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LOCUS XM_017151045 7941 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X2, mRNA. ACCESSION XM_017151045 VERSION XM_017151045.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151045.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7941 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7941 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063827" CDS 665..6331 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X1" /protein_id="XP_017006534.2" /db_xref="GeneID:108063827" /translation="MSDEVPLGRLSQIFDTLTNLQQQQQQHLRSQEQLHPPHPHSHPH THPQSPADQRRRSASSSPSPSASVSASTSGRATPSLGVASPLNTLQYYSHNAHNNYLL RPQDVATSGYLHTFPSHLYHHQQHHHQVHHLQQHSQPPSLPTQLGGGVTQRGCLSGSQ SLQGSPLLAKRATSFSGQIPMAQGRFGATGGGTGVTASTPNSPRLLPRRVPRPPPIPA KPNQVKTAAAASDQQQPRDSSSTAPTIVQSHVNPVLAALDAPDAPWPHFSTLTEHLDV HQVNNYGQALPEINWQERCLELQLELHRSKNQAGRIRDMLREKLTELEQRVIEAEERA EEAEDKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGG ATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKL RDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSN PEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLS SISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTT TSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGT NLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPV YATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSP SKSLKTSSSLSPAKRSGSESPKNAKARVHLQPRTTSTSHTNQQHLQPQSFHTHTHHQH HTLPHQYQVQNHNHQLGAYTLAPSSGQITLPRPHGHALQTPTASKAPSPLQQHMRGTV ISDLSFESGLSDDYALPPDAVSESTCMDASMPSLLMRQSYVDSPSKKIESLEKMGHLA KLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQLDEACRINRAEGASTFEID TGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRDDQKPTVQGWVTKVKNGHPK KCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHVSDSDSEEREDAAQDQARLT VAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAGTQYEQLVQKLMETDGDPNC VLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQLFMSVAVNQPGIDYHVVLA QNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQVNKKLGKQTRQLLLCATQSL FTCDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAYSFVQGWQLLALAVSLFVPR SSRLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKNGGRETKPSRMEVLSILLKN PYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAHELGTRDASNGFCLFSDDPI EKDLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVIQLSYKNRLYWKHTIKCETD KERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSRDVGVGLKGLDK FYPYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVRIYLTCCRKWPYFGACLFQA KPRQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAPVARYPYSSVMTFGGCQDDF MLVVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALGHTVPGTPQMNSLTRNGSHR SLRASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHATHTLNSNHSHTLSSSHHAG GGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKSTPDHQRIK" misc_feature <1889..