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LOCUS XM_017150917 7886 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017150917 VERSION XM_017150917.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017150917.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7886 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7886 /gene="mei-41" /note="meiotic 41; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063739" CDS 106..7668 /gene="mei-41" /codon_start=1 /product="serine/threonine-protein kinase ATR" /protein_id="XP_017006406.3" /db_xref="GeneID:108063739" /translation="MSNQRKDMWRLLYNHVNRNASCLSRVYTVIEDILCQEPSLISCS LVRELHNKFQDTFLLWLLNKLAKCLSEAPDGSHCINLQRKILSSCCSNHPKLYERLVL AYVEALEETHLQLSSLDFSQECPAITITLSIFQCDVACLQEFDPQCAFEDIRLPVEQA DMYAKSLLEVLQHAHHIGYATHGDIFPASLHQALLILKECEMDTKLASLNYCHCVLGL QSSTSWSTNPDVGHYALLTLEATTIMWSNVPKWLELGCMTRQELRQLNTTTKQLLLVL QKRARPVLQLGYLLLNEILSLPADIELDDGLLETLTAFIRGQLEHSGTSLEQLVHFQQ LLLAHWHSHPAHLLPMLAAMAVKQAEMRTSVVQVLTESLVCILKRKQVQAMEWLELVA ILRTFRQLEHLVLAQSQLKTAENEGHIDSAVLAKLPLQCEIVKVMDANWNNISMQMVE LESKCPSDNEDIYLEICSLLMQVSFIRHFLKTQTQHQLLAILQRHMELSHLCAIRLET PSSAHTQMQGFYAQHYLGLIQSEEEVFLNNLPQLYIAGYIKPEQLLKSLPSIANRRGR AHVLRLLLCSQPGTLSVFKDQERIELYCPKCRRLPEKLPGIYLGKCKQQMASLDFSSA SLALIAKDLLYDPDFSYISHHLDLLSLDPNVIHRLLGKSEGLQRVSVKVLGQLVSAMR AVSPDFMEKFGHLVLGAIKDMLGKPLAEQNVLQQRHVLDILIAIAHTEDDEIWLFHWF KMTFFFLVHTRSLVAQEAVLAATEMCAGHGLQTINLWNWYKRDALDLAVRLALTGYLS HGVRFTRSLRALTKMLGFTCVQEFTCKYQRLVTAMVLPHCIREPRCKGVLVLIAKQMR KPIATWFSTSFLRIYTHVYLTQEPELANKCIELVVSCTQSSLQQLMNADVKQTVAELL IYFNRNPTFVMRSFQSLLQLTIGSEEELSSQTANAEFANFIAERFLGVITYFESCLSE LAFEKPLKEETLYSLGQIMRFVGSQHVTQFRFKIIAMLSFVHTLQEPRLQRICLKIWH IFLHVVNVQELGPSLGRIVATLQPLLADSESRKQVNDLYEFIILRNASMLGNFVTDLY FLDRMEHVAPSIQKCIRRHTAHLDLKGSAEEEGQSSAAPQLAEQLRFLQKHITDECLQ VRVYALQQLGELFGRRRDQLTSTILSEVPLEPLLEQIVNVLMAGCQHDDGQLQMASAK CLGELGAIDASYLPSNYNFASPQPVPLNILSDDFAVLALTALCRGYQFQQNTKHVDSF SLAIQETLATCGISPKEQKKVQLWQSLPARMRQVMEPMLHSCYTCCHRTNTCLQQPLF GSHYSHNFYEEWAFLWASRLIDYIPPSDTRHLLSSYKPCIKRDGNMLSTFYPYILLHA LLECTAEQAGHIQEEFMAVLRANEESSSSVRGRQELGAIKESAFKQFESRKYAAGIKP SQNSSILERKEDSSRVPRLAGKLCAELLDFLQRWLREWQRIHGRSTGGKPPETVDPNY RKIHEFLKRIPKLLVSRASYNCGEFARALSYLESYLDEKGGEDKSRRLLEQFTFLVEV YGSLRDSDSVEGAVQVRSYDMSVTQDILVNRLVERQQDMITSYEQLLSSTDQMQPDHV RAMIDAYLRDTPKTAQLIADGLWQRLSDQYSEQCFAECKSELLWRLGSYDALEELQSS WPAQCSQGCLKLRRPLTTRTEFDTLLDGMRGSVLEELRSCSAVQQHSYANAYDAVLKL HLVHELQCSQLLVENLEQDRDRDSQERLMEKYFKDWQYRLQVIQPQVRVQESIYSFRR NILAELQRRLADRPHLLPHLQTELARIWLNSAQINRNAGQLQRAQLYILKASEYKPTG LFIERAKLLWQKGDQVMAMNYLEEQLSIMRSECQGNFKQLPPEQRHLFFRGKYLQAVY SAESMHLCADAVLKYFEEAIAVHRQSESCFVQMAQFLEKMREARLGGKSDPTSELDDM LINVMVNYAKSLRYGSEHVYQSMPRLISLWLDTTENCTNSEQVKKMNDLLTNCCTALP TAIFYTVYSQMLSRLCHPLPEVFSVLRNVIIRLVEEYPQQSLWMLLPHFKSAKANRIK