHLQLHHHTAPPSPLAAVRSAVANGGSPAA AACCSPGGSHHHLLAHQQQQHHHPLPHHPSLYPLMAGYAGGGSSGPSSLVNSPALGRR KRYTSNSSNCSSQFNNNYAGLDVDSLDDMLRKLTELEQRVIEAEERAEEAEDKVRAME QRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGGATAAGSTVSGA PPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKLRDLEEQNQLLR EQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSNPEHRRRSESLD PQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLSSISSKAPGSAA RPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTTTSELGVPRPPT PPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGTNLSNGRRHGHS HGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPVYATVKGRASQI RSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSPSKSLKTSSSLS PAKRSGSESPKNAKARGLSDDYALPPDAVSESTCMDASMPSLLMRQSYVDSPSKKIES LEKMGHLAKLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQLDEACRINRAE GASTFEIDTGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRDDQKPTVQGWVT KVKNGHPKKCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHVSDSDSEEREDA AQDQARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAGTQYEQLVQKLM ETDGDPNCVLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQLFMSVAVNQPG IDYHVVLAQNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQQLLLCATQSLFT CDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAYSFVQGWQLLALAVSLFVPRSS RLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKNGGRETKPSRMEVLSILLKNPY HHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAHELGTRDASNGFCLFSDDPIEK DLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVIQLSYKNRLYWKHTIKCETDKE RLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSRDVGVGLKGLDKFY PYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVRIYLTCCRKWPYFGACLFQAKP RQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAPVARYPYSSVMTFGGCQDDFML VVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALGHTVPGTPQMNSLTRNGSHRSL RASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHATHTLNSNHSHTLSSSHHAGGG GGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKSTPDHQRIK" misc_feature 1056..>1259 /gene="LOC108063827" /note="Trichohyalin-plectin-homology domain; Region: TPH; pfam13868" /db_xref="CDD:464007" misc_feature 2442..2729 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 2760..3065 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 3183..3812 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 3840..4142 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 3849..4511 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 4497..4808 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 6790 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gattttcgag tgtttaatgt gcattatttg cgccacaaat tatgcaatgg acgagtgacc 61 accagccgtc gacggtgaag aagaagacga aggactctta ctcctccgcg aaggaacaac 121 gaactctggc cgaaaatctg gctgaagagg agccaatgga tgggaacacg ggatcatcat 181 ccgcttctaa acttccactt ttgcaaaaag aagtcgaagg cagtggctgc tcctctatga 241 tgactctatc tgatggtggt ggcaccacca tggaggtcac cgtcagcaca accaccacaa 301 ccaccataat cgaatcctcc agttccacga gctgcactct ggtggagaac aacgctagtg 361 gatcttcggc ttcaccatca ccagcatcgc cggccgccta catgcagcac caccatggct 421 caccgctgca ccaccacctg cagttgcacc accacaccgc accaccatcg cctttggcag 481 cggtgcgaag tgcggtggcg aatggaggaa gtccggcggc ggcggcctgt tgttcccccg 541 gcggctcaca tcatcatctt ttggcccatc agcagcagca gcaccaccac ccgctgcccc 601 accacccatc gctctacccc ctgatggccg gctatgccgg tggtggctcc agcggaccca 661 gttcgctggt caactcgccc gcattgggca ggcgaaagcg gtacaccagc aactcctcca 721 actgttccag tcagttcaac aacaactatg ccggattgga tgtggactcg ttggacgata 781 tgttgagaaa gctaacggag ctggaacaac gcgtcattga