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LOCUS XM_017151052 7524 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X7, mRNA. ACCESSION XM_017151052 VERSION XM_017151052.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151052.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7524 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7524 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063827" CDS 539..5914 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X6" /protein_id="XP_017006541.2" /db_xref="GeneID:108063827" /translation="MSDEVPLGRLSQIFDTLTNLQQQQQQHLRSQEQLHPPHPHSHPH THPQSPADQRRRSASSSPSPSASVSASTSGRATPSLGVASPLNTLQYYSHNAHNNYLL RPQDVATSGYLHTFPSHLYHHQQHHHQVHHLQQHSQPPSLPTQLGGGVTQRGCLSGSQ SLQGSPLLAKRATSFSGQIPMAQGRFGATGGGTGVTASTPNSPRLLPRRVPRPPPIPA KPNQVKTAAAASDQQQPRDSSSTAPTIVQSHVNPVLAALDAPDAPWPHFSTLTEHLDV HQVNNYGQALPEINWQERCLELQLELHRSKNQAGRIRDMLREKLTELEQRVIEAEERA EEAEDKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGG ATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKL RDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSN PEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLS SISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTT TSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGT NLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPV YATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSP SKSLKTSSSLSPAKRSGSESPKNAKARGLSDDYALPPDAVSESTCMDASMPSLLMRQS YVDSPSKKIESLEKMGHLAKLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQ LDEACRINRAEGASTFEIDTGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRD DQKPTVQGWVTKVKNGHPKKCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHV SDSDSEEREDAAQDQARLTVAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAG TQYEQLVQKLMETDGDPNCVLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQ LFMSVAVNQPGIDYHVVLAQNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQV NKKLGKQTRQLLLCATQSLFTCDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAY SFVQGWQLLALAVSLFVPRSSRLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKN GGRETKPSRMEVLSILLKNPYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAH ELGTRDASNGFCLFSDDPIEKDLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVI QLSYKNRLYWKHTIKCETDKERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMG DYSLEKSRDVGVGLKGLDKFYPYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVR IYLTCCRKWPYFGACLFQAKPRQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAP VARYPYSSVMTFGGCQDDFMLVVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALG HTVPGTPQMNSLTRNGSHRSLRASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHA THTLNSNHSHTLSSSHHAGGGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKST PDHQRIK" misc_feature <1763..