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LOCUS XM_017151037 5805 bp mRNA linear INV 09-DEC-2024 X3, mRNA. ACCESSION XM_017151037 VERSION XM_017151037.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151037.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5805 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5805 /gene="sgg" /note="shaggy; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:108063823" CDS 392..3562 /gene="sgg" /codon_start=1 /product="uncharacterized protein sgg isoform X3" /protein_id="XP_017006526.2" /db_xref="GeneID:108063823" /translation="MATTTATTQAAGAAPALNLLPASSNNNLNNALNISNNNNNNNNN SVVISQPIKIPLTERFSSQTSTGSADSGVIVSSASQQQLQLPPPRSSSGSLSLPQAPP GGKWRQQQQRQQLLLSQDSGIENGGGPTKAKDHRHQGVGLKGKPNHHAISSKESGESS ESLGSNCSETQDHRDPQNPQQRIRASSALELSSVDNPQSTVVGSLRSRIKYKSTNSTG TQGFDVEDRIDEVEICDDDCDDEEEIEEEEEDDGVNVDDDNDNQSDSQSGIIINLKSK TTEQQVADSEGAKEVDDRSKNRLLPPDQAELTVAAALARRRDAKSLATDGHIYFPLLK ISEDPHIDAKLINRKDGLQDTMYYLDEFGSPKLREKFARKQKQLLAKQQKQMMKRERR SEEQRKKRNTTVASNLAASGGVPDDDVDETKDDYNTTNRKQKPHCDTSSRSKHNSEPH PHNNPHHNHNNIDVEEEDSLVDSGAVKMRRHSHDNHYDRIIPQSNATTTTTRPKNDHH PQAPQDTEDIDIEQGAEPPELEDADSDESGENVKTAKLARTQSCVSWTKVVQKFKNIL GRDGSKITTVVATPGQGTDRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVL QDRRFKNRELQIMRKLEHCNIVKLLYFFYSSGEKRDEVFLNLVLEYIPETVYKVARQY AKTKQTIPINFIRLYMYQLFRSLAYIHSLGICHRDIKPQNLLLDPETAVLKLCDFGSA KQLLHGEPNVSYICSRYYRAPELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSG VDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLL LEYTPSARITPLKACAHPFFDELRMEGNHTLPNGREMPPLFNFTEHELSIQPSLVPQL LPKHLQNASGPGGANRSSAGGAASAAASGSTSVSSTGSGASAEGSAAQQPQAQGTAAA AAAGSGSGSGSGSGGAAAAGGSGSGNNSSGGGASGAPSAAVAAGANAAVAGGGGGGGV GAAATAATAAGAMAATNAGGANVTDS" misc_feature 2153..3028 /gene="sgg" /note="The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3; cd14137" /db_xref="CDD:271039" misc_feature order(2183..2197,2207..2209,2246..2248,2252..2254, 2285..2287,2327..2329,2393..2404,2411..2413,2417..2422, 2540..2542,2546..2548,2552..2557,2561..2563,2597..2599, 2606..2608,2639..2641,2645..2656,2660..2662,2774..2776) /gene="sgg" /note="active site" /db_xref="CDD:271039" misc_feature order(2183..2194,2207..2209,2246..2248,2252..2254, 2327..2329,2393..2404,2411..2413,2546..2548,2552..2557, 2561..2563,2597..2599) /gene="sgg" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:271039" misc_feature order(2195..2200,2633..2659,2681..2686,2777..2791, 2795..2800,2810..2812,2870..2881) /gene="sgg" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(2285..2287,2417..2419,2540..2542,2546..2548, 2606..2608,2639..2641,2645..2656,2660..2662,2774..2776) /gene="sgg" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(2594..2626,2630..2662) /gene="sgg" /note="activation loop (A-loop); other site" /db_xref="CDD:271039" misc_feature order(2681..2683,2786..2791,2795..2800,2807..2812, 2870..2887) /gene="sgg" /note="axin binding site [polypeptide binding]; other site" /db_xref="CDD:271039" polyA_site 5805 /gene="sgg" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgaatccatc gagcaggcgc gtcgtactct cctctcgttc cgccgcgttc cattcaccca 61 ttccgccatc cgcgactcta ttcacttgtt gtatttgtac ttttatcagc gactaaaaag 121 aaacgaatcg aaataaatgt aaataacaac ggcgaaacaa aagtgaaaca aattcgtgac 181 gcgcctgatt acttctttat tttttgtgtc aacagtgtgt gcagtgcaat gtgactgtga 