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LOCUS XM_017151054 7428 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X9, mRNA. ACCESSION XM_017151054 VERSION XM_017151054.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151054.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7428 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7428 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063827" CDS 539..5818 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X8" /protein_id="XP_017006543.2" /db_xref="GeneID:108063827" /translation="MSDEVPLGRLSQIFDTLTNLQQQQQQHLRSQEQLHPPHPHSHPH THPQSPADQRRRSASSSPSPSASVSASTSGRATPSLGVASPLNTLQYYSHNAHNNYLL RPQDVATSGYLHTFPSHLYHHQQHHHQVHHLQQHSQPPSLPTQLGGGVTQRGCLSGSQ SLQGSPLLAKRATSFSGQIPMAQGRFGATGGGTGVTASTPNSPRLLPRRVPRPPPIPA KPNQVKTAAAASDQQQPRDSSSTAPTIVQSHVNPVLAALDAPDAPWPHFSTLTEHLDV HQVNNYGQALPEINWQERCLELQLELHRSKNQAGRIRDMLREKLTELEQRVIEAEERA EEAEDKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGG ATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKL RDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSN PEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLS SISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTT TSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGT NLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPV YATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSP SKSLKTSSSLSPAKRSGSESPKNAKARGLSDDYALPPDAVSESTCMDASMPSLLMRQS YVDSPSKKIESLEKMGHLAKLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQ LDEACRINRAEGASTFEIDTGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRD DQKPTVQGWVTKVKNGHPKKCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHV SDSDSEEREDAAQDQARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAG TQYEQLVQKLMETDGDPNCVLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQ LFMSVAVNQPGIDYHVVLAQNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQV NKKLGKQTRAPAATPIIDCKSNPPAYSFVQGWQLLALAVSLFVPRSSRLLWYLKLHLS RNADTKTETGKYAAYCERALERTLKNGGRETKPSRMEVLSILLKNPYHHSLPHAIPVH MMNTTYQVVSFDGSTTIEEFQATLAHELGTRDASNGFCLFSDDPIEKDLEHYLEPLAK LCDVISKWETALREKGSGKFENSRVIQLSYKNRLYWKHTIKCETDKERLLLCYQTNSQ IVQGRFPLSRELALELASLMSQIDMGDYSLEKSRDVGVGLKGLDKFYPYRYRDALGAE QLKDVQELLVSKWMLLKGRSTLDCVRIYLTCCRKWPYFGACLFQAKPRQSPESSMGTT GAATPVAWLAVAEDALNVLELSTMAPVARYPYSSVMTFGGCQDDFMLVVSHDDGSGEQ KLLFAMSKPKILEITLLIADYMNALGHTVPGTPQMNSLTRNGSHRSLRASQRPTLGAG GSAVATTTGFSTNATTTAHNTLNSHATHTLNSNHSHTLSSSHHAGGGGGGSQPGTLSS GHHHPQHHHHHQQQQQHHQPDILKSTPDHQRIK" misc_feature <1763..>1990 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3146..3433 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 3464..3769 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 3887..4450 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 4478..4780 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 4487..5149 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 5135..5446 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 7428 