>1990 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3146..3433 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 3464..3769 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 3887..4546 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 4574..4876 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 4583..5245 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 5231..5542 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 7524 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtgtgtctg cggcagtgcg tgtgtttgcc aggccaaaac gaaaagcgag gaaccaaagc 61 caaagaaagc taagcctatc ccaacaacaa caagtgcgcg aaagcagcca gaaggcaaaa 121 caacaataaa gcagcgtgga aacagctgtt cgtttccttt tttctcggcc cgaaaatgca 181 aaattaatac aattacaatg cggcggcgat aaaacaaaaa taaaaacaag cagagagcgg 241 agagaaaaaa acaaaaagta aaaagcattt accgtttaaa cagcaagaac aacaacaacg 301 acaacaaagc caagaaggag aggcacaaag aggaagaaga agagtttgcg cagtcacgtg 361 tgcagtcgac gtcgacggcg gccgcggcag aggaaaattc ccatgcggaa aattcacatt 421 cgcgatgatg atggaaagcg agacgatgat gatgaagctg ttgaaggagg gaaaaccagc 481 agcagcggca gcaacaacaa caactagcag ctgttagagc gagacagcta ccgcgtcaat 541 gtccgacgaa gtgcctttgg gtcgcctatc gcagatcttc gatacgctaa ccaatcttca 601 gcagcaacag cagcagcacc tgcgttccca ggagcaactg catcctccac atccgcattc 661 acatccgcat acacatccgc agtcgcctgc ggatcagcgt aggagatccg cctcctcatc 721 gccatcgcca tcggccagtg tctctgcctc gacttctggg cgggccacgc cttctttggg 781 cgtggccagc ccactgaata cactgcaata ctacagtcat aacgcccata ataactattt 841 gctgcggccg caagatgtcg ccaccagtgg ctacctgcac acctttcctt cgcatttgta 901 tcatcatcag cagcatcatc accaagtgca ccacctgcag cagcacagcc aaccgccctc 961 actgcccacc caattgggag gcggggtaac ccaacgtggc tgtctatcgg gctcacaatc 1021 gctgcaggga tcaccacttt tggccaagag ggcaacctcc tttagtgggc aaataccaat 1081 ggctcagggt cgattcggag ccaccggagg aggaactgga gtcactgcat ccacaccgaa 1141 tagcccgagg cttctgcctc gacgtgtgcc acgcccaccg cccattccgg ccaagccgaa 1201 tcaggtgaag acggcggcgg cagcgtcgga tcaacaacag cccagggatt cttcttcgac 1261 tgccccgacg attgttcagt cgcatgtgaa tcccgtgctg gctgctctcg atgcaccaga 1321 tgctccatgg ccacactttt cgacgctcac cgagcacttg gacgtccacc aggtgaacaa 1381 ctacggacag gctctgccgg agattaactg gcaggaacga tgtttggagc tgcaactgga 1441 gctgcatcgg tcgaagaatc aggcgggtcg tatacgcgat atgctgcgtg aaaagctaac 1501 ggagctggaa caacgcgtca ttgaagcgga agaacgcgcc gaggaagccg aagataaggt 1561 gcgtgccatg gagcagcggc tgagtgagtg gcccaagcca ccgccccagc atccgcatcc 1621 gcaccagcca gtgccagcca gtcatccgca ggagcagcag cagcagcagc aggccagaag 1681 caattgttcg ccgagccatc aggtcggagg aggagccacg gcagcaggat caacagtatc 1741 aggtgcacca ccgcccaccc aggaggcgga gaagaccatc acttcgctgg agatccaggt 1801 ggaggaacag agacagctgc gactccacga cgcacgacaa atcgaggcca aggcggccaa 1861 gatcaaggag tgggtgaaca acaagctacg cgatctcgag gagcagaacc agttgctgcg 1921 cgaacagaac gtcaagtgca accagcagtt ggagctgctc aagaatcaca tagccaatca 1981 atcgcagcgc cacagtatcg tgggtccggt gcgcaatagc ctcagcctag acgttcagga 2041 ctttgccggt tcggggtcca atcccgagca tcgcaggcga agcgagagtc tcgatccgca 2101 ggatcccatt attggccgac cgctgaccag ctcgtatccg catcaccagc acaggcgaaa 2161 cctctcgatg gagccgcagg aattggaacg aaatctggtg gccgctgtcg atggcctaac 2221 ccttgccccg ctgtccagca tctccagcaa agctcccgga tcagctgcca ggccagatag 2281 ctccgatacg gatacggccc atgattatgc ggagatttac acgccatcct gcgaaaagct 2341 acccgcctgg atgaagaaca atccggcatt gatggccagt ggcgggaatt ccagcaccac 2401 caccacaacc