RCKLVLTDSRLQKAAFQKLLNDFNSLTERLIELTNKEVTLDRSYKLSDLDTRLTKLCN QPDFSSILLPFEKYMRPTLPMNSDTSISSTLSQLPTGSPAKANWFPYKQIYISGFQES VLILRSAAKPKKLTIRCSDGKDYDILVKPKDDLRRDARLMEFNGLVKRYLHQDAPARQ RRLHIRTYAVLPFNEECGLVEWLPNLASYRSICMSLYTQRGQVVSTRQLHQMAVPLHE SIERKREVFTKQLIPAHPPVFQEWLRQRFVTLHSWLEARNTYIRTVAVMSMVGYIVGL GDRHGENILFVEGNGDAVHVDFNCLFNQGELLAYPEVVPFRLTHNMIVAMGPLGVEGS YRKCCEITLRLLKQETKTLMSMLRPFVYDVGAQTRNAAATAKITKDVQRIADRLQGHV KRQQANSIPLSTEGQVNFLINEATKVDNLACMYIGWGAFL" misc_feature 2956..3273 /gene="mei-41" /note="Domain in UVSB PI-3 kinase, MEI-41 and ESR-1; Region: UME; smart00802" /db_xref="CDD:214825" misc_feature 5065..6063 /gene="mei-41" /note="FAT domain; Region: FAT; pfam02259" /db_xref="CDD:396714" misc_feature <6004..7665 /gene="mei-41" /note="Phosphatidylinositol kinase or protein kinase, PI-3 family [Signal transduction mechanisms]; Region: TEL1; COG5032" /db_xref="CDD:227365" misc_feature 6655..7458 /gene="mei-41" /note="Catalytic domain of Ataxia telangiectasia and Rad3-related proteins; Region: PIKKc_ATR; cd00892" /db_xref="CDD:270625" misc_feature order(6685..6687,6691..6699,6703..6705,6751..6753, 6757..6759,6766..6768,6871..6873,6907..6918,6931..6933, 7216..7218,7222..7224,7255..7260) /gene="mei-41" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270625" misc_feature 7192..7218 /gene="mei-41" /note="catalytic loop [active]" /db_xref="CDD:270625" misc_feature 7258..7326 /gene="mei-41" /note="activation loop (A-loop); other site" /db_xref="CDD:270625" polyA_site 7886 /gene="mei-41" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatttaaaga tgcaaatact aaatatcgcc cgccatggat gccggtagtg gtaaacaaat 61 gtgcggtaaa ttgtaaataa ctaaattaca aacaaaaccg gcaacatgtc gaaccaacgg 121 aaggacatgt ggaggctgct gtacaaccat gtgaaccgaa acgcgtcctg cctgtcccgc 181 gtgtacactg tgatcgagga catcctgtgc caggagccga gcctgataag ctgctcgctg 241 gtgcgggagc tgcacaacaa attccaggac accttcctcc tgtggctgct caacaagctg 301 gccaagtgcc tgagcgaggc tccagacggc agtcactgca tcaatctgca gaggaagatc 361 ctcagctcct gctgttccaa tcatcccaag ctgtacgagc gcctggtcct ggcctatgtg 421 gaggccctcg aggagacgca cctgcagctg agctccctgg acttcagtca agaatgtccc 481 gccataacca taactttgag catattccaa tgcgatgtgg cctgcctgca ggagttcgac 541 ccgcagtgcg ccttcgagga catcaggctt cccgtggagc aggctgacat gtatgccaag 601 agtctgctgg aggtcctgca gcacgcccac cacattggct atgccacgca cggcgacatt 661 ttcccggcca gtctgcacca ggccctgctg atcctcaagg agtgcgaaat ggacacgaag 721 ctggccagcc tgaactactg ccactgcgtc ctgggcctgc agtcgtccac tagctggtcg 781 accaacccgg atgtgggcca ctacgcccta ctgacgctgg aggcgacgac aatcatgtgg 841 tccaacgttc cgaagtggct ggaactgggc tgtatgacac gtcaggagct cagacagctg 901 aacacgacca ccaagcagct gctgctcgtc ctgcagaagc gcgctcgccc agttctccag 961 ctgggctacc tgctgctcaa cgagatcctc agcttgcccg