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LOCUS XM_017151039 4778 bp mRNA linear INV 09-DEC-2024 X6, mRNA. ACCESSION XM_017151039 VERSION XM_017151039.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151039.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4778 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4778 /gene="sgg" /note="shaggy; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108063823" CDS 676..2451 /gene="sgg" /codon_start=1 /product="protein kinase shaggy isoform X5" /protein_id="XP_017006528.1" /db_xref="GeneID:108063823" /translation="MSGRPRTSSFAEGNKQSPSLVLGGVKTCSRDGSKITTVVATPGQ GTDRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKL EHCNIVKLLYFFYSSGEKRDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYM YQLFRSLAYIHSLGICHRDIKPQNLLLDPETAVLKLCDFGSAKQLLHGEPNVSYICSR YYRAPELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTR EQIREMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACA HPFFDELRMEGNHTLPNGREMPPLFNFTEHELSIQPSLVPQLLPKHLQNASGPGGANR SSAGGAASAAASGSTSVSSTGSGASAEGSAAQQPQAQGTAAAAAAGSGSGSGSGSGGA AAAGGSGSGNNSSGGGASGAPSAAVAAGANAAVAGGGGGGGVGAAATAATAAGAMAAT NAGGANVTGSQSNSALNSSGSGGSGNGSGNGNGNGEAAVSASGSGGNGGNGGNGGDND AGDSGAAGSGGSGGGAAETEAAASG" misc_feature 823..1698 /gene="sgg" /note="The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3; cd14137" /db_xref="CDD:271039" misc_feature order(853..867,877..879,916..918,922..924,955..957, 997..999,1063..1074,1081..1083,1087..1092,1210..1212, 1216..1218,1222..1227,1231..1233,1267..1269,1276..1278, 1309..1311,1315..1326,1330..1332,1444..1446) /gene="sgg" /note="active site" /db_xref="CDD:271039" misc_feature order(853..864,877..879,916..918,922..924,997..999, 1063..1074,1081..1083,1216..1218,1222..1227,1231..1233, 1267..1269) /gene="sgg" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:271039" misc_feature order(865..870,1303..1329,1351..1356,1447..1461, 1465..1470,1480..1482,1540..1551) /gene="sgg" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(955..957,1087..1089,1210..1212,1216..1218, 1276..1278,1309..1311,1315..1326,1330..1332,1444..1446) /gene="sgg" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(1264..1296,1300..1332) /gene="sgg" /note="activation loop (A-loop); other site" /db_xref="CDD:271039" misc_feature order(1351..1353,1456..1461,1465..1470,1477..1482, 1540..1557) /gene="sgg" /note="axin binding site [polypeptide binding]; other site" /db_xref="CDD:271039" polyA_site 4778 /gene="sgg" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tacttaacag tcggactaaa aaaatataca gatcttttgt tgtaagtaaa aaagaaaact 61 caagaagtaa aatagaaaca atttggcgac taacgcagct ccagaaagtg ccaaaaagca 121 acaaaaagtg ccccaacata cggcagttct gccccatttt cgccccacac tttttttgtg 181 