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LOCUS XM_017151042 4786 bp mRNA linear INV 09-DEC-2024 X8, mRNA. ACCESSION XM_017151042 VERSION XM_017151042.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151042.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4786 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4786 /gene="sgg" /note="shaggy; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108063823" CDS 738..2459 /gene="sgg" /codon_start=1 /product="protein kinase shaggy isoform X6" /protein_id="XP_017006531.1" /db_xref="GeneID:108063823" /translation="MLINRGSLLEGRDGSKITTVVATPGQGTDRVQEVSYTDTKVIGN GSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCNIVKLLYFFYSSGEK RDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYMYQLFRSLAYIHSLGICHR DIKPQNLLLDPETAVLKLCDFGSAKQLLHGEPNVSYICSRYYRAPELIFGAINYTTKI DVWSAGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQI KSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACAHPFFDELRMEGNHTLPNG REMPPLFNFTEHELSIQPSLVPQLLPKHLQNASGPGGANRSSAGGAASAAASGSTSVS STGSGASAEGSAAQQPQAQGTAAAAAAGSGSGSGSGSGGAAAAGGSGSGNNSSGGGAS GAPSAAVAAGANAAVAGGGGGGGVGAAATAATAAGAMAATNAGGANVTGSQSNSALNS SGSGGSGNGSGNGNGNGEAAVSASGSGGNGGNGGNGGDNDAGDSGAAGSGGSGGGAAE TEAAASG" misc_feature 831..1706 /gene="sgg" /note="The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3; cd14137" /db_xref="CDD:271039" misc_feature order(861..875,885..887,924..926,930..932,963..965, 1005..1007,1071..1082,1089..1091,1095..1100,1218..1220, 1224..1226,1230..1235,1239..1241,1275..1277,1284..1286, 1317..1319,1323..1334,1338..1340,1452..1454) /gene="sgg" /note="active site" /db_xref="CDD:271039" misc_feature order(861..872,885..887,924..926,930..932,1005..1007, 1071..1082,1089..1091,1224..1226,1230..1235,1239..1241, 1275..1277) /gene="sgg" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:271039" misc_feature order(873..878,1311..1337,1359..1364,1455..1469, 1473..1478,1488..1490,1548..1559) /gene="sgg" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(963..965,1095..1097,1218..1220,1224..1226, 1284..1286,1317..1319,1323..1334,1338..1340,1452..1454) /gene="sgg" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(1272..1304,1308..1340) /gene="sgg" /note="activation loop (A-loop); other site" /db_xref="CDD:271039" misc_feature order(1359..1361,1464..1469,1473..1478,1485..1490, 1548..1565) /gene="sgg" /note="axin binding site [polypeptide binding]; other site" /db_xref="CDD:271039" polyA_site 4786 /gene="sgg" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcccgcgtc gctgcccccc cgctgtgctg ctgctgctgc tgagaattta gttttaatcg 61 agattcactc gctgcgagtt cgagttctct gcgctcttcg ctccgcatac ctatacctat 121 acctatacct atacctatac ctatacctat agctcgctaa ataaagctga aactgaagcg 