Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017150954 4659 bp mRNA linear INV 09-DEC-2024 IF (LOC108063756), transcript variant X1, mRNA. ACCESSION XM_017150954 VERSION XM_017150954.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017150954.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4659 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4659 /gene="LOC108063756" /note="phospholipid-transporting ATPase IF; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063756" CDS 487..4554 /gene="LOC108063756" /codon_start=1 /product="phospholipid-transporting ATPase IF isoform X1" /protein_id="XP_017006443.2" /db_xref="GeneID:108063756" /translation="MNFFRHDHLSGFRPIDQIRSYPAATTAWADQESFHLKDAFLWNW HKGSRVSTINDWLQIQIGGPEDVKKKRPKGQNRIKSTKYTLITFLPQNLLEQFRRIAN FYFLVMTIISLLIDSPVSPMTSLLPLVFVIAVTAAKQGYEDILRYRTDNVVNSSPVTV IRDGKEAIIKSEDVISGDLIVVERDCDVPCDLVLLRSTDPHGKCFITTANLDGESNLK TLMVPRDLPTVDLQEMHKLGVIECESPTTDLYSFNGKIELKGGEGRVLPLSAENVLLR GSRVKNTECVIGCAVYTGMISKLQLNSRLTRNKNASSETYINRFLIVILIALIAIVTL LYFLKRYNELFVIPKLTYLGDATDSYSVKQFLQDYLSFLILFNYLIPISLYVTIELQR GISSWFMEWDIELYEKETDQPCVVNTSNLNEELGQINILFSDKTGTLTKNEMNFQQCS IDGSKFLFKKTRLEDEETKALLDINKFNASQRVFFQALSICHTVQVASGSLEEADAGA TKREPPVAVAIKSGPPEMYSISDITEESHNASQQSELNVSHTIDNSLSGHPNGSNSTA TSSDVNPLLVSDDSYGAVERRKRPVVVKRSPNFARSNRMQNAPAQPASAIDLSVNQTD VLNGNATLNGVETAPNYRPISLQFRRSTSEKDLQQSWEPQNGQAPGHRRAHSYGAPNA YLTNPIAASSPPANVLFRSTSTTSRESYAAPTFTRQPTILMRAESQRRKNEIRDFIFT LDYQASSPDEKALVEACANLGMVYTGDDDETLRVRIVPPHMDYKRPFAKPKEETFQRL HVLEFTSDRKRMSVIVRDTEGRKWIYTKGAESYVFPLCANSSADLVSKTDAHISDFAR LGLRTLAIARRLIAEEEYQDFLVELAQANSSLESRKQLSEECYAKIESNLDLLGATAV EDALQDDVADTLVSLQAAGIKIWVLTGDKVETALNIALSCGHIPPDAKKYFIIDCKNR EEMLLHLNALDREIIFGIGQECALLIDGKSLGVALAEASSEFRDVAVKCTAVLCCRLS PLQKSEVVSLIKSSNENYNTASIGDGANDVSMIQEAHVGIGIMGREGRQAARCADFAF AKFCMLKRLLLVHGHYHSVRLSLLVLYFFYKNIVFMGLMFLFQFHTLFSSSSVYDSLF LTLYNVIYTSLPILFIAISEKPYTEEKLMRTPQLYKKNTDNKQLHWPYFLMWVLFAVY HSVIIFYFAFCLFSYNNVILNYGQTVAFSCFGTLLMWTVVVVVNLKLWLESMYLSFWY IFTIIISILGFVITTVIYNVINLDYDTDIYWAYNNLLASLPVWLWILLTCVACLVPDY TIRMLRRALNIKSFSIFPGKQRKLKMREKFESTYL" misc_feature 712..4476 /gene="LOC108063756" /note="The haloacid dehalogenase (HAD) superfamily includes carbon and phosphorus hydrolases such as 2-haloalkonoate dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, among others. These...; Region: Haloacid Dehalogenase-like Hydrolases; cl21460" /db_xref="CDD:473868" polyA_site 4659 /gene="LOC108063756" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgtggacgt gcatcataga actgttcaat tgaagtgtta aaattgccca cttaacatcg 61 ttttaaggtt atatattaag tgtgctgaga aaaagtcgat aaatatacaa atgtctgtat 121 gtgcattggg gcggacctta gttttggtga tttaaggcta tgatataggc