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LOCUS XM_017151047 7719 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X4, mRNA. ACCESSION XM_017151047 VERSION XM_017151047.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151047.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7719 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7719 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063827" CDS 539..6109 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X3" /protein_id="XP_017006536.2" /db_xref="GeneID:108063827" /translation="MSDEVPLGRLSQIFDTLTNLQQQQQQHLRSQEQLHPPHPHSHPH THPQSPADQRRRSASSSPSPSASVSASTSGRATPSLGVASPLNTLQYYSHNAHNNYLL RPQDVATSGYLHTFPSHLYHHQQHHHQVHHLQQHSQPPSLPTQLGGGVTQRGCLSGSQ SLQGSPLLAKRATSFSGQIPMAQGRFGATGGGTGVTASTPNSPRLLPRRVPRPPPIPA KPNQVKTAAAASDQQQPRDSSSTAPTIVQSHVNPVLAALDAPDAPWPHFSTLTEHLDV HQVNNYGQALPEINWQERCLELQLELHRSKNQAGRIRDMLREKLTELEQRVIEAEERA EEAEDKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGG ATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKL RDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSN PEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLS SISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTT TSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGT NLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPV YATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSP SKSLKTSSSLSPAKRSGSESPKNAKARVHLQPRTTSTSHTNQQHLQPQSFHTHTHHQH HTLPHQYQVQNHNHQLGAYTLAPSSGQITLPRPHGHALQTPTASKAPSPLQQHMRGTV ISDLSFESGLSDDYALPPDAVSESTCMDASMPSLLMRQSYVDSPSKKIESLEKMGHLA KLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQLDEACRINRAEGASTFEID TGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRDDQKPTVQGWVTKVKNGHPK KCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHVSDSDSEEREDAAQDQARLT VAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAGTQYEQLVQKLMETDGDPNC VLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQLFMSVAVNQPGIDYHVVLA QNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQVNKKLGKQTRAPAATPIIDC KSNPPAYSFVQGWQLLALAVSLFVPRSSRLLWYLKLHLSRNADTKTETGKYAAYCERA LERTLKNGGRETKPSRMEVLSILLKNPYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEE FQATLAHELGTRDASNGFCLFSDDPIEKDLEHYLEPLAKLCDVISKWETALREKGSGK FENSRVIQLSYKNRLYWKHTIKCETDKERLLLCYQTNSQIVQGRFPLSRELALELASL MSQIDMGDYSLEKSRDVGVGLKGLDKFYPYRYRDALGAEQLKDVQELLVSKWMLLKGR STLDCVRIYLTCCRKWPYFGACLFQAKPRQSPESSMGTTGAATPVAWLAVAEDALNVL ELSTMAPVARYPYSSVMTFGGCQDDFMLVVSHDDGSGEQKLLFAMSKPKILEITLLIA DYMNALGHTVPGTPQMNSLTRNGSHRSLRASQRPTLGAGGSAVATTTGFSTNATTTAH NTLNSHATHTLNSNHSHTLSSSHHAGGGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQ PDILKSTPDHQRIK" misc_feature <1763..