241 agcgccaaca caagcaacga aaaaaaaaca aataaataaa aaaaaacttt agtgagtgat 301 ttcaaacact acaaactaga aagtacactt taaaaaacct tacaagaaat actctaacgc 361 ctagagtatt taacggacca ttagaaacct gatggcaaca acaacggcaa caacgcaggc 421 agcaggagct gcaccagctc tcaatttatt gcccgccagc agcaacaata atctaaataa 481 tgcactaaac attagcaaca ataataacaa caacaacaac aacagcgtcg tgataagcca 541 gccgattaaa ataccgctga ccgagcgctt ctcatcgcaa acatcgacgg gttcggcgga 601 cagtggcgtg attgtttcca gtgcatcgca gcagcaactg cagttgccgc caccgcgcag 661 cagcagtggc tccctgagct tgccacaggc gccacctggc ggcaagtggc ggcagcagca 721 gcagcgccag cagctgctac tcagtcaaga tagcggcatc gagaacggtg gtggtcccac 781 gaaggcgaaa gatcatcgtc atcagggagt gggattgaag ggaaagccga accatcatgc 841 cataagttcc aaggagagcg gcgagagcag cgagagcctg ggcagcaatt gctcagagac 901 ccaggatcat cgggatccgc agaatcccca gcagaggatc agggcctcct ccgccctgga 961 gctcagtagc gtcgacaatc ctcaatccac cgtggtgggc agcctgcgca gccgcatcaa 1021 gtacaagagc accaatagca ccggaaccca gggattcgat gtcgaggatc gcatcgatga 1081 ggtcgagatc tgtgatgatg actgcgatga tgaggaggaa atcgaggaag aggaggagga 1141 cgatggtgtc aatgtggacg acgacaacga caaccagtcg gacagtcagt cgggtattat 1201 aatcaacctg aagagcaaga caaccgaaca acaggtggcg gatagtgagg gggctaagga 1261 ggtggatgat agatccaaga accgactact accgcccgat caggcggaac taacggtggc 1321 cgctgccttg gcccgtcgtc gcgacgccaa gagcctggcc accgacggac acatctactt 1381 cccgctgctc aagatcagcg aggatccgca catcgatgcc aagctgatca accgcaagga 1441 cggcctccag gacacgatgt actatctcga tgagttcggg agtcccaagc tgcgggagaa 1501 gttcgcccgc aagcagaagc agctgctcgc caagcagcag aagcagatga tgaagcgcga 1561 aaggaggagc gaggagcagc gcaagaagcg caacaccacg gtggcctcca atctggcggc 1621 cagcggagga gttccagacg atgacgttga cgagaccaaa gatgattata atacaacaaa 1681 taggaaacaa aaaccacact gtgatactag ctctaggagc aaacataact cggaacccca 1741 tccccataac aatcctcatc ataatcataa taatatcgat gtggaggagg aggacagcct 1801 cgtggacagt ggagcggtca agatgcgccg ccacagccac gacaaccact acgatagaat 1861 catcccccag agcaacgcaa ccaccaccac cacccgccct aagaacgatc atcatcctca 1921 ggcgccgcag gacaccgagg atatcgatat cgagcaagga gccgaacccc ccgagctcga 1981 ggatgcggat agcgatgaga gcggcgagaa cgttaagact gccaaattgg ccagaactca 2041 gtcctgcgtc agttggacca aagtggtgca aaagttcaaa aatatactag gtcgcgatgg 2101 ttctaaaatc acaacagttg ttgcaacacc cggccaaggc accgatcgcg tacaagaggt 2161 ctcctataca gacacaaagg tcatcggcaa tggcagcttc ggcgtcgtgt tccaggcaaa 2221 gctctgcgat accggcgagc tggtggcaat caaaaaagtt ttacaagaca gacgatttaa 2281 gaatcgcgaa ttgcaaatta tgcgcaaatt ggagcattgt aatattgtaa agcttttgta 2341 ctttttctat tcgagcggtg aaaagcgtga tgaagtattt ttgaatttag tcctcgaata 2401 tataccagaa accgtataca aagtggctcg ccaatatgcc aaaaccaagc aaacgatacc 2461 aatcaacttt attcggctct acatgtatca actgtttaga agtttggcct acatccactc 2521 gctgggcatt tgccatcgtg atatcaagcc gcagaacctt ctgctcgatc ctgagacggc 2581 tgtgctgaag ctctgtgact ttggcagtgc caagcagctg ctgcacggcg agccgaacgt 2641 gtcgtatatc tgctcccggt attaccgcgc ccccgagctc atctttggcg ccatcaatta 2701 tacaacaaag atcgacgtat ggagtgccgg ttgcgttttg gccgagctac tgctgggcca 2761 gcccatcttc cctggcgact ccggtgtcga tcagcttgtc gaggtcatca aggtcctggg 2821 cacaccgaca agagaacaga tacgcgagat gaatccaaac tacacggaat tcaagttccc 2881 acaaattaag agtcatccat ggcagaaagt tttccgtata cgcactccta cagaagctat 2941 caacttggtg tccctgctgc tcgagtacac gcccagtgcc cggatcacac cgctcaaggc 3001 ctgtgcacat ccgttcttcg