PREDICTED: Drosophila takahashii TM2 domain-containing protein 3

LOCUS       XM_017150610            1230 bp    mRNA    linear   INV 09-DEC-2024
            almondex (amx), mRNA.
ACCESSION   XM_017150610
VERSION     XM_017150610.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017150610.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1230
                     /gene="amx"
                     /note="TM2 domain-containing protein 3 almondex; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:108063497"
     CDS             89..949
                     /gene="amx"
                     /codon_start=1
                     /product="TM2 domain-containing protein almondex"
                     /protein_id="XP_017006099.2"
                     /db_xref="GeneID:108063497"
                     /translation="MRLQRQCIVVNMRSAIVLIAIFVLTGIRNSETASGGNQMDLSDA
                     KGDHKDNSNASNGNPNENEVYVPPVVVKSSGGGGSGGGGGATGGLLDNITAYSSSSSN
                     GNSNNNNMLCPYDKETPCDRLHFPCIRCNYNHGCIYGRDVNVTCEVIQNVQCQGERQF
                     QRQMNCRYCYQTEMWQQSCGQRSSCNSASDKPFRTNCTVHQDVLCLGNRSFTRNLRCN
                     WTQGYRWSTALLISLTLGGFGADRFYLGHWQEGIGKLFSFGGLGVWTIIDVLLISMHY
                     LGPADGSLYI"
     misc_feature    749..898
                     /gene="amx"
                     /note="TM2 domain; Region: TM2; pfam05154"
                     /db_xref="CDD:428337"
     polyA_site      1230
                     /gene="amx"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tacggtccta cactgccacc agaactcgga gcacccgcac ccatcgaaac caaaataaca
       61 ataacatacc gcttttcgtg gcccaaaaat gaggctccaa cggcagtgca ttgtggtcaa
      121 catgcgatcg gccatcgtgc tcatcgcgat cttcgtgctg acggggatca ggaacagcga
      181 gacggccagc ggaggcaacc agatggattt gtcggacgcg aagggcgacc acaaggacaa
      241 cagcaatgcg agcaatggga atcccaacga gaacgaggtg tatgtgccgc cagtggtggt
      301 taaaagcagt ggaggaggag gcagcggagg aggcggcgga gcaacaggtg gactcctgga
      361 caacatcacc gcctacagca gcagcagcag caatggcaac agcaacaaca acaacatgct
      421 gtgcccctac gacaaggaga cgccctgcga tcgcctgcat ttcccctgca ttcgttgcaa
      481 ctacaaccac ggctgcattt acggtcggga tgtgaatgtc acctgcgagg tgatccagaa
      541 tgtccagtgc caaggggagc ggcagttcca gcggcagatg aactgccgct actgctacca
      601 aacggagatg tggcaacaga gctgcggcca gcgttccagc tgcaactccg cctcggataa
      661 acccttcagg accaactgca cggttcacca ggatgtcctc tgtctgggca atcgatcctt
      721 cacccgcaat ctgcgctgca attggacgca gggctatcga tggagcactg ccctcttaat
      781 tagcctcact ctcggtggct ttggggcgga tcgcttctat ttgggccact ggcaggaggg
      841 gatcggcaag ctgttcagct tcggcggcct cggcgtgtgg accatcatcg atgtcctgct
      901 catttcgatg cattatctag ggccagcgga tggttcgctg tatatataag ctgggattac
      961 taggataacc agggaaaggg aatccacggg gaagactgta ggccaaaagt ttagatcata
     1021 agctaaatgt ttccattacc atgtaaataa atacgagggc atatttaacc attaaataat
     1081 atagcaattt taacgagaat tcttcaatta gaagcttgta cataaataat tgaaaagtgt
     1141 aatctattaa gaatattatg tattatccat tgatcgtacc aataaaaagg cgaaagagat
     1201 attatagcca tctctttctt attcctgtaa