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LOCUS XM_017151053 7494 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X8, mRNA. ACCESSION XM_017151053 VERSION XM_017151053.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151053.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7494 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7494 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063827" CDS 539..5884 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X7" /protein_id="XP_017006542.2" /db_xref="GeneID:108063827" /translation="MSDEVPLGRLSQIFDTLTNLQQQQQQHLRSQEQLHPPHPHSHPH THPQSPADQRRRSASSSPSPSASVSASTSGRATPSLGVASPLNTLQYYSHNAHNNYLL RPQDVATSGYLHTFPSHLYHHQQHHHQVHHLQQHSQPPSLPTQLGGGVTQRGCLSGSQ SLQGSPLLAKRATSFSGQIPMAQGRFGATGGGTGVTASTPNSPRLLPRRVPRPPPIPA KPNQVKTAAAASDQQQPRDSSSTAPTIVQSHVNPVLAALDAPDAPWPHFSTLTEHLDV HQVNNYGQALPEINWQERCLELQLELHRSKNQAGRIRDMLREKLTELEQRVIEAEERA EEAEDKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGG ATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKL RDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSN PEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLS SISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTT TSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGT NLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPV YATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSP SKSLKTSSSLSPAKRSGSESPKNAKARGLSDDYALPPDAVSESTCMDASMPSLLMRQS YVDSPSKKIESLEKMGHLAKLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQ LDEACRINRAEGASTFEIDTGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRD DQKPTVQGWVTKVKNGHPKKCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHV SDSDSEEREDAAQDQARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAG TQYEQLVQKLMETDGDPNCVLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQ LFMSVAVNQPGIDYHVVLAQNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQQ LLLCATQSLFTCDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAYSFVQGWQLLA LAVSLFVPRSSRLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKNGGRETKPSRM EVLSILLKNPYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAHELGTRDASNG FCLFSDDPIEKDLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVIQLSYKNRLYW KHTIKCETDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSRDV GVGLKGLDKFYPYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVRIYLTCCRKWP YFGACLFQAKPRQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAPVARYPYSSVM TFGGCQDDFMLVVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALGHTVPGTPQMN SLTRNGSHRSLRASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHATHTLNSNHSH TLSSSHHAGGGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKSTPDHQRIK" misc_feature <1763..