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LOCUS XM_017151034 6109 bp mRNA linear INV 09-DEC-2024 X1, mRNA. ACCESSION XM_017151034 VERSION XM_017151034.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017151034.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6109 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6109 /gene="sgg" /note="shaggy; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108063823" CDS 393..3782 /gene="sgg" /codon_start=1 /product="uncharacterized protein sgg isoform X1" /protein_id="XP_017006523.2" /db_xref="GeneID:108063823" /translation="MATTTATTQAAGAAPALNLLPASSNNNLNNALNISNNNNNNNNN SVVISQPIKIPLTERFSSQTSTGSADSGVIVSSASQQQLQLPPPRSSSGSLSLPQAPP GGKWRQQQQRQQLLLSQDSGIENGGGPTKAKDHRHQGVGLKGKPNHHAISSKESGESS ESLGSNCSETQDHRDPQNPQQRIRASSALELSSVDNPQSTVVGSLRSRIKYKSTNSTG TQGFDVEDRIDEVEICDDDCDDEEEIEEEEEDDGVNVDDDNDNQSDSQSGIIINLKSK TTEQQVADSEGAKEVDDRSKNRLLPPDQAELTVAAALARRRDAKSLATDGHIYFPLLK ISEDPHIDAKLINRKDGLQDTMYYLDEFGSPKLREKFARKQKQLLAKQQKQMMKRERR SEEQRKKRNTTVASNLAASGGVPDDDVDETKDDYNTTNRKQKPHCDTSSRSKHNSEPH PHNNPHHNHNNIDVEEEDSLVDSGAVKMRRHSHDNHYDRIIPQSNATTTTTRPKNDHH PQAPQDTEDIDIEQGAEPPELEDADSDESGENVKTAKLARTQSCVSWTKVVQKFKNIL GRDGSKITTVVATPGQGTDRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVL QDRRFKNRELQIMRKLEHCNIVKLLYFFYSSGEKRDEVFLNLVLEYIPETVYKVARQY AKTKQTIPINFIRLYMYQLFRSLAYIHSLGICHRDIKPQNLLLDPETAVLKLCDFGSA KQLLHGEPNVSYICSRYYRAPELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSG VDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLL LEYTPSARITPLKACAHPFFDELRMEGNHTLPNGREMPPLFNFTEHELSIQPSLVPQL LPKHLQNASGPGGANRSSAGGAASAAASGSTSVSSTGSGASAEGSAAQQPQAQGTAAA AAAGSGSGSGSGSGGAAAAGGSGSGNNSSGGGASGAPSAAVAAGANAAVAGGGGGGGV GAAATAATAAGAMAATNAGGANVTGSQSNSALNSSGSGGSGNGSGNGNGNGEAAVSAS GSGGNGGNGGNGGDNDAGDSGAAGSGGSGGGAAETEAAASG" misc_feature 2154..3029 /gene="sgg" /note="The catalytic domain of the Serine/Threonine Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3; cd14137" /db_xref="CDD:271039" misc_feature order(2184..2198,2208..2210,2247..2249,2253..2255, 2286..2288,2328..2330,2394..2405,2412..2414,2418..2423, 2541..2543,2547..2549,2553..2558,2562..2564,2598..2600, 2607..2609,2640..2642,2646..2657,2661..2663,2775..2777) /gene="sgg" /note="active site" /db_xref="CDD:271039" misc_feature order(2184..2195,2208..2210,2247..2249,2253..2255, 2328..2330,2394..2405,2412..2414,2547..2549,2553..2558, 2562..2564,2598..2600) /gene="sgg" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:271039" misc_feature order(2196..2201,2634..2660,2682..2687,2778..2792, 2796..2801,2811..2813,2871..2882) /gene="sgg" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(2286..2288,2418..2420,2541..2543,2547..2549, 