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LOCUS XM_017150618 2829 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017150618 VERSION XM_017150618.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017150618.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2829 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2829 /gene="Ir8a" /note="Ionotropic receptor 8a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:108063503" CDS 1..2829 /gene="Ir8a" /codon_start=1 /product="glutamate receptor ionotropic, kainate 3" /protein_id="XP_017006107.2" /db_xref="GeneID:108063503" /translation="MELLLMVMVHLLFLPANAEVLKLTFWIEPVQRADFDADMVVVLK ELEALRLDVRIADTSLTLTRSEDGLDMQRFCEILSSVGTSAVIDLTYRHWEEGYDLVR SLGIGYVRLERLMRPFLDMFGDFMRQKRANNVAMVFMNARDTGEAMQQMLIGYPFRTI ILDASQTDPGQNFLDRIRSLRPPPTYVALFARAAAMNGLFDKVQKAGLFQRPLEWHFV FLDTRDRVFKYRRQAELCTRFTLSPRAICRSMPMPDLYCGSGFTIQRAMLLNVLRSLI NAAQVSPLYPSGIYQDCNATAMSSSSEVSGDDLPDDDHNWLDMVHWSNFLAYASPPPR VQDQSGSPLPGLTFAVNISAGYWSSEHEAKTDLAAWSSVAEMRLLNETISPARRFFRI GTAESIPWSYLRRNERTGELLRDRSGSPIWEGYCIDFIVRLSQKLNFEYEILAPAVGH MGEVNERGEWDGVVGDLIRGETDFAIAALKMYSEREEVIDFLPPYYEQTGISIAIRKP VRRTSLFKFMTVLRVEVWLSIVAALVGTAIMIWFMDKYSPYSSRNNRAAYPYACREFT LRESFWFALTSFTPQGGGEAPKAISGRMLVAAYWLFVVLMLATFTANLAAFLTVERMQ TPVQSLEQLARQSRINYTVVRDSDTHQYFVNMKFAEDTLYRMWKELALNASKDFKKFR IWDYPIKEQYGHILLAINSSQPVADAREGFANVDAHENADYAFIHDSAEIKYEITRNC NLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILELQKDRFFEELKAKYWNQSNLHNCP LSEDQEGITLESLGGVFIATLFGLILAMMTLGMEVMYYKKKQRSTLQITQVRPVDESG DSSTAPPTASSTTKQAWHMPNPEEQKEKEQKDKQVSPPPSFEAATFRGKKLPARITLG DGKFKPRQGLYARKNLGATDSSQGGYME" misc_feature 1159..2370 /gene="Ir8a" /note="The ligand-binding domain of putative ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily; Region: PBP2_iGluR_putative; cd13717" /db_xref="CDD:270435" misc_feature order(1258..1260,1294..1296,1306..1308,1444..1449, 1456..1458,1471..1482,2251..2253,2305..2310,2317..2334, 2338..2340,2347..2349) /gene="Ir8a" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:270435" misc_feature order(1351..1353,1432..1440,1453..1455,1930..1932, 1939..1947,2182..2184,2260..2262) /gene="Ir8a" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:270435" ORIGIN 1 atggagctgc tactaatggt aatggttcat ctgttatttc taccggccaa cgcagaggtt 61 ctcaagctga ccttttggat cgagcccgtt cagcgggcgg acttcgatgc ggacatggtg 121 gtggttctca aggaactgga ggcccttcgt ctggatgtta ggatcgccga cacgtccttg 181 accctgaccc gctcggaaga tggtttggac atgcagaggt tctgtgaaat cctatcgagt 241 gtcggcacca gcgccgtaat cgacctgacc taccgccact gggaggaggg ctacgacctg 301 gtccgctccc tgggcatcgg ctacgtgcgt ctggagcggc tgatgcgacc cttcctggac 361 atgttcgggg actttatgcg ccagaagcgg gccaataacg tggccatggt cttcatgaat 421 gcccgcgaca ccggcgaggc catgcagcag atgctcattg gctatccctt ccgcacgatc 481 atcctggacg