>1990 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3146..3433 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 3464..3769 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 3887..4516 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 4544..4846 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 4553..5215 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 5201..5512 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 7494 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtgtgtctg cggcagtgcg tgtgtttgcc aggccaaaac gaaaagcgag gaaccaaagc 61 caaagaaagc taagcctatc ccaacaacaa caagtgcgcg aaagcagcca gaaggcaaaa 121 caacaataaa gcagcgtgga aacagctgtt cgtttccttt tttctcggcc cgaaaatgca 181 aaattaatac aattacaatg cggcggcgat aaaacaaaaa taaaaacaag cagagagcgg 241 agagaaaaaa acaaaaagta aaaagcattt accgtttaaa cagcaagaac aacaacaacg 301 acaacaaagc caagaaggag aggcacaaag aggaagaaga agagtttgcg cagtcacgtg 361 tgcagtcgac gtcgacggcg gccgcggcag aggaaaattc ccatgcggaa aattcacatt 421 cgcgatgatg atggaaagcg agacgatgat gatgaagctg ttgaaggagg gaaaaccagc 481 agcagcggca gcaacaacaa caactagcag ctgttagagc gagacagcta ccgcgtcaat 541 gtccgacgaa gtgcctttgg gtcgcctatc gcagatcttc gatacgctaa ccaatcttca 601 gcagcaacag cagcagcacc tgcgttccca ggagcaactg catcctccac atccgcattc 661 acatccgcat acacatccgc agtcgcctgc ggatcagcgt aggagatccg cctcctcatc 721 gccatcgcca tcggccagtg tctctgcctc gacttctggg cgggccacgc cttctttggg 781 cgtggccagc ccactgaata cactgcaata ctacagtcat aacgcccata ataactattt 841 gctgcggccg caagatgtcg ccaccagtgg ctacctgcac acctttcctt cgcatttgta 901 tcatcatcag cagcatcatc accaagtgca ccacctgcag cagcacagcc aaccgccctc 961 actgcccacc caattgggag gcggggtaac ccaacgtggc tgtctatcgg gctcacaatc 1021 gctgcaggga tcaccacttt tggccaagag ggcaacctcc tttagtgggc aaataccaat 1081 ggctcagggt cgattcggag ccaccggagg aggaactgga gtcactgcat ccacaccgaa 1141 tagcccgagg cttctgcctc gacgtgtgcc acgcccaccg cccattccgg ccaagccgaa 1201 tcaggtgaag acggcggcgg cagcgtcgga tcaacaacag cccagggatt cttcttcgac 1261 tgccccgacg attgttcagt cgcatgtgaa tcccgtgctg gctgctctcg atgcaccaga 1321 tgctccatgg ccacactttt cgacgctcac cgagcacttg gacgtccacc aggtgaacaa 1381 ctacggacag gctctgccgg agattaactg gcaggaacga tgtttggagc tgcaactgga 1441 gctgcatcgg tcgaagaatc aggcgggtcg tatacgcgat atgctgcgtg aaaagctaac 1501 ggagctggaa caacgcgtca ttgaagcgga agaacgcgcc gaggaagccg aagataaggt 1561 gcgtgccatg gagcagcggc tgagtgagtg gcccaagcca ccgccccagc atccgcatcc 1621 gcaccagcca gtgccagcca gtcatccgca ggagcagcag cagcagcagc aggccagaag 1681 caattgttcg ccgagccatc aggtcggagg aggagccacg gcagcaggat caacagtatc 1741 aggtgcacca ccgcccaccc aggaggcgga gaagaccatc acttcgctgg agatccaggt 1801 ggaggaacag agacagctgc gactccacga cgcacgacaa atcgaggcca aggcggccaa 1861 gatcaaggag tgggtgaaca acaagctacg cgatctcgag gagcagaacc agttgctgcg 1921 cgaacagaac gtcaagtgca accagcagtt ggagctgctc aagaatcaca tagccaatca 1981 atcgcagcgc cacagtatcg tgggtccggt gcgcaatagc ctcagcctag acgttcagga 2041 ctttgccggt tcggggtcca atcccgagca tcgcaggcga agcgagagtc tcgatccgca 2101 ggatcccatt attggccgac cgctgaccag ctcgtatccg catcaccagc acaggcgaaa 2161 cctctcgatg gagccgcagg aattggaacg aaatctggtg gccgctgtcg atggcctaac 2221 ccttgccccg ctgtccagca tctccagcaa agctcccgga tcagctgcca ggccagatag 2281 ctccgatacg gatacggccc atgattatgc ggagatttac acgccatcct gcgaaaagct 2341 acccgcctgg atgaagaaca atccggcatt gatggccagt ggcgggaatt ccagcaccac 2401 caccacaacc