Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017150654 2085 bp mRNA linear INV 09-DEC-2024 arthropod-specific, member 9 (SmydA-9), mRNA. ACCESSION XM_017150654 VERSION XM_017150654.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017150654.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2085 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2085 /gene="SmydA-9" /note="SET and MYND domain containing, arthropod-specific, member 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063530" CDS 248..1735 /gene="SmydA-9" /codon_start=1 /product="SET domain-containing protein SmydA-8" /protein_id="XP_017006143.2" /db_xref="GeneID:108063530" /translation="MICPKRTSELLDLHLAPFKDKDPAWEIGVSRIAGRGVVATRSLK RGEIIFRDSPLLIGLAAHEEDSLNACSVCLKMLPDTRFMCRQGCGLPICALCAKKKVH KSDCDLFKSWGPNEPDVANSVIIRLLCVARAINLSKEQRDLIYCLQANLDNNHRTEVR NAAKCFKNFPTDKKLIEIMNRTVAVLRTNGFDKTTDRTNDNQEFNYRALYPLFGVVNH DCIPNAYYTFEEKTNNMIVRAAIDIPEGFEVTTTYTKLFTGNIARHLFLKMKKGFTCK CPRCSDPTEKGAFISGLYCRDTNCTGLVVPEISGLPHPNWNCLECKQKSTHAQMMKSQ DFASGAINAKANSNSLRTLVQYLNEKSDAFIPSSNYVVIDAKMSVLQRLQQGREDCSE ELANNTRLRYSRDITQVMDKLGLGDSLLRSHLEEQLRREEERRAKRLADEAEKQRKLA ELQAKAAEADKLLEVLEKEQQEQQEQKEAAAGTADPGTAPAPPPA" misc_feature <794..1087 /gene="SmydA-9" /note="SET domain (including SET domain and post-SET domain) found in SET and MYND domain-containing protein, and similar proteins; Region: SET_SMYD; cd20071" /db_xref="CDD:380997" misc_feature order(812..817,857..859,887..901,1004..1006,1010..1012) /gene="SmydA-9" /note="active site" /db_xref="CDD:380997" misc_feature order(812..817,857..859,887..889,1001..1006,1010..1012) /gene="SmydA-9" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:380997" misc_feature order(905..907,1070..1072,1076..1078,1085..1087) /gene="SmydA-9" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:380997" polyA_site 2085 /gene="SmydA-9" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggaaaacggc gacagtttac tcacggcagt cgcgaaccaa acgctgcagg cgaatcgaat 61 ttttgggcag agaagaaaag cgatcaaatc tagagatcat aagagattgt gttaaggaaa 121 gaggaggatt ccttgtgata atattttttg ttcgagtgcc acggttgaaa aactcgcttg 181 ttttttgagt gacgcgtacg tttaaagtcc ttccaaaaac ccaaaaaaaa aacccgaaaa 241 acccgagatg atctgcccga aacgcacctc ggagctgctg gacctccact tggcgccgtt 301 caaggacaag gatcccgcct gggagatcgg agtgtcgagg atcgcgggac gcggagtggt 361 ggccacgcgg agcctgaaga ggggcgagat tattttccgg gacagcccgc tgctcatagg 421 attggcggcg cacgaggagg actccctgaa tgcgtgcagt gtgtgcctga aaatgcttcc 481 cgatacgcgg ttcatgtgcc gccagggatg cggtctaccg atctgcgccc tgtgcgccaa 541 gaagaaggtc cacaagagcg actgcgatct cttcaagagc tggggaccca acgagccgga 601 tgtggccaat tcggtgatca tccggctgct ctgcgtggcc agggccatta atttgagcaa 661 ggagcagcgc gatctgatct actgcctgca ggccaatttg gacaacaacc atcgcaccga 721 ggtgaggaac gcggccaagt gcttcaagaa cttccccacc gacaagaagc tcatcgagat 781 catgaaccgc actgttgccg ttttgaggac caacggcttc gacaagacca ccgaccggac 841 gaacgacaac caggagttca actacagggc cctctatccg ctctttgggg tcgtcaacca 901 cgactgcatt cccaacgcct actacacctt cgaggagaag accaacaaca tgatcgtccg 961 cgccgccatc gacatccccg agggattcga ggtgaccacc acctacacca agctcttcac 1021 cggcaacatc gcgcgccacc tcttcctcaa gatgaagaag ggcttcacct gcaagtgccc 1081 gcgatgctcc gatcccacgg agaagggcgc cttcatctcg ggcctctact gccgggacac 1141 gaactgcacg ggcctggtgg tgccggagat ctccgggctg ccgcatccga actggaactg 1201 cctggagtgc aagcagaagt ccacgcatgc gcagatgatg aagtcgcagg actttgccag 1261 cggcgccatc aacgccaagg ccaattcgaa ttcgctgcgc accctggtgc agtatctcaa 1321 cgagaagagc gacgccttca tcccgagctc caactacgtg gtgatcgatg ccaagatgtc 1381 tgtgctgcag cgactgcagc agggacgcga ggactgctcc gaggagctgg ccaacaacac 1441 gcggctccgc tacagccggg acatcaccca ggtgatggac aagctgggtc tgggcgacag 1501 cctgctgcgc agccacctgg aggagcagct gcgtcgcgag gaggagcgcc gggccaagcg 1561 gctggcggac gaggccgaga agcagcgcaa gctggccgag ctgcaggcca aggccgccga 1621 ggcggacaag ctgctggagg tcctggagaa ggagcagcag gagcagcagg agcagaagga 1681 ggcggcagcg ggcacagctg atcctggaac ggctcctgct cctccgccgg cttagatgct 1741 caccggtatc cagccacctt tgccaggact cgagtaatct gaaacagttg tgtgtgtcta 1801 catagataaa aaaggttttc aagaacttaa attaaattat taaaaatata ttagcagtga 1861 aaatattttc aataatattt aaaatattat attaaacaca gctgtgagtt caagaactca 1921 agatcccgaa agacgtggct tcatacaaac gtggcttcaa gtgtagtccc cccaaaacag 1981 tcctctggcc acctctccta gttctgtgtt gtgcgtacta aactaaataa ttgtatctgt 2041 atttgtattt atttatttat aataaattaa aaattatata ctcga