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LOCUS XM_017150224 5300 bp mRNA linear INV 09-DEC-2024 (LOC108063202), transcript variant X1, mRNA. ACCESSION XM_017150224 VERSION XM_017150224.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017150224.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5300 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5300 /gene="LOC108063202" /note="uncharacterized LOC108063202; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063202" CDS 126..5264 /gene="LOC108063202" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_017005713.3" /db_xref="GeneID:108063202" /translation="MSRSRGKTGPNGSVDCNTRSPRNIQMPRCPSRGADLVSTPEHLR PGFRGRTHRYDPSDFGLTGNEEWRHPRMFRDMTYETDAAAMETFRQAQPRRQPYETGI NLSNLPEECLADMSAPGFDLSLPSQMSDLRGEQLDDVSAPNLCDASNVSKTTSHVDNV YGEILDRFRSIRERINRANQLHGSEDPCYQQTTRRRIYTHRDPSGHITSHVVETTVSN TSSLDCTPAGEAGEPGRRLNFSLPNRSEQLMDESMPPYLECPEVVSSQDILDNETMPA FESTARSQNMSLRSCLENETMPSFANISGVSRRQRTMPSECLDDVSQPSFARSRSSRS GRLSRSRRQSPRRQLQNLWDTSARNATTNECLEDISMPALEGVSNVSRSRGQRSRIQN ISSRRECLDDMTMPSFGGVSNLSTNQSRRQLQRSMSTQNINDTSEPMYASFSRGPMTN ECLEEVTMPSLVETSSRRPRSVGMPNECLEDMTMPSFGGVSRASRSRSLDRQHNNKSM PTRMTNECLDDMTMPSFGGVSGSSRRQMTIPSEVSSRGTSRRQRTVPSAFANSTKYGD TLPNECLEDVSMPSFGGVSGASRRKGSRRKQMTLPSQNIGDISAPSFASSGRGNTTNE CLEDISMPSFGGVSTNSRSRSRRGQKTSRRRSVTKECLDDMTMPSMGGVSVSVPSRRP MTLPSECLDDVSAPSFGRSLSRGDASRRQQQIPCASSTRCPPTNECLEDVTMPSFGHI SAASVRRQLTMPSECLEDMSGVSGPSRRRQTTGLPNECLDDVSMPTFGNISGISAYGK SRSVERSKQNLSRSQAANECLEDVTMPSFGGVSGVSRRKSISRHQRSVPPVSTNNECL EDVTMPSYEGASRASRVRSPRQRAMTSECLDDETMPSFGDVSQPSGRRTPRRQTQNIS GPKFDTNECIEDISMPSYAENSRASRAKSSSRLQRSRQGAMTNECLDEVTMPSFGQAS SRGPLTSECLEEISMPSYRENSRSFQRRCPTPKQSSRQECLDDVTMPSFGSSRRGLTT NECLEDISMPAYGEPTGSSRGRSQMHSFRQGTMTNECLNDMTMPSYATSYRGPVTNEC LEDISMPSYRSSRGKSPRRRSRQRLDDMTMPSFGMNADECLEDMSMPSYGGNSGLSRG MQRSMTMECLEDMTMPPYGGDSESSRGRSPRFEAMTNECLDDMTMPSHEDSGSVRGRT PKQIQIFQGAMTNECLDNMTMPSFGTSSRHRDTNECLADISMPSYGRNTISFPGRSPA TPRQRSRQEMMTNECLDDMTMPSYGEVFGLSRRQMSLPSERLNDVSEPSFARSTSEAT SRRQRNSSRSPRPPPPQNSVTNECLEDMTMPTFGDISGSSRRGQVGMNSTRLEDISMP SGLSNRSQCTEDNASGGRRLEDASAPSRMTSRRYPQLTNECLEDVSMPPDESFGRNDS KPIARRPADISYPSEMLANESAPSYHSRRDEADKSADCSCSSPQQSSRGRSTGRLEDV TMPTFDDVSYQPRRHQLTMPCENLDDQTQPDFFNSTALPSSTRAEGKHQGKSQKNLAD ESAPSILKDSSKGPSEVVKEVTVQSSTTSVTRVFNSSAETNANNSGQPMIEDLSMPQF ESTGTSQAHQDSSLHGFQSMDNYRPFDELIYSQNSVGNQTQPQTPQPVRSANRSRSVR RTPSTSTNRAGTPSSATGIPGQPCDMITTNYPYGKPHCFSRKPC" polyA_site 5300 /gene="LOC108063202" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctgacttacc attcgacgga tttccctata attttctaca cctcacgaac actttccctc 61 tgattcggaa ccagatattc ccagcccggc tgaatgccga accagtaaga cattatacgg 121 ataggatgag taggagcaga gggaaaaccg gtccgaatgg gtctgtggat tgcaacacga 181 gaagccccag aaatatccag atgccgcgct gtccctctcg aggtgccgat ttggttagca 241 ctcccgagca tctgcgaccg ggatttcgtg gacggaccca tcgatacgat cctagcgatt 301 tcgggctgac gggaaatgag gaatggcggc atccacggat gttcagggat atgacctacg 361 agacagatgc tgcggccatg gaaaccttcc gccaggctca accacgtcgt cagccctacg 421 aaacggggat aaacctgagc aatttgccgg aggagtgcct ggcggatatg tcggcgcctg 481 gcttcgatct cagcctgcca tcgcagatgt ccgatttgcg gggcgagcaa ctcgacgatg 541 tatcggcccc caacttgtgc gatgcctcaa atgtgtcgaa gaccaccagc cacgtggaca 601 atgtgtatgg cgagattctg gatcgcttta ggagcatcag ggaacgtatt aatcgggcca 661 accagctgca cggatcggag gatccctgct atcagcagac cacgcgacga aggatctaca 721 cccatcgcga tcccagtggt cacatcacca gccacgtggt cgagacgact gtctcgaata 781 cttcctcgct ggattgcacg cccgccggtg aggctggtga accgggacga cggctcaact 841 tctccttgcc aaaccgatcg gagcagctaa tggatgagtc aatgcccccg tatctcgaat 901 gcccggaggt ggtgtcctct caggatattc tggataacga gacaatgccc gctttcgaat 961 ccacagcgag gagtcagaat atgagtcttc gttcctgtct ggagaacgag acaatgccgt 1021 cgtttgcaaa tatctctgga gtgtcacgaa gacagcggac aatgcccagc gaatgcctag 1081 acgatgtgag ccagccctcg ttcgcaagga gtagatcgag tagatcgggt aggctgagca 1141 gatctcgcag acagagtccc agaaggcagc ttcagaacct ttgggacaca tcagccagga 1201 acgcgactac caatgaatgc ctggaggaca tttcaatgcc cgcccttgag ggcgtctcga 1261 atgtttccag gagcagaggt cagagatcca ggatccagaa tatatcttca aggcgcgaat 1321 gcttggatga catgaccatg ccctcgtttg gtggagtatc caacttgtcg acgaaccaaa 1381 gtcgccgcca actgcaaaga tcgatgtcaa cgcaaaacat taacgatact tccgagccca 1441 tgtatgcgag tttttcaaga ggacccatga ctaatgaatg cctagaggaa gtcaccatgc 1501 catcactcgt tgaaacatcg tctagacgac cgcgatccgt gggaatgccc aacgaatgtc 1561 tggaggatat gacaatgccc tcatttggtg gcgtttcgag agcctcgaga agcagaagtc 1621 tggatcgtca gcacaacaac aaatccatgc caacgcgaat gacgaacgag tgtttggatg 1681 atatgaccat gccgtcgttt ggtggcgttt caggctcctc ccgaaggcaa atgaccattc 1741 cgagtgaggt gagttcccga ggaacgagtc gaaggcagag gactgtgcct tctgcgttcg 1801 ccaactccac caaatacggg gacactctac cgaatgagtg cctggaggat gtgtcgatgc 1861 catcttttgg cggagtttcg ggggcgtcgc ggaggaaggg atcccgacga aagcagatga 1921 cgctaccctc gcaaaatata ggtgatattt cggctccctc gttcgcaagc tcgggcaggg 1981 gcaatacgac