accagtgaac tgggcgtgcc acggcctccg acgccgccgc tgcatcgctt 2461 tcccagctgg gaggccaaga tctaccaggt ggccaacgat ggactggcgg gagctggcgg 2521 agggacggcg gagagtgcgg ccattcagga gccagatatt caagagggaa cgggcacggg 2581 aacgaatctc tccaatggcc gacgacatgg tcacagtcat ggatctggaa cgggaacggt 2641 aacggcggga actggggatg ggcacggtac cctgggcagt acaccgggaa cgccgctgcc 2701 accgtcgagg caacaacaaa ccgccagcgg cggcttctgt gatatatccg tgcccgtcta 2761 cgcaacggtc aagggtcgag cctcgcagat ccgctcgatg ccatttacgg gcgattcgag 2821 cgatgactcc agtgatggcg aggaccatgc ggtgatgctc acccatcatt cacacaactc 2881 gtcgagcacc gagaacacgg agacctcgac atcgggcagc gcttcgagtc cctcgaagag 2941 cctgaagacc tcctctagcc taagtccggc caagcgaagt ggttcggaga gtcccaagaa 3001 cgcgaaggcg cgtggcctct cggacgacta cgccctgccc cccgacgccg tgtcggagtc 3061 cacgtgcatg gacgcctcga tgccgtcgct gttgatgcga cagtcctacg tggattcgcc 3121 cagcaaaaag attgagtcgc tggagaagat gggtcacctg gccaagctgg gtggcaagct 3181 gaagacttgg cgcaagcgtt ggttcgttct aaagaacgga tccctcaact actggaagag 3241 ccagcacgat gtgcagcgga agccccaggg gcagatccaa ctggacgagg cctgtcgcat 3301 caatcgggcg gagggagcct ccaccttcga gatagacacg ggcaagaagg tctactacct 3361 cacggcggac tcgcatgcca ccatggacga ttggatccgg gtgctgcaga atgtgcagcg 3421 aaggaatgcc accaagctgc tgctgagtcg cgatgaccag aagccgacgg tgcagggttg 3481 ggtgaccaag gtgaagaacg gccatcccaa gaagtgctgg tgtgtgctgt tgggcaagat 3541 gttcctctac ttcaaggctc ctgttgagac gaatcccctg ggccagatta atatgcgcga 3601 tgcccgagtc gaggaggtgg aacacgtttc tgactcggac tccgaggagc gagaggatgc 3661 cgcccaggat caggcccgac tcacggtggc catctatccg gcgcaccagg gaccaaccta 3721 cctgatcctg tccgggaagc cagagcggga taattggctc tatcacctaa ctgtcgtttc 3781 gggcggcggc ccaagtgctg gcacccagta tgaacagctc gtacagaagc tcatggaaac 3841 ggatggcgat cctaactgcg tcctgtggcg ccatcccatt ctgctgcaca ccaaagacac 3901 catcaccgcg ccgctctcat caatgcacac ggaaaccatg cagccggagg ccattaagct 3961 cttcaagagc attcagctgt tcatgtcggt ggcggtcaac cagccgggca tcgattacca 4021 cgtggtgctc gcccagaacg ccctgcaaca tgctctggat atgcccgagc tgcagacgga 4081 gatgatctgc atactgatca agcagacctc ccgccacatg ggccagaagc tcagtgtcgg 4141 cgtccagcaa ctactgttgt gcgccaccca aagcctattc acctgtgata cccaacaggc 4201 gggccacgcc caagccaacg gcagttcgcc cacctccata caggctcctg ctgccacgcc 4261 cataatcgac tgcaaaagca acccgcccgc ctacagcttc gtccagggct ggcagctcct 4321 ggccctggcc gtatccctct ttgttccgcg ctcgagtcgc ctgctgtggt acctcaagct 4381 ccacttgtcc cggaatgcgg atacaaagac agagacgggc aagtacgccg cctactgtga 4441 gcgcgcgctg gagaggacgc ttaagaacgg gggccgcgag acgaaaccgt cgcggatgga 4501 ggttctatcg attctcctga agaatcccta ccaccactct ctgccgcatg cgattcccgt 4561 gcacatgatg aacaccacct accaggtggt ttcctttgat ggctccacca ccatcgagga 4621 gttccaggcc actttggccc acgaactggg cacgcgggat gccagcaatg ggttctgcct 4681 attcagcgac gatccaattg agaaggatct ggagcactac ctggagccgc tggccaagct 4741 gtgcgacgtg atcagcaaat gggagacggc tttaagggag aagggatcgg ggaagtttga 4801 gaattcgcgg gtgatccagc tgagctacaa gaaccgtctc tactggaagc acaccattaa 4861 gtgcgagacg gacaaggagc gcctgctgct gtgctaccag accaactcgc agattgtcca 4921 gggccgattc ccgctatccc gggagttggc