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LOCUS XM_017150957 4278 bp mRNA linear INV 09-DEC-2024 IF (LOC108063756), transcript variant X2, mRNA. ACCESSION XM_017150957 VERSION XM_017150957.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017150957.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4278 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4278 /gene="LOC108063756" /note="phospholipid-transporting ATPase IF; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063756" CDS 208..4173 /gene="LOC108063756" /codon_start=1 /product="phospholipid-transporting ATPase IF isoform X2" /protein_id="XP_017006446.2" /db_xref="GeneID:108063756" /translation="MGKFFERLLQKRGSRVSTINDWLQIQIGGPEDVKKKRPKGQNRI KSTKYTLITFLPQNLLEQFRRIANFYFLVMTIISLLIDSPVSPMTSLLPLVFVIAVTA AKQGYEDILRYRTDNVVNSSPVTVIRDGKEAIIKSEDVISGDLIVVERDCDVPCDLVL LRSTDPHGKCFITTANLDGESNLKTLMVPRDLPTVDLQEMHKLGVIECESPTTDLYSF NGKIELKGGEGRVLPLSAENVLLRGSRVKNTECVIGCAVYTGMISKLQLNSRLTRNKN ASSETYINRFLIVILIALIAIVTLLYFLKRYNELFVIPKLTYLGDATDSYSVKQFLQD YLSFLILFNYLIPISLYVTIELQRGISSWFMEWDIELYEKETDQPCVVNTSNLNEELG QINILFSDKTGTLTKNEMNFQQCSIDGSKFLFKKTRLEDEETKALLDINKFNASQRVF FQALSICHTVQVASGSLEEADAGATKREPPVAVAIKSGPPEMYSISDITEESHNASQQ SELNVSHTIDNSLSGHPNGSNSTATSSDVNPLLVSDDSYGAVERRKRPVVVKRSPNFA RSNRMQNAPAQPASAIDLSVNQTDVLNGNATLNGVETAPNYRPISLQFRRSTSEKDLQ QSWEPQNGQAPGHRRAHSYGAPNAYLTNPIAASSPPANVLFRSTSTTSRESYAAPTFT RQPTILMRAESQRRKNEIRDFIFTLDYQASSPDEKALVEACANLGMVYTGDDDETLRV RIVPPHMDYKRPFAKPKEETFQRLHVLEFTSDRKRMSVIVRDTEGRKWIYTKGAESYV FPLCANSSADLVSKTDAHISDFARLGLRTLAIARRLIAEEEYQDFLVELAQANSSLES RKQLSEECYAKIESNLDLLGATAVEDALQDDVADTLVSLQAAGIKIWVLTGDKVETAL NIALSCGHIPPDAKKYFIIDCKNREEMLLHLNALDREIIFGIGQECALLIDGKSLGVA LAEASSEFRDVAVKCTAVLCCRLSPLQKSEVVSLIKSSNENYNTASIGDGANDVSMIQ EAHVGIGIMGREGRQAARCADFAFAKFCMLKRLLLVHGHYHSVRLSLLVLYFFYKNIV FMGLMFLFQFHTLFSSSSVYDSLFLTLYNVIYTSLPILFIAISEKPYTEEKLMRTPQL YKKNTDNKQLHWPYFLMWVLFAVYHSVIIFYFAFCLFSYNNVILNYGQTVAFSCFGTL LMWTVVVVVNLKLWLESMYLSFWYIFTIIISILGFVITTVIYNVINLDYDTDIYWAYN NLLASLPVWLWILLTCVACLVPDYTIRMLRRALNIKSFSIFPGKQRKLKMREKFESTY L" misc_feature 331..4095 /gene="LOC108063756" /note="The haloacid dehalogenase (HAD) superfamily includes carbon and phosphorus hydrolases such as 2-haloalkonoate dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, among others. These...; Region: Haloacid Dehalogenase-like Hydrolases; cl21460" /db_xref="CDD:473868" polyA_site 4278 /gene="LOC108063756" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcaaaaaacg ttattcccga taagcaatac gacgaattcg tggtaacgaa