cgaagcgagt gtgaaagcca ttgaaaagtt gcaattgttg agagcccttg acgagtttgt 241 gttttaacag aaagagaaaa ggaaaatata aactaaagaa cgaaggaaac aaggagattg 301 attgcttgaa aaacactttg gaaaacactg ctgcatgcca atggccttgc agtgcagtaa 361 aaaacagcag cagtcgaaga agaagctgta gaacgttgtt cgttgttttt ttccccaaac 421 ccactggttt ttttcgtagt ggaaacataa gcttgcattg taagagcacc gcgaacgagc 481 aggagccaca gttccatttc catttccccc gtcaagaaac aataatcgaa gcaaacaaat 541 aattaattga cataattaat tcagaaccaa tcacggacca aaacaacagc agaagcggca 601 aataaaaaca aagggtttac agtcgaagaa gccgaagaag cagtcaagaa gtcgaggaac 661 tgaagcagcg tcacgatgag cggtcgtcca agaacttcct ccttcgccga gggcaacaaa 721 cagtcgccga gtttggtgct gggcggcgtc aaaacatgca gtcgcgatgg ttctaaaatc 781 acaacagttg ttgcaacacc cggccaaggc accgatcgcg tacaagaggt ctcctataca 841 gacacaaagg tcatcggcaa tggcagcttc ggcgtcgtgt tccaggcaaa gctctgcgat 901 accggcgagc tggtggcaat caaaaaagtt ttacaagaca gacgatttaa gaatcgcgaa 961 ttgcaaatta tgcgcaaatt ggagcattgt aatattgtaa agcttttgta ctttttctat 1021 tcgagcggtg aaaagcgtga tgaagtattt ttgaatttag tcctcgaata tataccagaa 1081 accgtataca aagtggctcg ccaatatgcc aaaaccaagc aaacgatacc aatcaacttt 1141 attcggctct acatgtatca actgtttaga agtttggcct acatccactc gctgggcatt 1201 tgccatcgtg atatcaagcc gcagaacctt ctgctcgatc ctgagacggc tgtgctgaag 1261 ctctgtgact ttggcagtgc caagcagctg ctgcacggcg agccgaacgt gtcgtatatc 1321 tgctcccggt attaccgcgc ccccgagctc atctttggcg ccatcaatta tacaacaaag 1381 atcgacgtat ggagtgccgg ttgcgttttg gccgagctac tgctgggcca gcccatcttc 1441 cctggcgact ccggtgtcga tcagcttgtc gaggtcatca aggtcctggg cacaccgaca 1501 agagaacaga tacgcgagat gaatccaaac tacacggaat tcaagttccc acaaattaag 1561 agtcatccat ggcagaaagt tttccgtata cgcactccta cagaagctat caacttggtg 1621 tccctgctgc tcgagtacac gcccagtgcc cggatcacac cgctcaaggc ctgtgcacat 1681 ccgttcttcg acgagctgcg catggagggc aaccacacct tgcccaacgg tcgcgagatg 1741 ccgccgctat tcaacttcac agagcatgaa ctctcgatac agcccagcct agtgccacaa 1801 ttgttgccca agcatctgca gaatgcctcc ggcccaggcg gcgccaaccg atcctcagcc 1861 ggcggagcag cctctgctgc ggccagcggc tccaccagcg tctcgtccac aggcagtggc 1921 gcctcggcgg aaggatccgc cgcccagcag ccgcaggcgc agggcacagc agcagcagca 1981 gctgcgggat ccggatcggg atcgggatcg ggatcaggcg gagcagcagc agccggcgga 2041 tcaggatccg gcaacaacag cagcggaggc ggagcatccg gagcgccgtc tgccgccgtg 2101 gcagctggtg ccaatgccgc ggtagccggc ggaggcggcg gtggcggagt cggtgcggcg 2161 gccactgctg ccacagcagc tggcgctatg gccgcgacca atgccggcgg cgccaatgtg 2221 acaggttctc agtcgaacag cgccctcaac agcagcggaa gtggcggcag tggaaatggc 2281 agcggaaacg gaaatggaaa cggagaggca gctgtctcgg catcgggatc gggtggaaac 2341 ggtggaaatg gaggaaacgg cggggacaac gacgctggcg acagtggagc tgcaggatcc 2401 ggaggatctg gaggaggagc agctgagacc gaggcagcgg cgtcgggtta gcgcgagtca 2461 ggaggtgctc tcttttaatg