tttggagctg gcctcgctga tgtcccagat 4981 cgacatgggc gactactcgc tggagaagtc ccgcgacgtg ggcgtgggcc tgaagggtct 5041 ggacaagttc tacccgtatc gctataggga cgctttgggc gccgagcagc tgaaggatgt 5101 gcaggagctg ctggtctcca agtggatgct gctcaagggt cgctccacgc tggactgtgt 5161 gcgcatttac ctcacctgct gccgcaagtg gccgtatttc ggagcctgcc tgttccaggc 5221 gaagcccaga cagagcccag aatcatccat gggcaccacg ggagcagcca ctccggttgc 5281 ctggctggcg gtggccgagg atgccctcaa cgtactcgag ctgtccacca tggcgccggt 5341 ggccaggtat ccatacagtt cggtgatgac ctttggcggc tgccaggacg actttatgct 5401 ggtggtttcc cacgacgacg gcagcggtga gcaaaagctc ctgtttgcca tgagcaagcc 5461 caagattctg gagatcacgc tgctcatagc ggactacatg aatgcactgg gccacacggt 5521 gccaggaacg ccgcagatga actcgctgac ccgcaacgga tcgcatcgct cgctgcgagc 5581 ctcccagcgt ccgactttgg gggccggcgg ctcggcggtg gccaccacca ccgggttctc 5641 cacgaacgcc accaccacgg cccacaacac gctcaattcg catgcgacgc acacgctcaa 5701 ctcgaaccac tcgcacacgc tgagcagctc ccatcacgcc ggcggcggcg gaggaggaag 5761 tcagccgggc acactgagct cgggtcatca tcatcctcag caccaccacc atcaccagca 5821 gcagcagcag caccaccagc ctgatatact aaagagcacg ccggatcatc agaggatcaa 5881 gtagattgga actaagattc ctaatagatc gagaagatag tagagaagat gggaggatca 5941 ttgtacatag acggaggatc ggatcacagc ttaacagaca tatacgacta aacagataca 6001 tatgcaccag cctagtggca acaaatatac acctaaagat agaaagatag aaagatataa 6061 agatagatgg atagatggat agcggtagag agacgacgta gcgtaatcgg cctgggttgg 6121 accttcttct ccttgcgcac cactcactaa agttctcttt cctaagctaa caacggtact 6181 cgtactctaa atctaaattg taaacaaaaa cagcagcagc agcaagcata ttatatatat 6241 attataaatt taattttttt gaatagtcct aagtccacgt accccaaaaa atgcaagagg 6301 tatgtgaaga agaagaaact taaacgtaaa cagaacatga atctcaatgt ttagattgtt 6361 cttgttcttg tcttattatt acctattatt aatattattt ttttgtattt tttttaacca 6421 acaaacaagc agccacaatg caaaacaacc tataaacacc tatagaaacg atatatttga 6481 gtgttctcgc tcttcgatgc tttgtaatga atctcaattt gtaattgtcc ctccatgcgc 6541 gaaactgcct tttgaatttg tagatgtcgg agccaagaac gagtaaaagc gaaaaacaaa 6601 aaagaaatca agccaaaaac aagcaaacta gcattagcag aaaccaattg agaaaacaag 6661 caaatatttt gtaaaggatt tttcaagccc agtgcaggac gaccatcaac caagcatccc 6721 catctacatc tagatattta cagtgaagcc ccgattcgta cggttaactg agggtcgatt 6781 tctcaatgtc atgttatggt tccggttagt taactgtcag agaaaactaa tttgaggtta 6841 aatggttcgg aagaactaaa tcgttttctc aatgtgatgt taatttaacc tgaaattaac 6901 ctgaacttaa cctgacattg agaaaacggc ccaaatacga taacgcgttc ttagcccgtt 6961 cagtgtctag atgtacaaca caaaaactca ctcaccagag cttcagcaga aaccttaaac 7021 acacaaatga aggtagtcaa caaaattcgg tagataaaca cgccccaatt aattattgcc 7081 cactttttta cacccgcgcc cacagaagca tatatgcatt catatatata catatagaat 7141 atatagaagg cagacggcag aaggtataca tgtattcgga ttcgatattt aacaaaatta 7201 tacacaccaa attaacgata taacaaacag tttatacggt aacagcgcat ttttttccta 7261 attgtaaaga tttgatatta caaatttata tgcgccgaga cgcaacgaaa acgaaaatgg 7321 aaattaaacg agaaaacgag agatcgaaca gagcatctca ttgggaagaa tcgaagaaaa 7381 tcgaaggctt gcaagtggat ataaactata taggcgaatg tatcacacat cacactccag 7441 tgaaacgaaa tatatataaa gggaaattaa cgattaaaac taaaccaaaa atga