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtgtgtctg cggcagtgcg tgtgtttgcc aggccaaaac gaaaagcgag gaaccaaagc 61 caaagaaagc taagcctatc ccaacaacaa caagtgcgcg aaagcagcca gaaggcaaaa 121 caacaataaa gcagcgtgga aacagctgtt cgtttccttt tttctcggcc cgaaaatgca 181 aaattaatac aattacaatg cggcggcgat aaaacaaaaa taaaaacaag cagagagcgg 241 agagaaaaaa acaaaaagta aaaagcattt accgtttaaa cagcaagaac aacaacaacg 301 acaacaaagc caagaaggag aggcacaaag aggaagaaga agagtttgcg cagtcacgtg 361 tgcagtcgac gtcgacggcg gccgcggcag aggaaaattc ccatgcggaa aattcacatt 421 cgcgatgatg atggaaagcg agacgatgat gatgaagctg ttgaaggagg gaaaaccagc 481 agcagcggca gcaacaacaa caactagcag ctgttagagc gagacagcta ccgcgtcaat 541 gtccgacgaa gtgcctttgg gtcgcctatc gcagatcttc gatacgctaa ccaatcttca 601 gcagcaacag cagcagcacc tgcgttccca ggagcaactg catcctccac atccgcattc 661 acatccgcat acacatccgc agtcgcctgc ggatcagcgt aggagatccg cctcctcatc 721 gccatcgcca tcggccagtg tctctgcctc gacttctggg cgggccacgc cttctttggg 781 cgtggccagc ccactgaata cactgcaata ctacagtcat aacgcccata ataactattt 841 gctgcggccg caagatgtcg ccaccagtgg ctacctgcac acctttcctt cgcatttgta 901 tcatcatcag cagcatcatc accaagtgca ccacctgcag cagcacagcc aaccgccctc 961 actgcccacc caattgggag gcggggtaac ccaacgtggc tgtctatcgg gctcacaatc 1021 gctgcaggga tcaccacttt tggccaagag ggcaacctcc tttagtgggc aaataccaat 1081 ggctcagggt cgattcggag ccaccggagg aggaactgga gtcactgcat ccacaccgaa 1141 tagcccgagg cttctgcctc gacgtgtgcc acgcccaccg cccattccgg ccaagccgaa 1201 tcaggtgaag acggcggcgg cagcgtcgga tcaacaacag cccagggatt cttcttcgac 1261 tgccccgacg attgttcagt cgcatgtgaa tcccgtgctg gctgctctcg atgcaccaga 1321 tgctccatgg ccacactttt cgacgctcac cgagcacttg gacgtccacc aggtgaacaa 1381 ctacggacag gctctgccgg agattaactg gcaggaacga tgtttggagc tgcaactgga 1441 gctgcatcgg tcgaagaatc aggcgggtcg tatacgcgat atgctgcgtg aaaagctaac 1501 ggagctggaa caacgcgtca ttgaagcgga agaacgcgcc gaggaagccg aagataaggt 1561 gcgtgccatg gagcagcggc tgagtgagtg gcccaagcca ccgccccagc atccgcatcc 1621 gcaccagcca gtgccagcca gtcatccgca ggagcagcag cagcagcagc aggccagaag 1681 caattgttcg ccgagccatc aggtcggagg aggagccacg gcagcaggat caacagtatc 1741 aggtgcacca ccgcccaccc aggaggcgga gaagaccatc acttcgctgg agatccaggt 1801 ggaggaacag agacagctgc gactccacga cgcacgacaa atcgaggcca aggcggccaa 1861 gatcaaggag tgggtgaaca acaagctacg cgatctcgag gagcagaacc agttgctgcg 1921 cgaacagaac gtcaagtgca accagcagtt ggagctgctc aagaatcaca tagccaatca 1981 atcgcagcgc cacagtatcg tgggtccggt gcgcaatagc ctcagcctag acgttcagga 2041 ctttgccggt tcggggtcca atcccgagca tcgcaggcga agcgagagtc tcgatccgca 2101 ggatcccatt attggccgac cgctgaccag ctcgtatccg catcaccagc acaggcgaaa 2161 cctctcgatg gagccgcagg aattggaacg aaatctggtg gccgctgtcg atggcctaac 2221 ccttgccccg ctgtccagca tctccagcaa agctcccgga tcagctgcca ggccagatag 2281 ctccgatacg gatacggccc atgattatgc ggagatttac acgccatcct gcgaaaagct 2341 acccgcctgg atgaagaaca atccggcatt gatggccagt ggcgggaatt ccagcaccac 2401 caccacaacc accagtgaac tgggcgtgcc acggcctccg acgccgccgc tgcatcgctt 2461 