181 aataaaaccg aaggaggagc agaaactgac ggagaaatag acccaaatca aaaccgattc 241 gaaagcacct cagaaaaaag ggcgaactaa gccaagaagg cgaaaacaaa atccaaatca 301 aaatcaaacc aacgtcactt caattttgtt ctgtgccctg tgtgtgtgta tgtgtgtcag 361 tgcctgtgtg tgtgtataag ttactgctgc gctgcagtcg acagcgcagc gactgcgacg 421 ccgatagcgc tgcggaagtt ttcgccaaga aatacaaaaa aaaaaaaaca gaaatataag 481 aaaaggaaaa agcagaaaga gctgaaaaag ctgaaagaaa aaaagaaggt caacagttga 541 aaacttcaac ccaaaagcga acacccaccc accacccact ctcttcgctg ccgacggcga 601 ctgcgactgc agcagcgacg cgacagcggc gtcggcgtcc agcgcttttc cgcttttccc 661 gttcccgttc ttcgcttctc ttcaattcaa tccaattcaa ttcaacagcg cttttccgtt 721 cgccaatctc atcgagcatg ttgatcaacc gcggctccct actcgaaggt cgcgatggtt 781 ctaaaatcac aacagttgtt gcaacacccg gccaaggcac cgatcgcgta caagaggtct 841 cctatacaga cacaaaggtc atcggcaatg gcagcttcgg cgtcgtgttc caggcaaagc 901 tctgcgatac cggcgagctg gtggcaatca aaaaagtttt acaagacaga cgatttaaga 961 atcgcgaatt gcaaattatg cgcaaattgg agcattgtaa tattgtaaag cttttgtact 1021 ttttctattc gagcggtgaa aagcgtgatg aagtattttt gaatttagtc ctcgaatata 1081 taccagaaac cgtatacaaa gtggctcgcc aatatgccaa aaccaagcaa acgataccaa 1141 tcaactttat tcggctctac atgtatcaac tgtttagaag tttggcctac atccactcgc 1201 tgggcatttg ccatcgtgat atcaagccgc agaaccttct gctcgatcct gagacggctg 1261 tgctgaagct ctgtgacttt ggcagtgcca agcagctgct gcacggcgag ccgaacgtgt 1321 cgtatatctg ctcccggtat taccgcgccc ccgagctcat ctttggcgcc atcaattata 1381 caacaaagat cgacgtatgg agtgccggtt gcgttttggc cgagctactg ctgggccagc 1441 ccatcttccc tggcgactcc ggtgtcgatc agcttgtcga ggtcatcaag gtcctgggca 1501 caccgacaag agaacagata cgcgagatga atccaaacta cacggaattc aagttcccac 1561 aaattaagag tcatccatgg cagaaagttt tccgtatacg cactcctaca gaagctatca 1621 acttggtgtc cctgctgctc gagtacacgc ccagtgcccg gatcacaccg ctcaaggcct 1681 gtgcacatcc gttcttcgac gagctgcgca tggagggcaa ccacaccttg cccaacggtc 1741 gcgagatgcc gccgctattc aacttcacag agcatgaact ctcgatacag cccagcctag 1801 tgccacaatt gttgcccaag catctgcaga atgcctccgg cccaggcggc gccaaccgat 1861 cctcagccgg cggagcagcc tctgctgcgg ccagcggctc caccagcgtc tcgtccacag 1921 gcagtggcgc ctcggcggaa ggatccgccg cccagcagcc gcaggcgcag ggcacagcag 1981 cagcagcagc tgcgggatcc ggatcgggat cgggatcggg atcaggcgga gcagcagcag 2041 ccggcggatc aggatccggc aacaacagca gcggaggcgg agcatccgga gcgccgtctg 2101 ccgccgtggc agctggtgcc aatgccgcgg tagccggcgg aggcggcggt ggcggagtcg 2161 gtgcggcggc cactgctgcc acagcagctg gcgctatggc cgcgaccaat gccggcggcg 2221 ccaatgtgac aggttctcag tcgaacagcg ccctcaacag cagcggaagt ggcggcagtg 2281 gaaatggcag cggaaacgga aatggaaacg gagaggcagc tgtctcggca tcgggatcgg 2341 gtggaaacgg tggaaatgga ggaaacggcg gggacaacga cgctggcgac agtggagctg 2401 caggatccgg aggatctgga ggaggagcag ctgagaccga ggcagcggcg tcgggttagc 2461 gcgagtcagg aggtgctctc ttttaatgta