agcggaagaa cgcgccgagg 841 aagccgaaga taaggtgcgt gccatggagc agcggctgag tgagtggccc aagccaccgc 901 cccagcatcc gcatccgcac cagccagtgc cagccagtca tccgcaggag cagcagcagc 961 agcagcaggc cagaagcaat tgttcgccga gccatcaggt cggaggagga gccacggcag 1021 caggatcaac agtatcaggt gcaccaccgc ccacccagga ggcggagaag accatcactt 1081 cgctggagat ccaggtggag gaacagagac agctgcgact ccacgacgca cgacaaatcg 1141 aggccaaggc ggccaagatc aaggagtggg tgaacaacaa gctacgcgat ctcgaggagc 1201 agaaccagtt gctgcgcgaa cagaacgtca agtgcaacca gcagttggag ctgctcaaga 1261 atcacatagc caatcaatcg cagcgccaca gtatcgtggg tccggtgcgc aatagcctca 1321 gcctagacgt tcaggacttt gccggttcgg ggtccaatcc cgagcatcgc aggcgaagcg 1381 agagtctcga tccgcaggat cccattattg gccgaccgct gaccagctcg tatccgcatc 1441 accagcacag gcgaaacctc tcgatggagc cgcaggaatt ggaacgaaat ctggtggccg 1501 ctgtcgatgg cctaaccctt gccccgctgt ccagcatctc cagcaaagct cccggatcag 1561 ctgccaggcc agatagctcc gatacggata cggcccatga ttatgcggag atttacacgc 1621 catcctgcga aaagctaccc gcctggatga agaacaatcc ggcattgatg gccagtggcg 1681 ggaattccag caccaccacc acaaccacca gtgaactggg cgtgccacgg cctccgacgc 1741 cgccgctgca tcgctttccc agctgggagg ccaagatcta ccaggtggcc aacgatggac 1801 tggcgggagc tggcggaggg acggcggaga gtgcggccat tcaggagcca gatattcaag 1861 agggaacggg cacgggaacg aatctctcca atggccgacg acatggtcac agtcatggat 1921 ctggaacggg aacggtaacg gcgggaactg gggatgggca cggtaccctg ggcagtacac 1981 cgggaacgcc gctgccaccg tcgaggcaac aacaaaccgc cagcggcggc ttctgtgata 2041 tatccgtgcc cgtctacgca acggtcaagg gtcgagcctc gcagatccgc tcgatgccat 2101 ttacgggcga ttcgagcgat gactccagtg atggcgagga ccatgcggtg atgctcaccc 2161 atcattcaca caactcgtcg agcaccgaga acacggagac ctcgacatcg ggcagcgctt 2221 cgagtccctc gaagagcctg aagacctcct ctagcctaag tccggccaag cgaagtggtt 2281 cggagagtcc caagaacgcg aaggcgcgtg gcctctcgga cgactacgcc ctgccccccg 2341 acgccgtgtc ggagtccacg tgcatggacg cctcgatgcc gtcgctgttg atgcgacagt 2401 cctacgtgga ttcgcccagc aaaaagattg agtcgctgga gaagatgggt cacctggcca 2461 agctgggtgg caagctgaag acttggcgca agcgttggtt cgttctaaag aacggatccc 2521 tcaactactg gaagagccag cacgatgtgc agcggaagcc ccaggggcag atccaactgg 2581 acgaggcctg tcgcatcaat cgggcggagg gagcctccac cttcgagata gacacgggca 2641 agaaggtcta ctacctcacg gcggactcgc atgccaccat ggacgattgg atccgggtgc 2701 tgcagaatgt gcagcgaagg aatgccacca agctgctgct gagtcgcgat gaccagaagc 2761 cgacggtgca gggttgggtg accaaggtga agaacggcca tcccaagaag tgctggtgtg 2821 tgctgttggg caagatgttc ctctacttca aggctcctgt tgagacgaat cccctgggcc 2881 agattaatat gcgcgatgcc cgagtcgagg aggtggaaca cgtttctgac tcggactccg 2941 aggagcgaga ggatgccgcc caggatcagg cccgactcac ggtggccatc tatccggcgc 3001 accagggacc aacctacctg atcctgtccg ggaagccaga gcgggataat tggctctatc 3061 acctaactgt cgtttcgggc ggcggcccaa gtgctggcac ccagtatgaa cagctcgtac 3121 agaagctcat ggaaacggat ggcgatccta actgcgtcct gtggcgccat cccattctgc 3181 tgcacaccaa agacaccatc accgcgccgc tctcatcaat gcacacggaa accatgcagc 3241 cggaggccat taagctcttc aagagcattc agctgttcat gtcggtggcg gtcaaccagc 3301 cgggcatcga ttaccacgtg gtgctcgccc agaacgccct gcaacatgct ctggatatgc 3361 ccgagctgca gacggagatg atctgcatac tgatcaagca gacctcccgc cacatgggcc 3421 agaagctcag tgtcggcgtc cagcaactac tgttgtgcgc cacccaaagc ctattcacct 3481 gtgataccca acaggcgggc cacgcccaag ccaacggcag ttcgcccacc tccatacagg 3541 ctcctgctgc cacgcccata atcgactgca aaagcaaccc gcccgcctac agcttcgtcc 3601 agggctggca gctcctggcc ctggccgtat ccctctttgt tccgcgctcg agtcgcctgc 3661 tgtggtacct caagctccac ttgtcccgga atgcggatac aaagacagag acgggcaagt 3721 acgccgccta ctgtgagcgc gcgctggaga ggacgcttaa gaacgggggc cgcgagacga 3781 aaccgtcgcg gatggaggtt