gtattttaga 61 gagatacaga aatcggtcag ttttagtcag ttatgctatt gtttcgcgtc ggtaccacat 121 tgtcctcaaa ctcgaacgaa ggtatatgaa cttggaaagg ctctaaaaag cccccatcgc 181 agtggataaa atcaagggat catcatcatg ggcaagttct tcgaaagact tcttcagaag 241 aggggctccc gagttagtac aataaatgat tggcttcaaa tacaaattgg tgggcccgag 301 gatgtgaaga aaaaaaggcc aaagggccaa aaccgcataa aatcgacgaa atacacattg 361 atcacattcc tgccacaaaa tctattggaa caatttcgcc gcattgcgaa tttttacttc 421 ctggtgatga caataatatc ccttttaatt gatagtccgg tatctccgat gacctcgctt 481 ttacccctgg tttttgtaat tgccgtgacc gcagctaaac agggctatga agatatcctt 541 cgatatagga cagacaacgt ggtaaattct tcgccagtca cggttatcag ggatggaaag 601 gaggctatta ttaagtcgga ggacgtcatt tccggggatc taatcgtagt cgagcgagac 661 tgcgatgtgc cgtgcgatct ggtcctgctg agatccacag atccgcatgg taagtgcttc 721 attaccacgg ccaatctgga cggtgagtcc aacctgaaga ccctgatggt gccgcgggac 781 ctgcccaccg tggacctgca ggagatgcac aagctgggcg tgatcgagtg cgagagtccc 841 accacggatc tgtacagttt caacggcaag atcgagctga agggcggcga gggacgagtc 901 ctgcccctgt ccgccgagaa tgtcctgctg cgcggatcgc gggtgaaaaa caccgagtgc 961 gtcatcgggt gcgccgtcta tacgggcatg atctccaagc tgcagctgaa cagccggctc 1021 acccggaaca agaacgcctc cagcgagacg tacatcaatc gcttcctgat cgtcatactc 1081 atcgccctca tcgcgatagt caccttgctg tacttcttga agaggtacaa cgagctgttt 1141 gtgataccca agcttaccta tctgggggat gcgacggaca gttacagcgt gaagcagttc 1201 ctgcaggact acctgtcgtt cctgatcctg ttcaactacc tgatccccat ctccttgtac 1261 gtgaccatcg agctgcagcg cgggatcagc agctggttca tggagtggga catcgagctg 1321 tacgagaagg agaccgacca gccgtgcgtg gtgaacacat cgaacctgaa cgaggaactg 1381 ggccagatca atatactctt ctccgataag acgggcacgc tgaccaagaa cgagatgaac 1441 ttccagcagt gctcgataga cggcagtaag ttcctgttca agaagacgcg gctggaggat 1501 gaggagacca aggcgctctt ggatatcaac aagttcaatg ctagccagcg cgtcttcttc 1561 caggccctgt ccatttgcca cacggttcag gtggcctccg gctctctgga ggaggcggat 1621 gcgggggcca ccaagaggga gcccccggtg gctgtggcca ttaagtcggg tccgccggag 1681 atgtactcca tttcggacat caccgaggag agtcacaatg ctagtcagca gagcgagctt 1741 aacgttagcc acaccatcga caactcgctg tcgggtcatc cgaatggctc caattcgacg 1801 gccacttcat cggatgtcaa tcccctgctc gtctccgacg acagttacgg tgccgtggag 1861 cgtcgcaagc gtccggtggt ggtgaagagg agtcccaact ttgcccgctc caatcggatg 1921 caaaatgctc cagcccagcc cgcttctgcc atcgacctga gtgtcaacca gactgacgtc 1981 cttaatggga atgcgaccct gaacggagtg gagaccgctc ccaattatcg gcccatttcc 2041 ctgcaattca gacggtctac ctcagagaag gatctgcagc agtcctggga gccgcagaac 2101 ggccaggctc ccggccaccg gagggcccac tcctatggag cgcccaatgc ctacctcacg 2161 aaccccattg