2607..2609,2640..2642,2646..2657,2661..2663,2775..2777) /gene="sgg" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:271039" misc_feature order(2595..2627,2631..2663) /gene="sgg" /note="activation loop (A-loop); other site" /db_xref="CDD:271039" misc_feature order(2682..2684,2787..2792,2796..2801,2808..2813, 2871..2888) /gene="sgg" /note="axin binding site [polypeptide binding]; other site" /db_xref="CDD:271039" polyA_site 6109 /gene="sgg" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgaatccat cgagcaggcg cgtcgtactc tcctctcgtt ccgccgcgtt ccattcaccc 61 attccgccat ccgcgactct attcacttgt tgtatttgta cttttatcag cgactaaaaa 121 gaaacgaatc gaaataaatg taaataacaa cggcgaaaca aaagtgaaac aaattcgtga 181 cgcgcctgat tacttcttta ttttttgtgt caacagtgtg tgcagtgcaa tgtgactgtg 241 aagcgccaac acaagcaacg aaaaaaaaac aaataaataa aaaaaaactt tagtgagtga 301 tttcaaacac tacaaactag aaagtacact ttaaaaaacc ttacaagaaa tactctaacg 361 cctagagtat ttaacggacc attagaaacc tgatggcaac aacaacggca acaacgcagg 421 cagcaggagc tgcaccagct ctcaatttat tgcccgccag cagcaacaat aatctaaata 481 atgcactaaa cattagcaac aataataaca acaacaacaa caacagcgtc gtgataagcc 541 agccgattaa aataccgctg accgagcgct tctcatcgca aacatcgacg ggttcggcgg 601 acagtggcgt gattgtttcc agtgcatcgc agcagcaact gcagttgccg ccaccgcgca 661 gcagcagtgg ctccctgagc ttgccacagg cgccacctgg cggcaagtgg cggcagcagc 721 agcagcgcca gcagctgcta ctcagtcaag atagcggcat cgagaacggt ggtggtccca 781 cgaaggcgaa agatcatcgt catcagggag tgggattgaa gggaaagccg aaccatcatg 841 ccataagttc caaggagagc ggcgagagca gcgagagcct gggcagcaat tgctcagaga 901 cccaggatca tcgggatccg cagaatcccc agcagaggat cagggcctcc tccgccctgg 961 agctcagtag cgtcgacaat cctcaatcca ccgtggtggg cagcctgcgc agccgcatca 1021 agtacaagag caccaatagc accggaaccc agggattcga tgtcgaggat cgcatcgatg 1081 aggtcgagat ctgtgatgat gactgcgatg atgaggagga aatcgaggaa gaggaggagg 1141 acgatggtgt caatgtggac gacgacaacg acaaccagtc ggacagtcag tcgggtatta 1201 taatcaacct gaagagcaag acaaccgaac aacaggtggc ggatagtgag ggggctaagg 1261 aggtggatga tagatccaag aaccgactac taccgcccga tcaggcggaa ctaacggtgg 1321 ccgctgcctt ggcccgtcgt cgcgacgcca agagcctggc caccgacgga cacatctact 1381 tcccgctgct caagatcagc gaggatccgc acatcgatgc caagctgatc aaccgcaagg 1441 acggcctcca ggacacgatg tactatctcg atgagttcgg gagtcccaag ctgcgggaga 1501 agttcgcccg caagcagaag cagctgctcg ccaagcagca gaagcagatg atgaagcgcg 1561 aaaggaggag cgaggagcag cgcaagaagc gcaacaccac ggtggcctcc aatctggcgg 1621 ccagcggagg agttccagac gatgacgttg acgagaccaa agatgattat aatacaacaa 1681 ataggaaaca aaaaccacac tgtgatacta gctctaggag caaacataac