ccgacatcga actggacgat 1021 gggctgctgg agaccctaac cgcctttatt cgaggccagc tggagcattc ggggacatcg 1081 ctggagcagc tggtgcactt ccagcagctt ttgttggccc attggcactc ccaccccgcg 1141 catttactgc ccatgctggc tgcgatggcc gtgaaacagg ctgagatgcg cacatcggtg 1201 gtgcaagtcc tgaccgaaag cctcgtatgc atcttgaaga gaaagcaagt ccaggccatg 1261 gaatggctcg agctggtagc cattttgcgc acctttaggc agctggaaca cctagtcctg 1321 gcacagagcc agcttaagac ggccgaaaac gaaggccaca tcgactccgc ggtgttggcc 1381 aagttgccgt tgcagtgcga aatagtcaag gtaatggacg ccaactggaa taacatttca 1441 atgcagatgg tcgagctgga atcgaagtgt ccctcggaca acgaggacat atatttggaa 1501 atatgctcgc ttctcatgca ggtctccttc attcggcatt tcttgaagac gcagacgcaa 1561 caccagctgt tggcaattct ccagcggcac atggagctgt cccacctgtg cgctattcgc 1621 ttggaaacgc cttcgagtgc gcacacccag atgcagggat tctatgccca gcactacctg 1681 ggtctcattc aatcggagga ggaggtgttc ctcaacaatc ttccgcaatt gtacattgcg 1741 ggctacatca agccggagca actgctcaaa tccctgccct ccattgccaa tcgtagggga 1801 cgcgcccatg tcctccgcct gctgctgtgc tcccagccag gcactttgag tgtcttcaag 1861 gaccaggagc gcattgagtt gtactgcccg aagtgcaggc gattgccgga aaaacttcca 1921 ggcatttacc tcgggaagtg caaacagcaa atggcgagtc tggacttttc aagcgcctcc 1981 ctcgcgttga tagccaaaga cttgctgtac gatcccgact tctcttacat atcccaccac 2041 ctggacctgc tgagcctgga tcccaacgtg atccatcgtc tgcttgggaa atcggaggga 2101 ctgcaaaggg ttagtgtgaa ggttctcggc cagctggtgt ccgcaatgcg ggccgtgtcg 2161 ccggacttca tggagaagtt cggccacctt gttctgggtg ccattaagga catgctgggc 2221 aagccgctgg ccgagcagaa cgtcttgcag cagcggcatg tgctcgacat actgattgcc 2281 atcgcgcaca cggaggacga tgagatctgg ctcttccact ggttcaagat gacattcttc 2341 ttcttggtgc acactcggtc gctggtggcc caagaggctg tgctggcggc cactgagatg 2401 tgtgccggcc acggcctgca gacgattaac ttgtggaact ggtacaagcg ggatgctctc 2461 gatctggccg ttcggctggc cctaaccggc tatctttcac acggcgttcg cttcacccga 2521 tcactccgag cgctcaccaa aatgctggga ttcacgtgcg tccaggagtt cacctgcaag 2581 taccaacgcc ttgtgaccgc catggtcctg ccgcactgca tccgggaacc gcgttgtaag 2641 ggagttttgg tactgatagc caagcagatg cggaaaccca ttgccacctg gttctccacc 2701 tcgttcctgc gcatctacac gcacgtctat ctgacccagg agccggagct ggccaacaag 2761 tgcatcgagc tggtggtcag ctgcacccag tcgagcctgc aacagctgat gaatgcagat 2821 gtgaagcaaa cggtggccga attgctaatt tactttaacc gaaaccccac tttcgtgatg 2881 cggtccttcc aaagcctctt acagttgacc atcggttccg aggaggagct gtccagccaa 2941 acggccaatg cggagtttgc caatttcatc gccgaacgtt ttctcggcgt gatcacgtac 3001 ttcgagagct gcctgagcga attggccttc gagaagccgc tgaaggagga gacactgtat 3061 agcttgggcc agataatgcg cttcgtgggc tcccagcacg tcacccagtt caggttcaag 3121 attatcgcca tgctgagctt cgttcatacc ctgcaggagc ctcgtctcca gcgcatttgc 3181 ctgaagatct ggcatatatt cctgcacgtc gtaaatgtgc aggagttggg accatcgctg 3241 ggaaggattg tggccacgtt gcagccgctg ctggcggaca gcgagagccg gaagcaggtg 