>1990 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3437..3724 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 3755..4060 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 4178..4741 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 4769..5071 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 4778..5440 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 5426..5737 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 7719 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtgtgtctg cggcagtgcg tgtgtttgcc aggccaaaac gaaaagcgag gaaccaaagc 61 caaagaaagc taagcctatc ccaacaacaa caagtgcgcg aaagcagcca gaaggcaaaa 121 caacaataaa gcagcgtgga aacagctgtt cgtttccttt tttctcggcc cgaaaatgca 181 aaattaatac aattacaatg cggcggcgat aaaacaaaaa taaaaacaag cagagagcgg 241 agagaaaaaa acaaaaagta aaaagcattt accgtttaaa cagcaagaac aacaacaacg 301 acaacaaagc caagaaggag aggcacaaag aggaagaaga agagtttgcg cagtcacgtg 361 tgcagtcgac gtcgacggcg gccgcggcag aggaaaattc ccatgcggaa aattcacatt 421 cgcgatgatg atggaaagcg agacgatgat gatgaagctg ttgaaggagg gaaaaccagc 481 agcagcggca gcaacaacaa caactagcag ctgttagagc gagacagcta ccgcgtcaat 541 gtccgacgaa gtgcctttgg gtcgcctatc gcagatcttc gatacgctaa ccaatcttca 601 gcagcaacag cagcagcacc tgcgttccca ggagcaactg catcctccac atccgcattc 661 acatccgcat acacatccgc agtcgcctgc ggatcagcgt aggagatccg cctcctcatc 721 gccatcgcca tcggccagtg tctctgcctc gacttctggg cgggccacgc cttctttggg 781 cgtggccagc ccactgaata cactgcaata ctacagtcat aacgcccata ataactattt 841 gctgcggccg caagatgtcg ccaccagtgg ctacctgcac acctttcctt cgcatttgta 901 tcatcatcag cagcatcatc accaagtgca ccacctgcag cagcacagcc aaccgccctc 961 actgcccacc caattgggag gcggggtaac ccaacgtggc tgtctatcgg gctcacaatc 1021 gctgcaggga tcaccacttt tggccaagag ggcaacctcc tttagtgggc aaataccaat 1081 ggctcagggt cgattcggag ccaccggagg aggaactgga gtcactgcat ccacaccgaa 1141 tagcccgagg cttctgcctc gacgtgtgcc acgcccaccg cccattccgg ccaagccgaa 1201 tcaggtgaag acggcggcgg cagcgtcgga tcaacaacag cccagggatt cttcttcgac 1261 tgccccgacg attgttcagt cgcatgtgaa tcccgtgctg gctgctctcg atgcaccaga 1321 tgctccatgg ccacactttt cgacgctcac cgagcacttg gacgtccacc aggtgaacaa 1381 ctacggacag gctctgccgg agattaactg gcaggaacga tgtttggagc tgcaactgga 1441 gctgcatcgg tcgaagaatc aggcgggtcg tatacgcgat atgctgcgtg aaaagctaac 1501 ggagctggaa caacgcgtca ttgaagcgga agaacgcgcc gaggaagccg aagataaggt 1561 gcgtgccatg gagcagcggc tgagtgagtg gcccaagcca ccgccccagc atccgcatcc 1621 gcaccagcca gtgccagcca gtcatccgca ggagcagcag cagcagcagc aggccagaag 1681 caattgttcg ccgagccatc aggtcggagg aggagccacg gcagcaggat caacagtatc 1741 aggtgcacca ccgcccaccc aggaggcgga gaagaccatc acttcgctgg agatccaggt 1801 ggaggaacag agacagctgc gactccacga cgcacgacaa atcgaggcca aggcggccaa 1861 gatcaaggag tgggtgaaca acaagctacg cgatctcgag gagcagaacc agttgctgcg 1921 cgaacagaac gtcaagtgca accagcagtt ggagctgctc aagaatcaca tagccaatca 1981 atcgcagcgc cacagtatcg tgggtccggt gcgcaatagc ctcagcctag acgttcagga 2041 ctttgccggt tcggggtcca atcccgagca tcgcaggcga agcgagagtc tcgatccgca 2101 ggatcccatt attggccgac cgctgaccag ctcgtatccg catcaccagc acaggcgaaa 2161 cctctcgatg gagccgcagg aattggaacg aaatctggtg gccgctgtcg atggcctaac 2221 ccttgccccg ctgtccagca tctccagcaa agctcccgga tcagctgcca ggccagatag 2281 ctccgatacg gatacggccc atgattatgc ggagatttac acgccatcct gcgaaaagct 2341 acccgcctgg atgaagaaca atccggcatt gatggccagt ggcgggaatt ccagcaccac 2401 caccacaacc accagtgaac tgggcgtgcc acggcctccg acgccgccgc tgcatcgctt 2461 tcccagctgg gaggccaaga tctaccaggt ggccaacgat ggactggcgg gagctggcgg 2521 agggacggcg gagagtgcgg