ctatcgattc tcctgaagaa tccctaccac cactctctgc 3841 cgcatgcgat tcccgtgcac atgatgaaca ccacctacca ggtggtttcc tttgatggct 3901 ccaccaccat cgaggagttc caggccactt tggcccacga actgggcacg cgggatgcca 3961 gcaatgggtt ctgcctattc agcgacgatc caattgagaa ggatctggag cactacctgg 4021 agccgctggc caagctgtgc gacgtgatca gcaaatggga gacggcttta agggagaagg 4081 gatcggggaa gtttgagaat tcgcgggtga tccagctgag ctacaagaac cgtctctact 4141 ggaagcacac cattaagtgc gagacggaca aggagcgcct gctgctgtgc taccagacca 4201 actcgcagat tgtccagggc cgattcccgc tatcccggga gttggctttg gagctggcct 4261 cgctgatgtc ccagatcgac atgggcgact actcgctgga gaagtcccgc gacgtgggcg 4321 tgggcctgaa gggtctggac aagttctacc cgtatcgcta tagggacgct ttgggcgccg 4381 agcagctgaa ggatgtgcag gagctgctgg tctccaagtg gatgctgctc aagggtcgct 4441 ccacgctgga ctgtgtgcgc atttacctca cctgctgccg caagtggccg tatttcggag 4501 cctgcctgtt ccaggcgaag cccagacaga gcccagaatc atccatgggc accacgggag 4561 cagccactcc ggttgcctgg ctggcggtgg ccgaggatgc cctcaacgta ctcgagctgt 4621 ccaccatggc gccggtggcc aggtatccat acagttcggt gatgaccttt ggcggctgcc 4681 aggacgactt tatgctggtg gtttcccacg acgacggcag cggtgagcaa aagctcctgt 4741 ttgccatgag caagcccaag attctggaga tcacgctgct catagcggac tacatgaatg 4801 cactgggcca cacggtgcca ggaacgccgc agatgaactc gctgacccgc aacggatcgc 4861 atcgctcgct gcgagcctcc cagcgtccga ctttgggggc cggcggctcg gcggtggcca 4921 ccaccaccgg gttctccacg aacgccacca ccacggccca caacacgctc aattcgcatg 4981 cgacgcacac gctcaactcg aaccactcgc acacgctgag cagctcccat cacgccggcg 5041 gcggcggagg aggaagtcag ccgggcacac tgagctcggg tcatcatcat cctcagcacc 5101 accaccatca ccagcagcag cagcagcacc accagcctga tatactaaag agcacgccgg 5161 atcatcagag gatcaagtag attggaacta agattcctaa tagatcgaga agatagtaga 5221 gaagatggga ggatcattgt acatagacgg aggatcggat cacagcttaa cagacatata 5281 cgactaaaca gatacatatg caccagccta gtggcaacaa atatacacct aaagatagaa 5341 agatagaaag atataaagat agatggatag atggatagcg gtagagagac gacgtagcgt 5401 aatcggcctg ggttggacct tcttctcctt gcgcaccact cactaaagtt ctctttccta 5461 agctaacaac ggtactcgta ctctaaatct aaattgtaaa caaaaacagc agcagcagca 5521 agcatattat atatatatta taaatttaat ttttttgaat agtcctaagt ccacgtaccc 5581 caaaaaatgc aagaggtatg tgaagaagaa gaaacttaaa cgtaaacaga acatgaatct 5641 caatgtttag attgttcttg ttcttgtctt attattacct attattaata ttattttttt 5701 gtattttttt taaccaacaa acaagcagcc acaatgcaaa acaacctata aacacctata 5761 gaaacgatat atttgagtgt tctcgctctt cgatgctttg taatgaatct caatttgtaa 5821 ttgtccctcc atgcgcgaaa ctgccttttg aatttgtaga tgtcggagcc aagaacgagt 5881 aaaagcgaaa aacaaaaaag aaatcaagcc aaaaacaagc aaactagcat tagcagaaac 5941 caattgagaa aacaagcaaa tattttgtaa aggatttttc aagcccagtg caggacgacc 6001 atcaaccaag catccccatc tacatctaga tatttacagt gaagccccga ttcgtacggt 6061 taactgaggg tcgatttctc aatgtcatgt tatggttccg gttagttaac tgtcagagaa 6121 aactaatttg aggttaaatg gttcggaaga actaaatcgt tttctcaatg tgatgttaat 6181 ttaacctgaa attaacctga acttaacctg acattgagaa aacggcccaa atacgataac 6241 gcgttcttag cccgttcagt gtctagatgt acaacacaaa aactcactca ccagagcttc 6301 agcagaaacc ttaaacacac aaatgaaggt agtcaacaaa attcggtaga taaacacgcc 6361 ccaattaatt attgcccact tttttacacc cgcgcccaca gaagcatata tgcattcata 6421 tatatacata tagaatatat agaaggcaga cggcagaagg tatacatgta ttcggattcg 6481 atatttaaca aaattataca caccaaatta acgatataac aaacagttta tacggtaaca 6541 gcgcattttt ttcctaattg taaagatttg atattacaaa tttatatgcg ccgagacgca 6601 acgaaaacga aaatggaaat taaacgagaa aacgagagat cgaacagagc atctcattgg 6661 gaagaatcga agaaaatcga aggcttgcaa gtggatataa actatatagg cgaatgtatc 6721 acacatcaca ctccagtgaa acgaaatata tataaaggga aattaacgat taaaactaaa 6781 ccaaaaatga