atgttattca caggattttc gcttgggcca 2521 gggattaagt taccattacc atttttggcc cagacccaca cacacacaca cagttacact 2581 cgatggaaac agaagagata gaatgagaag agaagtccca gcaaaagcta agagaaaatg 2641 atagacaaag gaattcaaat tctgattcag attcactcca caaaacacca cccacccaat 2701 acactcacac ccactcacac accccagctc cagcacacac acacatgtat gtatgtatat 2761 ctagctatat gcattgggcg caagcaaata tttagcataa aactcgaaag aaagaaaaaa 2821 caaaagaatc cactttaaac tatgcataaa taatttaaat aataatctgt attattgaca 2881 cgggacaagc ccgtaaggat gttgaaaaat aataatcggt aaaagaaaaa gaaaaacccc 2941 cctccaatat agaaaataac atttaacaaa tagctcgcga aacgtaataa aacttaagtc 3001 aaagatgaga aatggaaaac aaaccacaag agaaatgagg aaatacttag tgaaataaat 3061 caaaattttt gccccattta acgtttatat atatgcgatt atacaaatat ataacgatca 3121 cagcagttag caatccatag taaaagtaaa aatgagaaac aaaaacaaaa ataaaaataa 3181 aaggcggcaa agtgagaact agcaaaaagg agatgatata acatttacta aactcgcgca 3241 agtgcatcta tataaatacg atatatagat attatataaa catagatata tatacgagat 3301 attaaagaga cattcgtaat cctagtagca acccccgatc ccccaatccc gaccccaatg 3361 aaccggaaaa tgccgaggta tttccgtgca acattttccg tggcctgttc tcaagtgacg 3421 acgtttagga actacgatta tctaaggagg cggtcgtcga aatgcaatat acactaacac 3481 taaacactat acataaatac atgaatacaa aggttataac aaattgagca aaacgtaaat 3541 gaatgtgtaa tgaatgagta aaacgctttt agcgcgcgac gccacccatt aacttaaatt 3601 aacaatgcaa ataatacata atacaagagg taatgagtaa tgagacgatg atgatgagat 3661 agtaaagcct aaagccagga tcttgatata tgtaaaagta atcgacaaag aacaaacaac 3721 atttagctgc aattgaaaat ttaaacttat ttaatacaaa ttgaagtaaa cgtaaacgta 3781 aaagtaaaag taaaatacaa tgaaaccgaa accgaaaccg atgatggttt tagaatgtaa 3841 ggccttagat caaccggaaa ctcctgcgcg actatagtac tacccctcgc cctctccctc 3901 gcctcggttc gattggttcg aatctctatc tctataccta tgaaacccaa aaacccaaaa 3961 accgaaaacc caaaaaccac ccacttaaac tgcttagatc tcgttttgat tatgcgatct 4021 gcgattatgt ccaagcactt taagcccatt aaaactaaaa ccaactaagt aaacaaagga 4081 aaacataaag aaaaccaaaa agaaaaagga aagcaagtct atttgtatgt atttccatag 4141 aactccttat atattatatg agaacatatt tttttttact aactaaatga tacatttata 4201 caattaatga acgttgagtt ttgtggcatc aaaactaaat aaatttaact atatacatat 4261 atgtacacac ccacacacaa gaacacacac taacattcag acattttcac acgcacatag 4321 ctctataatt tcaagtaaat ttttaaaacc caagattacc caactaattt ccccaaaaca 4381 ttttggtaaa taatctaaga aggcggcaaa caagttatat aaacccaaac ccccaaaaga 4441 caccccacac acacgcgatg tttgatttgt aattaaaaat ttgaacagaa gaatggaaaa 4501 ataaagccca aaacaatata tatacacaca tatatatgca tagaaaaaca tacttatata 4561 tgatgaacaa cttcagcgtt tcgctttaat tatgaggcaa caaccacatg agaaatccaa 4621 accaaactta aacttaatta acttaaacac aaacctaaac taattgcaaa aataacaaat 4681 ggcaaaacca aattgaaaga ggaagtgaaa atgaaaataa aacacgagac aaatgcgtaa 4741 agaaaacatt aatttaaaaa caataaaaat tacaaacaaa aatata