3301 aacgatctgt acgagttcat aatcctgcgc aatgcatcca tgctaggcaa ctttgttacg 3361 gacctgtact tcctggatcg catggagcac gtcgcaccct cgatacagaa gtgcatcagg 3421 cggcacacgg cccatctgga cttgaagggc tcggcagagg aggagggtca gtcaagtgct 3481 gcgcctcaac tggcggaaca gttgcgtttc ctgcaaaagc acatcaccga cgagtgcctg 3541 caggtgcgcg tctatgccct ccagcaactt ggcgagcttt tcggacggcg acgtgaccag 3601 ctaaccagta cgatcctcag tgaagtgccc ctggaaccgc tgctggagca gattgtgaac 3661 gtcctgatgg ctggctgcca gcacgacgat ggccagctgc aaatggcctc ggccaagtgc 3721 ctcggggaac tgggagccat cgacgccagc tatctgcctt cgaactacaa cttcgccagt 3781 ccgcagccgg tgccgctcaa catattgtcc gacgactttg ccgtcctggc cctgaccgcg 3841 ctgtgccgcg gctatcagtt ccagcagaac accaagcacg tggacagctt ctcgctggcc 3901 atccaggaga cgctggcgac ctgcggcatc tcgcccaagg aacagaagaa ggtgcagctc 3961 tggcaatcgc tgccagcacg catgcggcag gtgatggagc cgatgctcca ctcctgctac 4021 acctgttgcc atcgcacgaa cacctgcctg cagcagccgc tctttggcag ccactactcg 4081 cacaacttct acgaggaatg ggcctttctc tgggccagtc gactgatcga ctacatcccg 4141 ccctcggaca cgcgccacct gctcagctcc tacaagccgt gcatcaagcg agatggcaac 4201 atgctgagca ccttctatcc gtacatcctg ctgcacgccc tgctcgagtg cacggcggag 4261 caggcggggc acatccagga ggagttcatg gccgtcctgc gagccaacga ggagagctcg 4321 agctctgtgc gcggacgtca ggagctgggg gccatcaagg agagtgcatt caagcaattt 4381 gagtcccgca agtatgccgc gggcatcaag ccatcgcaaa acagttcgat tttggagcgg 4441 aaggaggact ctagtcgggt tccccgcttg gccggcaagt tgtgcgccga actgttggac 4501 tttctgcagc gctggctcag ggagtggcag cgaattcatg gccgcagcac cgggggaaag 4561 cccccggaga cggtggatcc caactaccgg aagatccacg agttcctcaa gcggataccc 4621 aagctgttgg tgtcgcgtgc cagctacaat tgtggcgaat tcgctcgggc ccttagctat 4681 ctggagagct atctggacga gaagggtggc gaggacaaat cgaggagatt gttggaacaa 4741 ttcaccttcc tcgtggaggt gtacggttcg ctcagggact cggattcggt ggagggagcg 4801 gtgcaggtcc gcagctacga catgagcgtc acgcaggaca tcctcgtcaa ccgactggtg 4861 gagcggcagc aggacatgat cacctcttac gagcagctgc tctccagcac ggaccaaatg 4921 cagccggatc acgtgcgcgc catgatcgat gcctatctga gggacacccc gaagacggct 4981 cagttgattg ccgacggcct ctggcagcga ttgagtgacc agtactcgga gcagtgcttc 5041 gccgagtgca agtctgagct gctctggcgc ctgggcagct acgatgcgct ggaggagctg 5101 cagtccagct ggccagcgca gtgttcccag ggctgtctga agctgcgcag gcccctgacg 5161 acacggaccg aattcgacac attgctggac gggatgcggg gatcggtgct ggaggagctg 5221 cgcagctgct cggccgtgca gcagcactcg tacgccaatg cctacgatgc ggtgttgaag 5281 ctgcacttgg tgcacgaact gcagtgcagc cagctgcttg tggagaatct cgaacaggat 5341 cgcgaccggg acagtcagga aaggctcatg gagaagtact tcaaggactg gcaatatcgc 5401 ctgcaggtga tacagccgca agttcgcgtc caagagtcca tatacagctt ccgtcgtaat 5461 atactggcgg agcttcaacg ccgcctggcc gatcgtcccc acctgctgcc ccacttgcag 5521 acagagctgg cgaggatctg gctaaacagt gcccaaatca atcgcaatgc cggtcagctg 5581 cagcgcgctc