ccattcagga gccagatatt caagagggaa cgggcacggg 2581 aacgaatctc tccaatggcc gacgacatgg tcacagtcat ggatctggaa cgggaacggt 2641 aacggcggga actggggatg ggcacggtac cctgggcagt acaccgggaa cgccgctgcc 2701 accgtcgagg caacaacaaa ccgccagcgg cggcttctgt gatatatccg tgcccgtcta 2761 cgcaacggtc aagggtcgag cctcgcagat ccgctcgatg ccatttacgg gcgattcgag 2821 cgatgactcc agtgatggcg aggaccatgc ggtgatgctc acccatcatt cacacaactc 2881 gtcgagcacc gagaacacgg agacctcgac atcgggcagc gcttcgagtc cctcgaagag 2941 cctgaagacc tcctctagcc taagtccggc caagcgaagt ggttcggaga gtcccaagaa 3001 cgcgaaggcg cgtgtccacc tccaaccacg caccacatcc accagccaca ccaaccaaca 3061 gcatctccaa ccgcaatcgt tccatacgca tacgcaccac caacaccaca cactgcccca 3121 ccaataccaa gtccagaatc ataaccacca gttgggggcc tacacgctgg cgccttcgag 3181 tgggcagata acgctgccgc gtccccatgg ccacgccctc caaactccaa ccgcctccaa 3241 agccccctca cccctccagc agcacatgcg tggcacagta atttcagatc tctcctttga 3301 atcaggcctc tcggacgact acgccctgcc ccccgacgcc gtgtcggagt ccacgtgcat 3361 ggacgcctcg atgccgtcgc tgttgatgcg acagtcctac gtggattcgc ccagcaaaaa 3421 gattgagtcg ctggagaaga tgggtcacct ggccaagctg ggtggcaagc tgaagacttg 3481 gcgcaagcgt tggttcgttc taaagaacgg atccctcaac tactggaaga gccagcacga 3541 tgtgcagcgg aagccccagg ggcagatcca actggacgag gcctgtcgca tcaatcgggc 3601 ggagggagcc tccaccttcg agatagacac gggcaagaag gtctactacc tcacggcgga 3661 ctcgcatgcc accatggacg attggatccg ggtgctgcag aatgtgcagc gaaggaatgc 3721 caccaagctg ctgctgagtc gcgatgacca gaagccgacg gtgcagggtt gggtgaccaa 3781 ggtgaagaac ggccatccca agaagtgctg gtgtgtgctg ttgggcaaga tgttcctcta 3841 cttcaaggct cctgttgaga cgaatcccct gggccagatt aatatgcgcg atgcccgagt 3901 cgaggaggtg gaacacgttt ctgactcgga ctccgaggag cgagaggatg ccgcccagga 3961 tcaggcccga ctcacggtgg ccatctatcc ggcgcaccag ggaccaacct acctgatcct 4021 gtccgggaag ccagagcggg ataattggct ctatcaccta actgtcgttt cgggcggcgg 4081 cccaagtgct ggcacccagt atgaacagct cgtacagaag ctcatggaaa cggatggcga 4141 tcctaactgc gtcctgtggc gccatcccat tctgctgcac accaaagaca ccatcaccgc 4201 gccgctctca tcaatgcaca cggaaaccat gcagccggag gccattaagc tcttcaagag 4261 cattcagctg ttcatgtcgg tggcggtcaa ccagccgggc atcgattacc acgtggtgct 4321 cgcccagaac gccctgcaac atgctctgga tatgcccgag ctgcagacgg agatgatctg 4381 catactgatc aagcagacct cccgccacat gggccagaag ctcagtgtcg gcgtccaggt 4441 aaacaagaag ctgggcaagc aaacgcgcgc tcctgctgcc acgcccataa tcgactgcaa 4501 aagcaacccg cccgcctaca gcttcgtcca gggctggcag ctcctggccc tggccgtatc 4561 cctctttgtt ccgcgctcga gtcgcctgct gtggtacctc aagctccact tgtcccggaa 4621 tgcggataca aagacagaga cgggcaagta cgccgcctac tgtgagcgcg cgctggagag 4681 gacgcttaag aacgggggcc gcgagacgaa accgtcgcgg atggaggttc tatcgattct 4741 cctgaagaat ccctaccacc actctctgcc gcatgcgatt cccgtgcaca tgatgaacac 4801 cacctaccag gtggtttcct ttgatggctc caccaccatc gaggagttcc aggccacttt 4861 ggcccacgaa ctgggcacgc gggatgccag caatgggttc tgcctattca gcgacgatcc 4921 aattgagaag gatctggagc actacctgga gccgctggcc aagctgtgcg acgtgatcag 4981 caaatgggag acggctttaa gggagaaggg atcggggaag tttgagaatt cgcgggtgat 5041 ccagctgagc tacaagaacc gtctctactg gaagcacacc attaagtgcg agacggacaa 5101 ggagcgcctg ctgctgtgct accagaccaa