>2116 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3563..3850 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 3881..4186 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 4304..4963 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 4991..5293 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 5000..5662 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 5648..5959 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 7941 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccatcgccaa gttaagttcg tgttttcgtg tctcttggtt tttcgcgaaa ttcgtctttg 61 gattgttact aactaataat tgttgttgtg cgtcgcgttg ttctgttttt ttttaactgt 121 ttttagcgtg tgtctgcggc agtgcgtgtg tttgccaggc caaaacgaaa agcgaggaac 181 caaagccaaa gaaagctaag cctatcccaa caacaacaag tgcgcgaaag cagccagaag 241 gcaaaacaac aataaagcag cgtggaaaca gctgttcgtt tccttttttc tcggcccgaa 301 aatgcaaaat taatacaatt acaatgcggc ggcgataaaa caaaaataaa aacaagcaga 361 gagcggagag aaaaaaacaa aaagtaaaaa gcatttaccg tttaaacagc aagaacaaca 421 acaacgacaa caaagccaag aaggagaggc acaaagagga agaagaagag tttgcgcagt 481 cacgtgtgca gtcgacgtcg acggcggccg cggcagagga aaattcccat gcggaaaatt 541 cacattcgcg atgatgatgg aaagcgagac gatgatgatg aagctgttga aggagggaaa 601 accagcagca gcggcagcaa caacaacaac tagcagctgt tagagcgaga cagctaccgc 661 gtcaatgtcc gacgaagtgc ctttgggtcg cctatcgcag atcttcgata cgctaaccaa 721 tcttcagcag caacagcagc agcacctgcg ttcccaggag caactgcatc ctccacatcc 781 gcattcacat ccgcatacac atccgcagtc gcctgcggat cagcgtagga gatccgcctc 841 ctcatcgcca tcgccatcgg ccagtgtctc tgcctcgact tctgggcggg ccacgccttc 901 tttgggcgtg gccagcccac tgaatacact gcaatactac agtcataacg cccataataa 961 ctatttgctg cggccgcaag atgtcgccac cagtggctac ctgcacacct ttccttcgca 1021 tttgtatcat catcagcagc atcatcacca agtgcaccac ctgcagcagc acagccaacc 1081 gccctcactg cccacccaat tgggaggcgg ggtaacccaa cgtggctgtc tatcgggctc 1141 acaatcgctg cagggatcac cacttttggc caagagggca acctccttta gtgggcaaat 1201 accaatggct cagggtcgat tcggagccac cggaggagga actggagtca ctgcatccac 1261 accgaatagc ccgaggcttc tgcctcgacg tgtgccacgc ccaccgccca ttccggccaa 1321 gccgaatcag gtgaagacgg cggcggcagc gtcggatcaa caacagccca gggattcttc 1381 ttcgactgcc ccgacgattg ttcagtcgca tgtgaatccc gtgctggctg ctctcgatgc 1441 accagatgct ccatggccac acttttcgac gctcaccgag cacttggacg tccaccaggt 1501 gaacaactac ggacaggctc tgccggagat taactggcag gaacgatgtt tggagctgca 1561 actggagctg catcggtcga agaatcaggc gggtcgtata cgcgatatgc tgcgtgaaaa 1621 gctaacggag ctggaacaac gcgtcattga agcggaagaa cgcgccgagg aagccgaaga 1681 taaggtgcgt gccatggagc agcggctgag tgagtggccc aagccaccgc cccagcatcc 1741 gcatccgcac cagccagtgc cagccagtca tccgcaggag cagcagcagc agcagcaggc 1801 cagaagcaat tgttcgccga gccatcaggt cggaggagga gccacggcag caggatcaac 1861 agtatcaggt gcaccaccgc ccacccagga ggcggagaag accatcactt cgctggagat 1921 ccaggtggag gaacagagac agctgcgact ccacgacgca cgacaaatcg aggccaaggc 1981 ggccaagatc aaggagtggg tgaacaacaa gctacgcgat ctcgaggagc agaaccagtt 2041 gctgcgcgaa cagaacgtca agtgcaacca gcagttggag ctgctcaaga atcacatagc 2101 caatcaatcg cagcgccaca gtatcgtggg tccggtgcgc aatagcctca gcctagacgt 2161 tcaggacttt gccggttcgg ggtccaatcc cgagcatcgc aggcgaagcg agagtctcga 2221 tccgcaggat cccattattg gccgaccgct gaccagctcg tatccgcatc accagcacag 2281 gcgaaacctc tcgatggagc cgcaggaatt ggaacgaaat ctggtggccg ctgtcgatgg 2341 cctaaccctt gccccgctgt ccagcatctc cagcaaagct cccggatcag ctgccaggcc 2401 agatagctcc gatacggata cggcccatga ttatgcggag atttacacgc catcctgcga 2461 aaagctaccc gcctggatga agaacaatcc ggcattgatg gccagtggcg ggaattccag 2521 caccaccacc acaaccacca gtgaactggg cgtgccacgg cctccgacgc cgccgctgca 2581 