ccagtcagac cgatcccggc cagaatttcc tcgatcgcat ccgctcgctg 541 cgcccgccgc ccacttatgt ggccttattc gcccgggcgg ccgccatgaa cggacttttt 601 gacaaggtcc aaaaggctgg actcttccag cgtccgttgg agtggcactt cgtgttcctg 661 gacactcggg atcgggtatt caagtaccgc cggcaggcgg aactgtgcac ccggttcaca 721 ttgagtcctc gggcaatctg ccggtcaatg cccatgccgg atctttattg cggaagtgga 781 ttcacgatcc agcgcgccat gctgctgaat gtgctgcgca gcctgataaa cgcggcgcag 841 gtgagtcccc tgtatccatc gggcatttac caggactgca atgccaccgc catgtcctcc 901 tcctcggagg tatctgggga tgatctcccc gatgacgacc acaactggct ggacatggtg 961 cactggagca acttcctggc ctacgcctcg ccgccgccgc gcgtccagga tcaatccggt 1021 agccccctgc ccggcttgac cttcgcggtg aacatctcgg ccggctactg gagctccgag 1081 cacgaggcca aaacggatct ggccgcctgg tcgtcggtgg ccgagatgcg gctcctcaac 1141 gagacaatca gtcccgcgcg tcgcttcttt cgcatcggca cagccgagag cattccgtgg 1201 agctatttgc gtcgcaacga gcgaaccggt gagctgctcc gcgatcgcag tggttcgccc 1261 atctgggagg gctactgcat tgactttatc gtgcgactct cacagaagct caactttgag 1321 tacgaaattc tggcgcccgc tgtggggcat atgggcgagg tgaacgaacg cggcgaatgg 1381 gatggcgtgg tgggtgattt gattcgtggt gagactgatt tcgccattgc cgcgttgaag 1441 atgtattcgg aaagggagga ggtgatagat tttctacctc cttactacga acaaacgggc 1501 atttcgattg ctattaggaa acctgtgcgt cggacttcgc tattcaaatt catgaccgtt 1561 ctgcgcgtgg aggtctggct gagcatcgtg gcggcgctgg tgggcacggc cataatgatc 1621 tggttcatgg acaagtactc gccgtacagc tcgcggaaca atcgggctgc ttatccgtat 1681 gcctgccggg agtttacttt gcgggagagc ttttggtttg ccctcacctc gtttactcca 1741 cagggcggcg gcgaggcacc caaggcgatt tcgggtagga tgttggtggc tgcttactgg 1801 ctgttcgtag tcctcatgct ggccactttt accgccaatc tggccgcctt tctcaccgtg 1861 gaacgcatgc agacgcctgt tcagtcactg gagcagctgg cccgccagtc gaggatcaac 1921 tacaccgtgg tcagagattc cgatacccat cagtatttcg tgaatatgaa gttcgccgag 1981 gatacgctgt accggatgtg gaaggagctg gctttgaatg ccagcaagga ctttaagaag 2041 tttcgcatct gggattatcc tattaaggag caatatggac acatcctgct ggccatcaac 2101 agttcgcaac cggtggcgga tgcccgggag ggattcgcca atgtggatgc ccacgagaat 2161 gccgactatg cgtttatcca tgactcggcg gagatcaagt acgagatcac gaggaactgt 2221 aatctcaccg aggtgggcga ggtgtttgcc gagcaaccat atgccgtggc cgttcagcag 2281 ggcagccatt tgggcgacga actgagctat gccatcctcg aactgcagaa ggatcggttc 2341 ttcgaggagc tgaaggccaa gtactggaac cagtcgaatc tgcacaactg tccgctgtcc 2401 gaggaccagg agggcatcac tttggagagt ctgggcggcg tcttcatcgc caccctcttc 2461 ggactcatcc tggccatgat gacgctcggc atggaggtga tgtactacaa gaagaagcag 2521 cggagcacgc tgcagatcac ccaggtgcgt ccggtggatg agtctggcga ttcctcgact 2581 gctccgccca ccgccagcag tacgacaaag caggcgtggc acatgcccaa tccggaggag 2641 cagaaggaga aggagcagaa ggataagcag gtgtcgccac cgccctcctt cgaggcggcc 2701 acctttcggg gcaagaaact gcccgcccgg atcaccctgg gcgatggcaa gttcaagccg 2761 cggcagggac tatacgcgcg gaagaacctc ggtgccaccg actcctccca agggggctac 2821 atggagtaa