tcccagctgg gaggccaaga tctaccaggt ggccaacgat ggactggcgg gagctggcgg 2521 agggacggcg gagagtgcgg ccattcagga gccagatatt caagagggaa cgggcacggg 2581 aacgaatctc tccaatggcc gacgacatgg tcacagtcat ggatctggaa cgggaacggt 2641 aacggcggga actggggatg ggcacggtac cctgggcagt acaccgggaa cgccgctgcc 2701 accgtcgagg caacaacaaa ccgccagcgg cggcttctgt gatatatccg tgcccgtcta 2761 cgcaacggtc aagggtcgag cctcgcagat ccgctcgatg ccatttacgg gcgattcgag 2821 cgatgactcc agtgatggcg aggaccatgc ggtgatgctc acccatcatt cacacaactc 2881 gtcgagcacc gagaacacgg agacctcgac atcgggcagc gcttcgagtc cctcgaagag 2941 cctgaagacc tcctctagcc taagtccggc caagcgaagt ggttcggaga gtcccaagaa 3001 cgcgaaggcg cgtggcctct cggacgacta cgccctgccc cccgacgccg tgtcggagtc 3061 cacgtgcatg gacgcctcga tgccgtcgct gttgatgcga cagtcctacg tggattcgcc 3121 cagcaaaaag attgagtcgc tggagaagat gggtcacctg gccaagctgg gtggcaagct 3181 gaagacttgg cgcaagcgtt ggttcgttct aaagaacgga tccctcaact actggaagag 3241 ccagcacgat gtgcagcgga agccccaggg gcagatccaa ctggacgagg cctgtcgcat 3301 caatcgggcg gagggagcct ccaccttcga gatagacacg ggcaagaagg tctactacct 3361 cacggcggac tcgcatgcca ccatggacga ttggatccgg gtgctgcaga atgtgcagcg 3421 aaggaatgcc accaagctgc tgctgagtcg cgatgaccag aagccgacgg tgcagggttg 3481 ggtgaccaag gtgaagaacg gccatcccaa gaagtgctgg tgtgtgctgt tgggcaagat 3541 gttcctctac ttcaaggctc ctgttgagac gaatcccctg ggccagatta atatgcgcga 3601 tgcccgagtc gaggaggtgg aacacgtttc tgactcggac tccgaggagc gagaggatgc 3661 cgcccaggat caggcccgac tcacggtggc catctatccg gcgcaccagg gaccaaccta 3721 cctgatcctg tccgggaagc cagagcggga taattggctc tatcacctaa ctgtcgtttc 3781 gggcggcggc ccaagtgctg gcacccagta tgaacagctc gtacagaagc tcatggaaac 3841 ggatggcgat cctaactgcg tcctgtggcg ccatcccatt ctgctgcaca ccaaagacac 3901 catcaccgcg ccgctctcat caatgcacac ggaaaccatg cagccggagg ccattaagct 3961 cttcaagagc attcagctgt tcatgtcggt ggcggtcaac cagccgggca tcgattacca 4021 cgtggtgctc gcccagaacg ccctgcaaca tgctctggat atgcccgagc tgcagacgga 4081 gatgatctgc atactgatca agcagacctc ccgccacatg ggccagaagc tcagtgtcgg 4141 cgtccaggta aacaagaagc tgggcaagca aacgcgcgct cctgctgcca cgcccataat 4201 cgactgcaaa agcaacccgc ccgcctacag cttcgtccag ggctggcagc tcctggccct 4261 ggccgtatcc ctctttgttc cgcgctcgag tcgcctgctg tggtacctca agctccactt 4321 gtcccggaat gcggatacaa agacagagac gggcaagtac gccgcctact gtgagcgcgc 4381 gctggagagg acgcttaaga acgggggccg cgagacgaaa ccgtcgcgga tggaggttct 4441 atcgattctc ctgaagaatc cctaccacca ctctctgccg catgcgattc ccgtgcacat 4501 gatgaacacc acctaccagg tggtttcctt tgatggctcc accaccatcg aggagttcca 4561 ggccactttg gcccacgaac tgggcacgcg ggatgccagc aatgggttct gcctattcag 4621 cgacgatcca attgagaagg atctggagca ctacctggag ccgctggcca agctgtgcga 4681 cgtgatcagc aaatgggaga cggctttaag ggagaaggga tcggggaagt ttgagaattc 4741 gcgggtgatc cagctgagct acaagaaccg tctctactgg aagcacacca ttaagtgcga 4801 gacggacaag gagcgcctgc tgctgtgcta ccagaccaac tcgcagattg tccagggccg 4861 attcccgcta tcccgggagt tggctttgga gctggcctcg ctgatgtccc agatcgacat 4921 gggcgactac tcgctggaga