tcgctttccc agctgggagg ccaagatcta ccaggtggcc aacgatggac tggcgggagc 2641 tggcggaggg acggcggaga gtgcggccat tcaggagcca gatattcaag agggaacggg 2701 cacgggaacg aatctctcca atggccgacg acatggtcac agtcatggat ctggaacggg 2761 aacggtaacg gcgggaactg gggatgggca cggtaccctg ggcagtacac cgggaacgcc 2821 gctgccaccg tcgaggcaac aacaaaccgc cagcggcggc ttctgtgata tatccgtgcc 2881 cgtctacgca acggtcaagg gtcgagcctc gcagatccgc tcgatgccat ttacgggcga 2941 ttcgagcgat gactccagtg atggcgagga ccatgcggtg atgctcaccc atcattcaca 3001 caactcgtcg agcaccgaga acacggagac ctcgacatcg ggcagcgctt cgagtccctc 3061 gaagagcctg aagacctcct ctagcctaag tccggccaag cgaagtggtt cggagagtcc 3121 caagaacgcg aaggcgcgtg tccacctcca accacgcacc acatccacca gccacaccaa 3181 ccaacagcat ctccaaccgc aatcgttcca tacgcatacg caccaccaac accacacact 3241 gccccaccaa taccaagtcc agaatcataa ccaccagttg ggggcctaca cgctggcgcc 3301 ttcgagtggg cagataacgc tgccgcgtcc ccatggccac gccctccaaa ctccaaccgc 3361 ctccaaagcc ccctcacccc tccagcagca catgcgtggc acagtaattt cagatctctc 3421 ctttgaatca ggcctctcgg acgactacgc cctgcccccc gacgccgtgt cggagtccac 3481 gtgcatggac gcctcgatgc cgtcgctgtt gatgcgacag tcctacgtgg attcgcccag 3541 caaaaagatt gagtcgctgg agaagatggg tcacctggcc aagctgggtg gcaagctgaa 3601 gacttggcgc aagcgttggt tcgttctaaa gaacggatcc ctcaactact ggaagagcca 3661 gcacgatgtg cagcggaagc cccaggggca gatccaactg gacgaggcct gtcgcatcaa 3721 tcgggcggag ggagcctcca ccttcgagat agacacgggc aagaaggtct actacctcac 3781 ggcggactcg catgccacca tggacgattg gatccgggtg ctgcagaatg tgcagcgaag 3841 gaatgccacc aagctgctgc tgagtcgcga tgaccagaag ccgacggtgc agggttgggt 3901 gaccaaggtg aagaacggcc atcccaagaa gtgctggtgt gtgctgttgg gcaagatgtt 3961 cctctacttc aaggctcctg ttgagacgaa tcccctgggc cagattaata tgcgcgatgc 4021 ccgagtcgag gaggtggaac acgtttctga ctcggactcc gaggagcgag aggatgccgc 4081 ccaggatcag gcccgactca cggtggccat ctatccggcg caccagggac caacctacct 4141 gatcctgtcc gggaagccag agcgggataa ttggctctat cacctaactg tcgtttcggg 4201 cggcggccca agtgctggca cccagtatga acagctcgta cagaagctca tggaaacgga 4261 tggcgatcct aactgcgtcc tgtggcgcca tcccattctg ctgcacacca aagacaccat 4321 caccgcgccg ctctcatcaa tgcacacgga aaccatgcag ccggaggcca ttaagctctt 4381 caagagcatt cagctgttca tgtcggtggc ggtcaaccag ccgggcatcg attaccacgt 4441 ggtgctcgcc cagaacgccc tgcaacatgc tctggatatg cccgagctgc agacggagat 4501 gatctgcata ctgatcaagc agacctcccg ccacatgggc cagaagctca gtgtcggcgt 4561 ccaggtaaac aagaagctgg gcaagcaaac gcgccaacta ctgttgtgcg ccacccaaag 4621 cctattcacc tgtgataccc aacaggcggg ccacgcccaa gccaacggca gttcgcccac 4681 ctccatacag gctcctgctg ccacgcccat aatcgactgc aaaagcaacc cgcccgccta 4741 cagcttcgtc cagggctggc agctcctggc cctggccgta tccctctttg ttccgcgctc 4801 gagtcgcctg ctgtggtacc tcaagctcca cttgtcccgg aatgcggata caaagacaga 4861 gacgggcaag tacgccgcct actgtgagcg cgcgctggag aggacgctta agaacggggg 4921 ccgcgagacg aaaccgtcgc ggatggaggt tctatcgatt ctcctgaaga atccctacca 4981 ccactctctg ccgcatgcga ttcccgtgca catgatgaac accacctacc aggtggtttc 5041 ctttgatggc tccaccacca tcgaggagtt ccaggccact ttggcccacg aactgggcac 5101 gcgggatgcc agcaatgggt tctgcctatt cagcgacgat ccaattgaga aggatctgga 5161 gcactacctg gagccgctgg ccaagctgtg cgacgtgatc agcaaatggg agacggcttt 5221 aagggagaag ggatcgggga agtttgagaa ttcgcgggtg