cagccagctc tccgcccgcc aatgtcctct ttcgatccac cagcaccact 2221 tcccgggaat cctatgccgc acccaccttc acccgacagc ccacaattct catgcgtgcc 2281 gagtcgcagc gcaggaagaa cgaaattcgc gatttcatat tcaccttgga ctaccaggcc 2341 tccagtccgg acgagaaggc tttggtggag gcctgtgcca atttgggaat ggtctacacc 2401 ggagacgatg acgaaacact gcgggtgagg attgtgccgc cccacatgga ctacaagcga 2461 ccatttgcca agcccaagga ggagaccttc cagcgactcc acgtcctcga gttcacatcg 2521 gaccgcaagc gaatgagtgt cattgtccgg gatacggaag gcaggaagtg gatctatacc 2581 aagggcgccg agagctacgt ttttccgctc tgcgccaaca gttcggcgga tctcgtctca 2641 aagacggacg cccacatcag cgactttgcc cgtctcggcc tgcgtacctt ggccattgcc 2701 cggcgtttga ttgcggagga ggagtatcag gacttcctcg tggaactggc ccaggccaat 2761 agctcgttgg agagtcgaaa acagctcagc gaggagtgct acgcgaagat cgaaagcaat 2821 cttgacctgc tgggagcgac agctgtagag gatgccctgc aagacgatgt ggcggatacg 2881 ctggtgtccc tgcaggcggc agggattaag atctgggtgc tgacgggcga taaagtggag 2941 accgcactga acattgccct gtcctgcgga cacattccgc ccgatgccaa gaagtacttc 3001 atcatcgact gcaagaaccg cgaggagatg ctcctccacc tgaacgcctt ggatcgagag 3061 atcatattcg gaatcggcca ggagtgcgcc ctgctgatcg acggcaagag cttgggcgtg 3121 gccttggcgg aggccagctc ggagttccgt gacgtggctg tcaagtgcac agccgtcctg 3181 tgctgtcgcc tcagtccgct gcagaagagc gaggtggtgt cgctgatcaa gtcctccaac 3241 gagaactaca acacggcgtc cattggcgat ggggccaatg atgtttcgat gatccaggag 3301 gcccatgtgg gcatcggaat catgggacgc gagggcaggc aggcggcacg ttgtgcggac 3361 tttgcctttg ccaagttctg catgctgaag cgactgctcc tcgtccatgg ccactaccac 3421 agtgtccgac tgtcattgct ggttttgtac ttcttctaca agaacatcgt cttcatgggc 3481 ctcatgttcc tgttccagtt ccacaccctg ttctcctcgt cctccgtcta cgactccctg 3541 ttcctcacgt tgtataatgt gatatacacc tcgctgccca ttctcttcat agccatctcc 3601 gaaaagccat acaccgagga aaagctaatg agaacgccgc agctttacaa gaagaatacg 3661 gacaataagc agctacactg gccgtacttc cttatgtggg tgctctttgc cgtataccac 3721 tccgtcatca ttttctactt cgccttctgc ctcttctcct ataacaacgt gatcctaaac 3781 tacggccaga cggtggcctt ttcctgcttc ggaaccctgc tcatgtggac ggtggtcgtg 3841 gtggtgaacc tcaagctttg gctcgagtcg atgtacctgt ctttctggta catattcacc 3901 atcatcattt ccattttggg ttttgtaatc acaacggtta tctacaacgt tatcaatctg 3961 gactacgaca ccgacatcta ttgggcctac aacaatctgt tggcctccct gccagtctgg 4021 ctgtggatcc tattgacctg tgtggcctgc ctggtccccg actataccat ccgaatgctc 4081 cgacgggccc taaacatcaa gagcttcagt attttccccg gaaaacaacg gaaactcaaa 4141 atgcgtgaaa agttcgagtc gacatacttg taaaacgact ctagcccata gtttttatac 4201 ccctaattta tttatttcct ttatgtatac tttttttttt tgttagataa aagaaaaaaa 4261 tgtttgttga aaaattaa