accagtgaac tgggcgtgcc acggcctccg acgccgccgc tgcatcgctt 2461 tcccagctgg gaggccaaga tctaccaggt ggccaacgat ggactggcgg gagctggcgg 2521 agggacggcg gagagtgcgg ccattcagga gccagatatt caagagggaa cgggcacggg 2581 aacgaatctc tccaatggcc gacgacatgg tcacagtcat ggatctggaa cgggaacggt 2641 aacggcggga actggggatg ggcacggtac cctgggcagt acaccgggaa cgccgctgcc 2701 accgtcgagg caacaacaaa ccgccagcgg cggcttctgt gatatatccg tgcccgtcta 2761 cgcaacggtc aagggtcgag cctcgcagat ccgctcgatg ccatttacgg gcgattcgag 2821 cgatgactcc agtgatggcg aggaccatgc ggtgatgctc acccatcatt cacacaactc 2881 gtcgagcacc gagaacacgg agacctcgac atcgggcagc gcttcgagtc cctcgaagag 2941 cctgaagacc tcctctagcc taagtccggc caagcgaagt ggttcggaga gtcccaagaa 3001 cgcgaaggcg cgtggcctct cggacgacta cgccctgccc cccgacgccg tgtcggagtc 3061 cacgtgcatg gacgcctcga tgccgtcgct gttgatgcga cagtcctacg tggattcgcc 3121 cagcaaaaag attgagtcgc tggagaagat gggtcacctg gccaagctgg gtggcaagct 3181 gaagacttgg cgcaagcgtt ggttcgttct aaagaacgga tccctcaact actggaagag 3241 ccagcacgat gtgcagcgga agccccaggg gcagatccaa ctggacgagg cctgtcgcat 3301 caatcgggcg gagggagcct ccaccttcga gatagacacg ggcaagaagg tctactacct 3361 cacggcggac tcgcatgcca ccatggacga ttggatccgg gtgctgcaga atgtgcagcg 3421 aaggaatgcc accaagctgc tgctgagtcg cgatgaccag aagccgacgg tgcagggttg 3481 ggtgaccaag gtgaagaacg gccatcccaa gaagtgctgg tgtgtgctgt tgggcaagat 3541 gttcctctac ttcaaggctc ctgttgagac gaatcccctg ggccagatta atatgcgcga 3601 tgcccgagtc gaggaggtgg aacacgtttc tgactcggac tccgaggagc gagaggatgc 3661 cgcccaggat caggcccgac tcacggtggc catctatccg gcgcaccagg gaccaaccta 3721 cctgatcctg tccgggaagc cagagcggga taattggctc tatcacctaa ctgtcgtttc 3781 gggcggcggc ccaagtgctg gcacccagta tgaacagctc gtacagaagc tcatggaaac 3841 ggatggcgat cctaactgcg tcctgtggcg ccatcccatt ctgctgcaca ccaaagacac 3901 catcaccgcg ccgctctcat caatgcacac ggaaaccatg cagccggagg ccattaagct 3961 cttcaagagc attcagctgt tcatgtcggt ggcggtcaac cagccgggca tcgattacca 4021 cgtggtgctc gcccagaacg ccctgcaaca tgctctggat atgcccgagc tgcagacgga 4081 gatgatctgc atactgatca agcagacctc ccgccacatg ggccagaagc tcagtgtcgg 4141 cgtccaggta aacaagaagc tgggcaagca aacgcgccaa ctactgttgt gcgccaccca 4201 aagcctattc acctgtgata cccaacaggc gggccacgcc caagccaacg gcagttcgcc 4261 cacctccata caggctcctg ctgccacgcc cataatcgac tgcaaaagca acccgcccgc 4321 ctacagcttc gtccagggct ggcagctcct ggccctggcc gtatccctct ttgttccgcg 4381 ctcgagtcgc ctgctgtggt acctcaagct ccacttgtcc cggaatgcgg atacaaagac 4441 agagacgggc aagtacgccg cctactgtga gcgcgcgctg gagaggacgc ttaagaacgg 4501 gggccgcgag acgaaaccgt cgcggatgga ggttctatcg attctcctga agaatcccta 4561 ccaccactct ctgccgcatg cgattcccgt gcacatgatg aacaccacct accaggtggt 4621 ttcctttgat ggctccacca ccatcgagga gttccaggcc actttggccc acgaactggg 4681 cacgcgggat gccagcaatg ggttctgcct attcagcgac gatccaattg agaaggatct 4741 ggagcactac ctggagccgc tggccaagct gtgcgacgtg atcagcaaat gggagacggc 4801 tttaagggag aagggatcgg ggaagtttga gaattcgcgg gtgatccagc tgagctacaa 4861 gaaccgtctc tactggaagc acaccattaa gtgcgagacg gacaaggagc gcctgctgct 4921 gtgctaccag accaactcgc agattgtcca gggccgattc ccgctatccc