cgtaaaacca 181 aatatgcttc gtgcaaatgt atccgcacta tgcaataaaa tattatagag atccggatct 241 tttgtgcgta aaaagcttat gtgcgaccga gtgtcgatgg ataaacaata attaacaata 301 gtcaaatagt aggtgtatta aaatatgatt gcaatccaaa acgcgaaatc gagagaatcg 361 tcgtaaagtt tccattggct tgttattgtc cggaaaaatc agttccgtga aagggcttta 421 aagagatgat cggacgcgac agtggtcaca ccgctaccaa atgcgtcaat cttagaatga 481 tgaacaatga atttctttcg ccatgaccat ctgagcggct ttcgacccat cgatcagatc 541 cgatcctatc ccgcagccac aacagcgtgg gcagatcagg aatcgttcca tctcaaggac 601 gcattcctat ggaactggca taagggctcc cgagttagta caataaatga ttggcttcaa 661 atacaaattg gtgggcccga ggatgtgaag aaaaaaaggc caaagggcca aaaccgcata 721 aaatcgacga aatacacatt gatcacattc ctgccacaaa atctattgga acaatttcgc 781 cgcattgcga atttttactt cctggtgatg acaataatat cccttttaat tgatagtccg 841 gtatctccga tgacctcgct tttacccctg gtttttgtaa ttgccgtgac cgcagctaaa 901 cagggctatg aagatatcct tcgatatagg acagacaacg tggtaaattc ttcgccagtc 961 acggttatca gggatggaaa ggaggctatt attaagtcgg aggacgtcat ttccggggat 1021 ctaatcgtag tcgagcgaga ctgcgatgtg ccgtgcgatc tggtcctgct gagatccaca 1081 gatccgcatg gtaagtgctt cattaccacg gccaatctgg acggtgagtc caacctgaag 1141 accctgatgg tgccgcggga cctgcccacc gtggacctgc aggagatgca caagctgggc 1201 gtgatcgagt gcgagagtcc caccacggat ctgtacagtt tcaacggcaa gatcgagctg 1261 aagggcggcg agggacgagt cctgcccctg tccgccgaga atgtcctgct gcgcggatcg 1321 cgggtgaaaa acaccgagtg cgtcatcggg tgcgccgtct atacgggcat gatctccaag 1381 ctgcagctga acagccggct cacccggaac aagaacgcct ccagcgagac gtacatcaat 1441 cgcttcctga tcgtcatact catcgccctc atcgcgatag tcaccttgct gtacttcttg 1501 aagaggtaca acgagctgtt tgtgataccc aagcttacct atctggggga tgcgacggac 1561 agttacagcg tgaagcagtt cctgcaggac tacctgtcgt tcctgatcct gttcaactac 1621 ctgatcccca tctccttgta cgtgaccatc gagctgcagc gcgggatcag cagctggttc 1681 atggagtggg acatcgagct gtacgagaag gagaccgacc agccgtgcgt ggtgaacaca 1741 tcgaacctga acgaggaact gggccagatc aatatactct tctccgataa gacgggcacg 1801 ctgaccaaga acgagatgaa cttccagcag tgctcgatag acggcagtaa gttcctgttc 1861 aagaagacgc ggctggagga tgaggagacc aaggcgctct tggatatcaa caagttcaat 1921 gctagccagc gcgtcttctt ccaggccctg tccatttgcc acacggttca ggtggcctcc 1981 ggctctctgg aggaggcgga tgcgggggcc accaagaggg agcccccggt ggctgtggcc 2041 attaagtcgg gtccgccgga gatgtactcc atttcggaca tcaccgagga gagtcacaat 2101 gctagtcagc agagcgagct taacgttagc cacaccatcg acaactcgct gtcgggtcat 2161 ccgaatggct ccaattcgac ggccacttca tcggatgtca atcccctgct cgtctccgac 2221 gacagttacg gtgccgtgga gcgtcgcaag cgtccggtgg tggtgaagag gagtcccaac 2281 tttgcccgct ccaatcggat gcaaaatgct ccagcccagc ccgcttctgc catcgacctg 2341 agtgtcaacc agactgacgt ccttaatggg aatgcgaccc tgaacggagt ggagaccgct 2401 cccaattatc ggcccatttc