agtcccgcga cgtgggcgtg ggcctgaagg gtctggacaa 4981 gttctacccg tatcgctata gggacgcttt gggcgccgag cagctgaagg atgtgcagga 5041 gctgctggtc tccaagtgga tgctgctcaa gggtcgctcc acgctggact gtgtgcgcat 5101 ttacctcacc tgctgccgca agtggccgta tttcggagcc tgcctgttcc aggcgaagcc 5161 cagacagagc ccagaatcat ccatgggcac cacgggagca gccactccgg ttgcctggct 5221 ggcggtggcc gaggatgccc tcaacgtact cgagctgtcc accatggcgc cggtggccag 5281 gtatccatac agttcggtga tgacctttgg cggctgccag gacgacttta tgctggtggt 5341 ttcccacgac gacggcagcg gtgagcaaaa gctcctgttt gccatgagca agcccaagat 5401 tctggagatc acgctgctca tagcggacta catgaatgca ctgggccaca cggtgccagg 5461 aacgccgcag atgaactcgc tgacccgcaa cggatcgcat cgctcgctgc gagcctccca 5521 gcgtccgact ttgggggccg gcggctcggc ggtggccacc accaccgggt tctccacgaa 5581 cgccaccacc acggcccaca acacgctcaa ttcgcatgcg acgcacacgc tcaactcgaa 5641 ccactcgcac acgctgagca gctcccatca cgccggcggc ggcggaggag gaagtcagcc 5701 gggcacactg agctcgggtc atcatcatcc tcagcaccac caccatcacc agcagcagca 5761 gcagcaccac cagcctgata tactaaagag cacgccggat catcagagga tcaagtagat 5821 tggaactaag attcctaata gatcgagaag atagtagaga agatgggagg atcattgtac 5881 atagacggag gatcggatca cagcttaaca gacatatacg actaaacaga tacatatgca 5941 ccagcctagt ggcaacaaat atacacctaa agatagaaag atagaaagat ataaagatag 6001 atggatagat ggatagcggt agagagacga cgtagcgtaa tcggcctggg ttggaccttc 6061 ttctccttgc gcaccactca ctaaagttct ctttcctaag ctaacaacgg tactcgtact 6121 ctaaatctaa attgtaaaca aaaacagcag cagcagcaag catattatat atatattata 6181 aatttaattt ttttgaatag tcctaagtcc acgtacccca aaaaatgcaa gaggtatgtg 6241 aagaagaaga aacttaaacg taaacagaac atgaatctca atgtttagat tgttcttgtt 6301 cttgtcttat tattacctat tattaatatt atttttttgt atttttttta accaacaaac 6361 aagcagccac aatgcaaaac aacctataaa cacctataga aacgatatat ttgagtgttc 6421 tcgctcttcg atgctttgta atgaatctca atttgtaatt gtccctccat gcgcgaaact 6481 gccttttgaa tttgtagatg tcggagccaa gaacgagtaa aagcgaaaaa caaaaaagaa 6541 atcaagccaa aaacaagcaa actagcatta gcagaaacca attgagaaaa caagcaaata 6601 ttttgtaaag gatttttcaa gcccagtgca ggacgaccat caaccaagca tccccatcta 6661 catctagata tttacagtga agccccgatt cgtacggtta actgagggtc gatttctcaa 6721 tgtcatgtta tggttccggt tagttaactg tcagagaaaa ctaatttgag gttaaatggt 6781 tcggaagaac taaatcgttt tctcaatgtg atgttaattt aacctgaaat taacctgaac 6841 ttaacctgac attgagaaaa cggcccaaat acgataacgc gttcttagcc cgttcagtgt 6901 ctagatgtac aacacaaaaa ctcactcacc agagcttcag cagaaacctt aaacacacaa 6961 atgaaggtag tcaacaaaat tcggtagata aacacgcccc aattaattat tgcccacttt 7021 tttacacccg cgcccacaga agcatatatg cattcatata tatacatata gaatatatag 7081 aaggcagacg gcagaaggta tacatgtatt cggattcgat atttaacaaa attatacaca 7141 ccaaattaac gatataacaa acagtttata cggtaacagc gcattttttt cctaattgta 7201 aagatttgat attacaaatt tatatgcgcc gagacgcaac gaaaacgaaa atggaaatta 7261 aacgagaaaa cgagagatcg aacagagcat ctcattggga agaatcgaag aaaatcgaag 7321 gcttgcaagt ggatataaac tatataggcg aatgtatcac acatcacact ccagtgaaac 7381 gaaatatata taaagggaaa ttaacgatta aaactaaacc aaaaatga