ctcgcagatt gtccagggcc gattcccgct 5161 atcccgggag ttggctttgg agctggcctc gctgatgtcc cagatcgaca tgggcgacta 5221 ctcgctggag aagtcccgcg acgtgggcgt gggcctgaag ggtctggaca agttctaccc 5281 gtatcgctat agggacgctt tgggcgccga gcagctgaag gatgtgcagg agctgctggt 5341 ctccaagtgg atgctgctca agggtcgctc cacgctggac tgtgtgcgca tttacctcac 5401 ctgctgccgc aagtggccgt atttcggagc ctgcctgttc caggcgaagc ccagacagag 5461 cccagaatca tccatgggca ccacgggagc agccactccg gttgcctggc tggcggtggc 5521 cgaggatgcc ctcaacgtac tcgagctgtc caccatggcg ccggtggcca ggtatccata 5581 cagttcggtg atgacctttg gcggctgcca ggacgacttt atgctggtgg tttcccacga 5641 cgacggcagc ggtgagcaaa agctcctgtt tgccatgagc aagcccaaga ttctggagat 5701 cacgctgctc atagcggact acatgaatgc actgggccac acggtgccag gaacgccgca 5761 gatgaactcg ctgacccgca acggatcgca tcgctcgctg cgagcctccc agcgtccgac 5821 tttgggggcc ggcggctcgg cggtggccac caccaccggg ttctccacga acgccaccac 5881 cacggcccac aacacgctca attcgcatgc gacgcacacg ctcaactcga accactcgca 5941 cacgctgagc agctcccatc acgccggcgg cggcggagga ggaagtcagc cgggcacact 6001 gagctcgggt catcatcatc ctcagcacca ccaccatcac cagcagcagc agcagcacca 6061 ccagcctgat atactaaaga gcacgccgga tcatcagagg atcaagtaga ttggaactaa 6121 gattcctaat agatcgagaa gatagtagag aagatgggag gatcattgta catagacgga 6181 ggatcggatc acagcttaac agacatatac gactaaacag atacatatgc accagcctag 6241 tggcaacaaa tatacaccta aagatagaaa gatagaaaga tataaagata gatggataga 6301 tggatagcgg tagagagacg acgtagcgta atcggcctgg gttggacctt cttctccttg 6361 cgcaccactc actaaagttc tctttcctaa gctaacaacg gtactcgtac tctaaatcta 6421 aattgtaaac aaaaacagca gcagcagcaa gcatattata tatatattat aaatttaatt 6481 tttttgaata gtcctaagtc cacgtacccc aaaaaatgca agaggtatgt gaagaagaag 6541 aaacttaaac gtaaacagaa catgaatctc aatgtttaga ttgttcttgt tcttgtctta 6601 ttattaccta ttattaatat tatttttttg tatttttttt aaccaacaaa caagcagcca 6661 caatgcaaaa caacctataa acacctatag aaacgatata tttgagtgtt ctcgctcttc 6721 gatgctttgt aatgaatctc aatttgtaat tgtccctcca tgcgcgaaac tgccttttga 6781 atttgtagat gtcggagcca agaacgagta aaagcgaaaa acaaaaaaga aatcaagcca 6841 aaaacaagca aactagcatt agcagaaacc aattgagaaa acaagcaaat attttgtaaa 6901 ggatttttca agcccagtgc aggacgacca tcaaccaagc atccccatct acatctagat 6961 atttacagtg aagccccgat tcgtacggtt aactgagggt cgatttctca atgtcatgtt 7021 atggttccgg ttagttaact gtcagagaaa actaatttga ggttaaatgg ttcggaagaa 7081 ctaaatcgtt ttctcaatgt gatgttaatt taacctgaaa ttaacctgaa cttaacctga 7141 cattgagaaa acggcccaaa tacgataacg cgttcttagc ccgttcagtg tctagatgta 7201 caacacaaaa actcactcac cagagcttca gcagaaacct taaacacaca aatgaaggta 7261 gtcaacaaaa ttcggtagat aaacacgccc caattaatta ttgcccactt ttttacaccc 7321 gcgcccacag aagcatatat gcattcatat atatacatat agaatatata gaaggcagac 7381 ggcagaaggt atacatgtat tcggattcga tatttaacaa aattatacac accaaattaa 7441 cgatataaca aacagtttat acggtaacag cgcatttttt tcctaattgt aaagatttga 7501 tattacaaat ttatatgcgc cgagacgcaa cgaaaacgaa aatggaaatt aaacgagaaa 7561 acgagagatc gaacagagca tctcattggg aagaatcgaa gaaaatcgaa ggcttgcaag 7621 tggatataaa ctatataggc gaatgtatca cacatcacac tccagtgaaa cgaaatatat 7681 ataaagggaa attaacgatt aaaactaaac caaaaatga