tcggaacccc 1741 atccccataa caatcctcat cataatcata ataatatcga tgtggaggag gaggacagcc 1801 tcgtggacag tggagcggtc aagatgcgcc gccacagcca cgacaaccac tacgatagaa 1861 tcatccccca gagcaacgca accaccacca ccacccgccc taagaacgat catcatcctc 1921 aggcgccgca ggacaccgag gatatcgata tcgagcaagg agccgaaccc cccgagctcg 1981 aggatgcgga tagcgatgag agcggcgaga acgttaagac tgccaaattg gccagaactc 2041 agtcctgcgt cagttggacc aaagtggtgc aaaagttcaa aaatatacta ggtcgcgatg 2101 gttctaaaat cacaacagtt gttgcaacac ccggccaagg caccgatcgc gtacaagagg 2161 tctcctatac agacacaaag gtcatcggca atggcagctt cggcgtcgtg ttccaggcaa 2221 agctctgcga taccggcgag ctggtggcaa tcaaaaaagt tttacaagac agacgattta 2281 agaatcgcga attgcaaatt atgcgcaaat tggagcattg taatattgta aagcttttgt 2341 actttttcta ttcgagcggt gaaaagcgtg atgaagtatt tttgaattta gtcctcgaat 2401 atataccaga aaccgtatac aaagtggctc gccaatatgc caaaaccaag caaacgatac 2461 caatcaactt tattcggctc tacatgtatc aactgtttag aagtttggcc tacatccact 2521 cgctgggcat ttgccatcgt gatatcaagc cgcagaacct tctgctcgat cctgagacgg 2581 ctgtgctgaa gctctgtgac tttggcagtg ccaagcagct gctgcacggc gagccgaacg 2641 tgtcgtatat ctgctcccgg tattaccgcg cccccgagct catctttggc gccatcaatt 2701 atacaacaaa gatcgacgta tggagtgccg gttgcgtttt ggccgagcta ctgctgggcc 2761 agcccatctt ccctggcgac tccggtgtcg atcagcttgt cgaggtcatc aaggtcctgg 2821 gcacaccgac aagagaacag atacgcgaga tgaatccaaa ctacacggaa ttcaagttcc 2881 cacaaattaa gagtcatcca tggcagaaag ttttccgtat acgcactcct acagaagcta 2941 tcaacttggt gtccctgctg ctcgagtaca cgcccagtgc ccggatcaca ccgctcaagg 3001 cctgtgcaca tccgttcttc gacgagctgc gcatggaggg caaccacacc ttgcccaacg 3061 gtcgcgagat gccgccgcta ttcaacttca cagagcatga actctcgata cagcccagcc 3121 tagtgccaca attgttgccc aagcatctgc agaatgcctc cggcccaggc ggcgccaacc 3181 gatcctcagc cggcggagca gcctctgctg cggccagcgg ctccaccagc gtctcgtcca 3241 caggcagtgg cgcctcggcg gaaggatccg ccgcccagca gccgcaggcg cagggcacag 3301 cagcagcagc agctgcggga tccggatcgg gatcgggatc gggatcaggc ggagcagcag 3361 cagccggcgg atcaggatcc ggcaacaaca gcagcggagg cggagcatcc ggagcgccgt 3421 ctgccgccgt ggcagctggt gccaatgccg cggtagccgg cggaggcggc ggtggcggag 3481 tcggtgcggc ggccactgct gccacagcag ctggcgctat ggccgcgacc aatgccggcg 3541 gcgccaatgt gacaggttct cagtcgaaca gcgccctcaa cagcagcgga agtggcggca 3601 gtggaaatgg cagcggaaac ggaaatggaa acggagaggc agctgtctcg gcatcgggat 3661 cgggtggaaa cggtggaaat ggaggaaacg gcggggacaa cgacgctggc gacagtggag 3721 ctgcaggatc cggaggatct ggaggaggag cagctgagac cgaggcagcg gcgtcgggtt 3781 agcgcgagtc aggaggtgct ctcttttaat gtaatgttat tcacaggatt ttcgcttggg 3841 ccagggatta agttaccatt accatttttg gcccagaccc acacacacac acacagttac 3901 actcgatgga aacagaagag