atccagctga gctacaagaa 5281 ccgtctctac tggaagcaca ccattaagtg cgagacggac aaggagcgcc tgctgctgtg 5341 ctaccagacc aactcgcaga ttgtccaggg ccgattcccg ctatcccggg agttggcttt 5401 ggagctggcc tcgctgatgt cccagatcga catgggcgac tactcgctgg agaagtcccg 5461 cgacgtgggc gtgggcctga agggtctgga caagttctac ccgtatcgct atagggacgc 5521 tttgggcgcc gagcagctga aggatgtgca ggagctgctg gtctccaagt ggatgctgct 5581 caagggtcgc tccacgctgg actgtgtgcg catttacctc acctgctgcc gcaagtggcc 5641 gtatttcgga gcctgcctgt tccaggcgaa gcccagacag agcccagaat catccatggg 5701 caccacggga gcagccactc cggttgcctg gctggcggtg gccgaggatg ccctcaacgt 5761 actcgagctg tccaccatgg cgccggtggc caggtatcca tacagttcgg tgatgacctt 5821 tggcggctgc caggacgact ttatgctggt ggtttcccac gacgacggca gcggtgagca 5881 aaagctcctg tttgccatga gcaagcccaa gattctggag atcacgctgc tcatagcgga 5941 ctacatgaat gcactgggcc acacggtgcc aggaacgccg cagatgaact cgctgacccg 6001 caacggatcg catcgctcgc tgcgagcctc ccagcgtccg actttggggg ccggcggctc 6061 ggcggtggcc accaccaccg ggttctccac gaacgccacc accacggccc acaacacgct 6121 caattcgcat gcgacgcaca cgctcaactc gaaccactcg cacacgctga gcagctccca 6181 tcacgccggc ggcggcggag gaggaagtca gccgggcaca ctgagctcgg gtcatcatca 6241 tcctcagcac caccaccatc accagcagca gcagcagcac caccagcctg atatactaaa 6301 gagcacgccg gatcatcaga ggatcaagta gattggaact aagattccta atagatcgag 6361 aagatagtag agaagatggg aggatcattg tacatagacg gaggatcgga tcacagctta 6421 acagacatat acgactaaac agatacatat gcaccagcct agtggcaaca aatatacacc 6481 taaagataga aagatagaaa gatataaaga tagatggata gatggatagc ggtagagaga 6541 cgacgtagcg taatcggcct gggttggacc ttcttctcct tgcgcaccac tcactaaagt 6601 tctctttcct aagctaacaa cggtactcgt actctaaatc taaattgtaa acaaaaacag 6661 cagcagcagc aagcatatta tatatatatt ataaatttaa tttttttgaa tagtcctaag 6721 tccacgtacc ccaaaaaatg caagaggtat gtgaagaaga agaaacttaa acgtaaacag 6781 aacatgaatc tcaatgttta gattgttctt gttcttgtct tattattacc tattattaat 6841 attatttttt tgtatttttt ttaaccaaca aacaagcagc cacaatgcaa aacaacctat 6901 aaacacctat agaaacgata tatttgagtg ttctcgctct tcgatgcttt gtaatgaatc 6961 tcaatttgta attgtccctc catgcgcgaa actgcctttt gaatttgtag atgtcggagc 7021 caagaacgag taaaagcgaa aaacaaaaaa gaaatcaagc caaaaacaag caaactagca 7081 ttagcagaaa ccaattgaga aaacaagcaa atattttgta aaggattttt caagcccagt 7141 gcaggacgac catcaaccaa gcatccccat ctacatctag atatttacag tgaagccccg 7201 attcgtacgg ttaactgagg gtcgatttct caatgtcatg ttatggttcc ggttagttaa 7261 ctgtcagaga aaactaattt gaggttaaat ggttcggaag aactaaatcg ttttctcaat 7321 gtgatgttaa tttaacctga aattaacctg aacttaacct gacattgaga aaacggccca 7381 aatacgataa cgcgttctta gcccgttcag tgtctagatg tacaacacaa aaactcactc 7441 accagagctt cagcagaaac cttaaacaca caaatgaagg tagtcaacaa aattcggtag 7501 ataaacacgc cccaattaat tattgcccac ttttttacac ccgcgcccac agaagcatat 7561 atgcattcat atatatacat atagaatata tagaaggcag acggcagaag gtatacatgt 7621 attcggattc gatatttaac aaaattatac acaccaaatt aacgatataa caaacagttt 7681 atacggtaac agcgcatttt tttcctaatt gtaaagattt gatattacaa atttatatgc 7741 gccgagacgc aacgaaaacg aaaatggaaa ttaaacgaga aaacgagaga tcgaacagag 7801 catctcattg ggaagaatcg aagaaaatcg aaggcttgca agtggatata aactatatag 7861 gcgaatgtat cacacatcac actccagtga aacgaaatat atataaaggg aaattaacga 7921 ttaaaactaa accaaaaatg a