gggagttggc 4981 tttggagctg gcctcgctga tgtcccagat cgacatgggc gactactcgc tggagaagtc 5041 ccgcgacgtg ggcgtgggcc tgaagggtct ggacaagttc tacccgtatc gctataggga 5101 cgctttgggc gccgagcagc tgaaggatgt gcaggagctg ctggtctcca agtggatgct 5161 gctcaagggt cgctccacgc tggactgtgt gcgcatttac ctcacctgct gccgcaagtg 5221 gccgtatttc ggagcctgcc tgttccaggc gaagcccaga cagagcccag aatcatccat 5281 gggcaccacg ggagcagcca ctccggttgc ctggctggcg gtggccgagg atgccctcaa 5341 cgtactcgag ctgtccacca tggcgccggt ggccaggtat ccatacagtt cggtgatgac 5401 ctttggcggc tgccaggacg actttatgct ggtggtttcc cacgacgacg gcagcggtga 5461 gcaaaagctc ctgtttgcca tgagcaagcc caagattctg gagatcacgc tgctcatagc 5521 ggactacatg aatgcactgg gccacacggt gccaggaacg ccgcagatga actcgctgac 5581 ccgcaacgga tcgcatcgct cgctgcgagc ctcccagcgt ccgactttgg gggccggcgg 5641 ctcggcggtg gccaccacca ccgggttctc cacgaacgcc accaccacgg cccacaacac 5701 gctcaattcg catgcgacgc acacgctcaa ctcgaaccac tcgcacacgc tgagcagctc 5761 ccatcacgcc ggcggcggcg gaggaggaag tcagccgggc acactgagct cgggtcatca 5821 tcatcctcag caccaccacc atcaccagca gcagcagcag caccaccagc ctgatatact 5881 aaagagcacg ccggatcatc agaggatcaa gtagattgga actaagattc ctaatagatc 5941 gagaagatag tagagaagat gggaggatca ttgtacatag acggaggatc ggatcacagc 6001 ttaacagaca tatacgacta aacagataca tatgcaccag cctagtggca acaaatatac 6061 acctaaagat agaaagatag aaagatataa agatagatgg atagatggat agcggtagag 6121 agacgacgta gcgtaatcgg cctgggttgg accttcttct ccttgcgcac cactcactaa 6181 agttctcttt cctaagctaa caacggtact cgtactctaa atctaaattg taaacaaaaa 6241 cagcagcagc agcaagcata ttatatatat attataaatt taattttttt gaatagtcct 6301 aagtccacgt accccaaaaa atgcaagagg tatgtgaaga agaagaaact taaacgtaaa 6361 cagaacatga atctcaatgt ttagattgtt cttgttcttg tcttattatt acctattatt 6421 aatattattt ttttgtattt tttttaacca acaaacaagc agccacaatg caaaacaacc 6481 tataaacacc tatagaaacg atatatttga gtgttctcgc tcttcgatgc tttgtaatga 6541 atctcaattt gtaattgtcc ctccatgcgc gaaactgcct tttgaatttg tagatgtcgg 6601 agccaagaac gagtaaaagc gaaaaacaaa aaagaaatca agccaaaaac aagcaaacta 6661 gcattagcag aaaccaattg agaaaacaag caaatatttt gtaaaggatt tttcaagccc 6721 agtgcaggac gaccatcaac caagcatccc catctacatc tagatattta cagtgaagcc 6781 ccgattcgta cggttaactg agggtcgatt tctcaatgtc atgttatggt tccggttagt 6841 taactgtcag agaaaactaa tttgaggtta aatggttcgg aagaactaaa tcgttttctc 6901 aatgtgatgt taatttaacc tgaaattaac ctgaacttaa cctgacattg agaaaacggc 6961 ccaaatacga taacgcgttc ttagcccgtt cagtgtctag atgtacaaca caaaaactca 7021 ctcaccagag cttcagcaga aaccttaaac acacaaatga aggtagtcaa caaaattcgg 7081 tagataaaca cgccccaatt aattattgcc cactttttta cacccgcgcc cacagaagca 7141 tatatgcatt catatatata catatagaat atatagaagg cagacggcag aaggtataca 7201 tgtattcgga ttcgatattt aacaaaatta tacacaccaa attaacgata taacaaacag 7261 tttatacggt aacagcgcat ttttttccta attgtaaaga tttgatatta caaatttata 7321 tgcgccgaga cgcaacgaaa acgaaaatgg aaattaaacg agaaaacgag agatcgaaca 7381 gagcatctca ttgggaagaa tcgaagaaaa tcgaaggctt gcaagtggat ataaactata 7441 taggcgaatg tatcacacat cacactccag tgaaacgaaa tatatataaa gggaaattaa 7501 cgattaaaac taaaccaaaa atga