atagaatgag aagagaagtc ccagcaaaag ctaagagaaa 3961 atgatagaca aaggaattca aattctgatt cagattcact ccacaaaaca ccacccaccc 4021 aatacactca cacccactca cacaccccag ctccagcaca cacacacatg tatgtatgta 4081 tatctagcta tatgcattgg gcgcaagcaa atatttagca taaaactcga aagaaagaaa 4141 aaacaaaaga atccacttta aactatgcat aaataattta aataataatc tgtattattg 4201 acacgggaca agcccgtaag gatgttgaaa aataataatc ggtaaaagaa aaagaaaaac 4261 ccccctccaa tatagaaaat aacatttaac aaatagctcg cgaaacgtaa taaaacttaa 4321 gtcaaagatg agaaatggaa aacaaaccac aagagaaatg aggaaatact tagtgaaata 4381 aatcaaaatt tttgccccat ttaacgttta tatatatgcg attatacaaa tatataacga 4441 tcacagcagt tagcaatcca tagtaaaagt aaaaatgaga aacaaaaaca aaaataaaaa 4501 taaaaggcgg caaagtgaga actagcaaaa aggagatgat ataacattta ctaaactcgc 4561 gcaagtgcat ctatataaat acgatatata gatattatat aaacatagat atatatacga 4621 gatattaaag agacattcgt aatcctagta gcaacccccg atcccccaat cccgacccca 4681 atgaaccgga aaatgccgag gtatttccgt gcaacatttt ccgtggcctg ttctcaagtg 4741 acgacgttta ggaactacga ttatctaagg aggcggtcgt cgaaatgcaa tatacactaa 4801 cactaaacac tatacataaa tacatgaata caaaggttat aacaaattga gcaaaacgta 4861 aatgaatgtg taatgaatga gtaaaacgct tttagcgcgc gacgccaccc attaacttaa 4921 attaacaatg caaataatac ataatacaag aggtaatgag taatgagacg atgatgatga 4981 gatagtaaag cctaaagcca ggatcttgat atatgtaaaa gtaatcgaca aagaacaaac 5041 aacatttagc tgcaattgaa aatttaaact tatttaatac aaattgaagt aaacgtaaac 5101 gtaaaagtaa aagtaaaata caatgaaacc gaaaccgaaa ccgatgatgg ttttagaatg 5161 taaggcctta gatcaaccgg aaactcctgc gcgactatag tactacccct cgccctctcc 5221 ctcgcctcgg ttcgattggt tcgaatctct atctctatac ctatgaaacc caaaaaccca 5281 aaaaccgaaa acccaaaaac cacccactta aactgcttag atctcgtttt gattatgcga 5341 tctgcgatta tgtccaagca ctttaagccc attaaaacta aaaccaacta agtaaacaaa 5401 ggaaaacata aagaaaacca aaaagaaaaa ggaaagcaag tctatttgta tgtatttcca 5461 tagaactcct tatatattat atgagaacat attttttttt actaactaaa tgatacattt 5521 atacaattaa tgaacgttga gttttgtggc atcaaaacta aataaattta actatataca 5581 tatatgtaca cacccacaca caagaacaca cactaacatt cagacatttt cacacgcaca 5641 tagctctata atttcaagta aatttttaaa acccaagatt acccaactaa tttccccaaa 5701 acattttggt aaataatcta agaaggcggc aaacaagtta tataaaccca aacccccaaa 5761 agacacccca cacacacgcg atgtttgatt tgtaattaaa aatttgaaca gaagaatgga 5821 aaaataaagc ccaaaacaat atatatacac acatatatat gcatagaaaa acatacttat 5881 atatgatgaa caacttcagc gtttcgcttt aattatgagg caacaaccac atgagaaatc 5941 caaaccaaac ttaaacttaa ttaacttaaa cacaaaccta aactaattgc aaaaataaca 6001 aatggcaaaa ccaaattgaa agaggaagtg aaaatgaaaa taaaacacga gacaaatgcg 6061 taaagaaaac attaatttaa aaacaataaa aattacaaac aaaaatata