cctgcaattc agacggtcta cctcagagaa ggatctgcag 2461 cagtcctggg agccgcagaa cggccaggct cccggccacc ggagggccca ctcctatgga 2521 gcgcccaatg cctacctcac gaaccccatt gcagccagct ctccgcccgc caatgtcctc 2581 tttcgatcca ccagcaccac ttcccgggaa tcctatgccg cacccacctt cacccgacag 2641 cccacaattc tcatgcgtgc cgagtcgcag cgcaggaaga acgaaattcg cgatttcata 2701 ttcaccttgg actaccaggc ctccagtccg gacgagaagg ctttggtgga ggcctgtgcc 2761 aatttgggaa tggtctacac cggagacgat gacgaaacac tgcgggtgag gattgtgccg 2821 ccccacatgg actacaagcg accatttgcc aagcccaagg aggagacctt ccagcgactc 2881 cacgtcctcg agttcacatc ggaccgcaag cgaatgagtg tcattgtccg ggatacggaa 2941 ggcaggaagt ggatctatac caagggcgcc gagagctacg tttttccgct ctgcgccaac 3001 agttcggcgg atctcgtctc aaagacggac gcccacatca gcgactttgc ccgtctcggc 3061 ctgcgtacct tggccattgc ccggcgtttg attgcggagg aggagtatca ggacttcctc 3121 gtggaactgg cccaggccaa tagctcgttg gagagtcgaa aacagctcag cgaggagtgc 3181 tacgcgaaga tcgaaagcaa tcttgacctg ctgggagcga cagctgtaga ggatgccctg 3241 caagacgatg tggcggatac gctggtgtcc ctgcaggcgg cagggattaa gatctgggtg 3301 ctgacgggcg ataaagtgga gaccgcactg aacattgccc tgtcctgcgg acacattccg 3361 cccgatgcca agaagtactt catcatcgac tgcaagaacc gcgaggagat gctcctccac 3421 ctgaacgcct tggatcgaga gatcatattc ggaatcggcc aggagtgcgc cctgctgatc 3481 gacggcaaga gcttgggcgt ggccttggcg gaggccagct cggagttccg tgacgtggct 3541 gtcaagtgca cagccgtcct gtgctgtcgc ctcagtccgc tgcagaagag cgaggtggtg 3601 tcgctgatca agtcctccaa cgagaactac aacacggcgt ccattggcga tggggccaat 3661 gatgtttcga tgatccagga ggcccatgtg ggcatcggaa tcatgggacg cgagggcagg 3721 caggcggcac gttgtgcgga ctttgccttt gccaagttct gcatgctgaa gcgactgctc 3781 ctcgtccatg gccactacca cagtgtccga ctgtcattgc tggttttgta cttcttctac 3841 aagaacatcg tcttcatggg cctcatgttc ctgttccagt tccacaccct gttctcctcg 3901 tcctccgtct acgactccct gttcctcacg ttgtataatg tgatatacac ctcgctgccc 3961 attctcttca tagccatctc cgaaaagcca tacaccgagg aaaagctaat gagaacgccg 4021 cagctttaca agaagaatac ggacaataag cagctacact ggccgtactt ccttatgtgg 4081 gtgctctttg ccgtatacca ctccgtcatc attttctact tcgccttctg cctcttctcc 4141 tataacaacg tgatcctaaa ctacggccag acggtggcct tttcctgctt cggaaccctg 4201 ctcatgtgga cggtggtcgt ggtggtgaac ctcaagcttt ggctcgagtc gatgtacctg 4261 tctttctggt acatattcac catcatcatt tccattttgg gttttgtaat cacaacggtt 4321 atctacaacg ttatcaatct ggactacgac accgacatct attgggccta caacaatctg 4381 ttggcctccc tgccagtctg gctgtggatc ctattgacct gtgtggcctg cctggtcccc 4441 gactatacca tccgaatgct ccgacgggcc ctaaacatca agagcttcag tattttcccc 4501 ggaaaacaac ggaaactcaa aatgcgtgaa aagttcgagt cgacatactt gtaaaacgac 4561 tctagcccat agtttttata cccctaattt atttatttcc tttatgtata cttttttttt 4621 ttgttagata aaagaaaaaa atgtttgttg aaaaattaa