taatgttatt cacaggattt tcgcttgggc cagggattaa 2521 gttaccatta ccatttttgg cccagaccca cacacacaca cacagttaca ctcgatggaa 2581 acagaagaga tagaatgaga agagaagtcc cagcaaaagc taagagaaaa tgatagacaa 2641 aggaattcaa attctgattc agattcactc cacaaaacac cacccaccca atacactcac 2701 acccactcac acaccccagc tccagcacac acacacatgt atgtatgtat atctagctat 2761 atgcattggg cgcaagcaaa tatttagcat aaaactcgaa agaaagaaaa aacaaaagaa 2821 tccactttaa actatgcata aataatttaa ataataatct gtattattga cacgggacaa 2881 gcccgtaagg atgttgaaaa ataataatcg gtaaaagaaa aagaaaaacc cccctccaat 2941 atagaaaata acatttaaca aatagctcgc gaaacgtaat aaaacttaag tcaaagatga 3001 gaaatggaaa acaaaccaca agagaaatga ggaaatactt agtgaaataa atcaaaattt 3061 ttgccccatt taacgtttat atatatgcga ttatacaaat atataacgat cacagcagtt 3121 agcaatccat agtaaaagta aaaatgagaa acaaaaacaa aaataaaaat aaaaggcggc 3181 aaagtgagaa ctagcaaaaa ggagatgata taacatttac taaactcgcg caagtgcatc 3241 tatataaata cgatatatag atattatata aacatagata tatatacgag atattaaaga 3301 gacattcgta atcctagtag caacccccga tcccccaatc ccgaccccaa tgaaccggaa 3361 aatgccgagg tatttccgtg caacattttc cgtggcctgt tctcaagtga cgacgtttag 3421 gaactacgat tatctaagga ggcggtcgtc gaaatgcaat atacactaac actaaacact 3481 atacataaat acatgaatac aaaggttata acaaattgag caaaacgtaa atgaatgtgt 3541 aatgaatgag taaaacgctt ttagcgcgcg acgccaccca ttaacttaaa ttaacaatgc 3601 aaataataca taatacaaga ggtaatgagt aatgagacga tgatgatgag atagtaaagc 3661 ctaaagccag gatcttgata tatgtaaaag taatcgacaa agaacaaaca acatttagct 3721 gcaattgaaa atttaaactt atttaataca aattgaagta aacgtaaacg taaaagtaaa 3781 agtaaaatac aatgaaaccg aaaccgaaac cgatgatggt tttagaatgt aaggccttag 3841 atcaaccgga aactcctgcg cgactatagt actacccctc gccctctccc tcgcctcggt 3901 tcgattggtt cgaatctcta tctctatacc tatgaaaccc aaaaacccaa aaaccgaaaa 3961 cccaaaaacc acccacttaa actgcttaga tctcgttttg attatgcgat ctgcgattat 4021 gtccaagcac tttaagccca ttaaaactaa aaccaactaa gtaaacaaag gaaaacataa 4081 agaaaaccaa aaagaaaaag gaaagcaagt ctatttgtat gtatttccat agaactcctt 4141 atatattata tgagaacata ttttttttta ctaactaaat gatacattta tacaattaat 4201 gaacgttgag ttttgtggca tcaaaactaa ataaatttaa ctatatacat atatgtacac 4261 acccacacac aagaacacac actaacattc agacattttc acacgcacat agctctataa 4321 tttcaagtaa atttttaaaa cccaagatta cccaactaat ttccccaaaa cattttggta 4381 aataatctaa gaaggcggca aacaagttat ataaacccaa acccccaaaa gacaccccac 4441 acacacgcga tgtttgattt gtaattaaaa atttgaacag aagaatggaa aaataaagcc 4501 caaaacaata tatatacaca catatatatg catagaaaaa catacttata tatgatgaac 4561 aacttcagcg tttcgcttta attatgaggc aacaaccaca tgagaaatcc aaaccaaact 4621 taaacttaat taacttaaac acaaacctaa actaattgca aaaataacaa atggcaaaac 4681 caaattgaaa gaggaagtga aaatgaaaat aaaacacgag acaaatgcgt aaagaaaaca 4741 ttaatttaaa aacaataaaa attacaaaca aaaatata