aactgtatat tctgaaggcg tcggaataca agcccaccgg cctcttcatc 5641 gagcgcgcca agctgctgtg gcaaaagggc gaccaggtga tggccatgaa ctacctggag 5701 gagcagctgt ccatcatgcg ttccgagtgc cagggcaact ttaagcagct gccgccggag 5761 cagcggcatc tcttcttccg cggcaagtac ttgcaggccg tgtacagtgc cgagtcgatg 5821 cacctgtgcg ccgatgctgt tttgaaatac ttcgaggagg caattgccgt gcatcgccaa 5881 tcggagagct gcttcgtgca aatggcccag tttctggaga agatgcgcga ggcccggctg 5941 ggtggtaaat cagatcccac aagtgaactg gacgacatgc tgatcaacgt gatggtcaac 6001 tatgcgaagt cattgcgtta tggcagcgag catgtctacc agtcgatgcc ccggctgatt 6061 agcctgtggc tggacaccac cgagaactgc accaacagcg agcaggtgaa gaagatgaac 6121 gacctgctga cgaactgctg cactgccctg ccgacggcca tcttctacac ggtgtactcc 6181 cagatgctga gtcgcctctg ccacccgctg ccggaggtct tctccgttct gcgcaatgtg 6241 ataattcgcc tggtcgagga gtatccgcag cagtcgctct ggatgctgtt gccgcacttc 6301 aagtcggcca aggccaacag gatcaagcgc tgcaaactgg tgctcaccga cagtcgtttg 6361 cagaaggccg ccttccagaa gctgctcaac gacttcaact cgctgacgga gcgtctcatt 6421 gagctgacca acaaggaggt aacgctggat cggtcgtaca agctgagcga cctggacacg 6481 cgcctcacca agctgtgcaa tcagccggac ttttcgagta tactcctgcc cttcgagaag 6541 tacatgcggc caacgctgcc gatgaattcg gacaccagca tctcatctac gctgtcgcag 6601 ctgccgacag gaagtccggc gaaggccaac tggtttccct acaagcagat ctacatcagc 6661 ggcttccagg agtcggtgct gatcctgcgc tcggcggcga agcccaagaa gctgaccatt 6721 cggtgcagcg atggcaaaga ctacgacatt ttggtgaagc ccaaggatga tctgcgtcgc 6781 gatgcccgcc tgatggagtt caatggcctg gtcaagcggt atctgcacca ggacgctccg 6841 gccaggcagc ggcgtctcca catccgcacg tatgccgtgc tgccgttcaa cgaggagtgc 6901 ggcctggtcg agtggctgcc caatctggcg tcgtaccgga gcatctgcat gagcctgtac 6961 acccagcggg gacaggtggt gtccacccga caactgcatc agatggccgt gccactgcat 7021 gagtccatag agcgcaagcg ggaggtcttc accaagcagc taatacctgc ccacccgccg 7081 gtcttccagg agtggctgcg ccagcgattc gtcaccctgc acagttggct ggaggcgagg 7141 aacacctaca ttcgcacagt ggccgtcatg tcgatggtgg gctacatcgt ggggctgggc 7201 gatcgccacg gcgagaatat cctgttcgtc gagggcaacg gcgacgccgt ccacgtcgac 7261 ttcaattgcc tgttcaatca gggcgagctg ctggcctatc ccgaggtggt gcctttccgg 7321 ctcacccaca acatgatcgt ggcaatggga ccgctgggcg tggagggcag ctaccgcaag 7381 tgctgcgaga tcacgctgcg cctgcttaag caggagacca agaccctcat gtccatgctg 7441 aggcccttcg tctacgacgt gggagcgcag actcgcaatg cagccgccac ggcgaaaata 7501 acaaaggatg tccagcgtat tgccgatcgc ctgcagggac atgttaaacg ccagcaggcc 7561 aacagcattc ctctttcgac cgaaggacag gtaaactttc tcataaacga ggcaaccaag 7621 gtggacaatt tggcatgtat gtacattggc tggggagcat ttctttaaac gattgccaac 7681 aaatactggt actctacaga ttgtctcctc taatatgtgt aaataaatgt ggttccttgt 7741 taagtcgaga tagtttagat gtaactatat acatttttaa ttcgaattct tgtcctctgt 7801 tgtaaagctc ctattcaatg taaaacaata acctacctaa tttgagtaat aacaacattc 7861 agaattgaag agtgtcaaac atttaa