acgagctgcg catggagggc aaccacacct tgcccaacgg 3061 tcgcgagatg ccgccgctat tcaacttcac agagcatgaa ctctcgatac agcccagcct 3121 agtgccacaa ttgttgccca agcatctgca gaatgcctcc ggcccaggcg gcgccaaccg 3181 atcctcagcc ggcggagcag cctctgctgc ggccagcggc tccaccagcg tctcgtccac 3241 aggcagtggc gcctcggcgg aaggatccgc cgcccagcag ccgcaggcgc agggcacagc 3301 agcagcagca gctgcgggat ccggatcggg atcgggatcg ggatcaggcg gagcagcagc 3361 agccggcgga tcaggatccg gcaacaacag cagcggaggc ggagcatccg gagcgccgtc 3421 tgccgccgtg gcagctggtg ccaatgccgc ggtagccggc ggaggcggcg gtggcggagt 3481 cggtgcggcg gccactgctg ccacagcagc tggcgctatg gccgcgacca atgccggcgg 3541 cgccaatgtg acagattcat aggggcaata gtaacataca tacacacact tatatatatc 3601 cacgcatata tatatagtaa taaatatata taaaacctac accaacaaca acaagaacag 3661 aacagcaaac gcatatataa taaatataaa aaacaaacaa ataagaacgg agaatgcaaa 3721 accagcagca acaaaaaatt aaaccaacaa caacctatat acacaataat tactaaattt 3781 aatttatgca attgatgatg atgaaaaaaa agcaaaaagc aaatagcaac aacaaaaata 3841 cacatacgaa agaagaatag cagcgaaaaa gctgagagaa agcaaaaaat atataacaaa 3901 ggaaacattt tacttaggta aaaattaaat ttattttaaa tctaaaataa aactaaaaac 3961 taataagcat aataataaat aataataatg gtaaataaaa acacacaata attataatag 4021 taaagcgctg atcgattgtc attttgtcac taatgagtgg cgatatatat cttttaatta 4081 atacctatta ttataaatat tctctgcttc ctcccctccc ctctctcact ctcttcgtta 4141 aatatgatta tgattatgat atccattctc ttttgacaaa aacaaaaagc ctaaagaaat 4201 aactatgtat atgtatattg aacagagtca ttgcatattt ttttatacca ccttgtttta 4261 gtatgtttaa ctgataagga aaggagccag gaaaagagga gaagaaacaa tatatctata 4321 aataataatc caataaagcg agaaagcgag ttttgtgtag taaaagctaa gatctaaaca 4381 aaacagcgga catttaaatg gatttttgca cattagacta gctaatgcaa aaacatagat 4441 acaccacaca ctcacacgac cttaaaaacg gaagaggaga tgataaggaa gataaggagg 4501 aggagaaaag gagaaggaaa aacaaaacaa agccgcgagc ataatgttaa tgttatgtta 4561 taccttaatt taatggaaat gattaacaaa aatacaaaaa acgaaaacaa aaacaaaaac 4621 aaaaaaacaa ccgcaagcaa caaacaaaac tgtttaaact atacatatat ataatatata 4681 atccttatga atataaacaa tacttttttt ttgcaacacg cattatgtat acatacatat 4741 tgaataaata aattattttt atttttatta aataattatt attattattt tgtaataaat 4801 aaaagcaaat aatcgattga taaccgacaa caagaaaagt ggaagttagg aaccccccga 4861 tcgtacgata tatatttttt tttgcgcccc taaaatatat atgtacagat atatctaaat 4921 gtatgtactc ttatttagcc agtagtcgag agagagagag ttaggatgag ttatggccga 4981 gagatttcgg atgtaggcta taacgacagg aagcagaacc cagaatacag aatacagaac 5041 acaggcatga aaatggaagc tgatagctga taagccgata agctggcatc tgagaacccc 5101 gacggcttag ttgcaatatg tagataaggt ccaattaccg ggtttccttc cgtaactctg 5161 tagccgtaga gctgcattat tatttgcata catagtcagt gtcaccttgc ctcgcccccg 5221 ccccaaaaat ttcctcactt tccccacttc tttccaaacg gagctgctat taaatactat 5281 tactttcttt tgtccgaatg gcatagcagt aaaaacctaa aaattaaaca aaaattgcat 5341 aagcgagaat agagagaaaa ataagcagaa cacttatatt tatttctata gtttaccata 5401 atcgacctta aactaattat tattctaatt ataaatgatt aatggataca cacacacaca 5461 cacgcagaat aaaatacatt tttcctagta atttaggcac acaaataaat aaataacaag 5521 aaaacatcta aaaaaaaatc ctaaaaaata aataaaaaag atcaaaaaat taaacacatt 5581 atcttattct taaatttgct agttacacac cagaaacaca cagacacgta catacgcata 5641 ctctgacaac tgtatatgta atgctgtaat aatcatgata atatatagat tcgttgatga 5701 taatgcaaat gagcaaagaa gccgtaatga taatgataat aaatgaatac gacaaaatcc 5761 aacaaataaa aagagaaaca aatacaatat ttaaacgaaa gtaaa