caatgaatgc ttggaggaca tatcgatgcc ttcgtttggc ggagtgtcca 2041 ccaattccag gagcagaagt cgaagaggcc aaaagacttc aagacgtcgt tcggtgacca 2101 aagagtgtct ggatgacatg acaatgccct cgatgggtgg agtatctgta tctgttccat 2161 cgcgaagacc aatgaccctg cccagtgagt gcctggacga tgtgagtgcc ccgtcctttg 2221 gaagaagcct gtcgcgaggt gacgccagta gaaggcagca gcagatccca tgtgccagct 2281 ccaccagatg tccgccgacg aacgagtgtt tggaggacgt gacgatgcca tcatttggtc 2341 atatctccgc ggcctccgtc cgccgacagt tgacgatgcc cagtgagtgt ctggaggaca 2401 tgagtggggt ctctggtccc tccagaagac gacagaccac tggcttaccc aacgagtgcc 2461 tcgatgacgt gagcatgccc accttcggca acatctccgg aatatctgca tatgggaaaa 2521 gtagatcggt tgaacgatct aagcagaact tgagcagaag tcaggctgcc aatgagtgct 2581 tggaggatgt aacaatgcct tcctttggtg gagtatcagg tgtttccagg aggaaaagta 2641 tctcacgaca tcagagatcc gtgccaccag tgagtactaa taatgaatgt ctagaggatg 2701 tgacaatgcc ttcgtatgaa ggagcatcgc gagcatccag agttagaagt ccacggcaaa 2761 gagcgatgac aagcgaatgt ctggatgacg agacaatgcc atccttcgga gatgtttcgc 2821 agccctcggg tcgaaggact cccagaagac agacccagaa tattagcgga ccgaaattcg 2881 ataccaatga atgtatcgag gacatttcga tgccttcgta tgctgaaaat tcacgagcct 2941 cgcgggcaaa gagctcttcg aggttacaaa ggtcgcgaca aggagcgatg accaacgaat 3001 gtctggatga ggtgacaatg ccatcgtttg gtcaggcctc aagtcgaggt ccactgacaa 3061 gcgaatgtct cgaggaaatt tcaatgcctt cgtacaggga gaattcaaga tcgtttcagc 3121 gaagatgccc cactccaaag caaagctcaa gacaagagtg cttggatgat gtgaccatgc 3181 catcatttgg aagctcaaga cgcggactga ccaccaatga atgcctcgag gacatttcca 3241 tgccagcgta tggagaaccc accggatcgt ccaggggaag aagtcaaatg catagcttca 3301 gacaaggaac gatgaccaat gagtgcttga atgacatgac catgccatca tatgccactt 3361 cgtaccgagg acctgttact aacgagtgcc tcgaggacat ttcaatgcct tcatacaggt 3421 cgtcgagggg aaaaagtcca aggcgaagat ccagacagcg tttggatgac atgacgatgc 3481 catcatttgg tatgaatgcc gatgaatgcc tagaggacat gtcaatgcct tcgtatggtg 3541 gaaattccgg attgtccagg ggaatgcaaa gatccatgac gatggaatgc ttggaggata 3601 tgacgatgcc accctatggt ggcgattcgg aatcatccag aggaagaagc cccagatttg 3661 aagcgatgac caatgaatgc ttggatgaca tgaccatgcc gagccatgag gattcgggat 3721 ctgttcgagg cagaactccg aagcaaatcc aaatattcca gggagcaatg accaatgaat 3781 gcttggataa catgaccatg ccatcgtttg gaacttccag ccgccatcgc gatacaaacg 3841 aatgcctcgc ggacatctcg atgccttcgt atggaagaaa taccatctcc ttcccgggca 3901 gaagccccgc caccccaagg caaagatcca gacaggaaat gatgacaaac gagtgcttgg 3961 atgacatgac catgccatcg tatggcgaag tatttggttt atcccgccgc cagatgagtc 4021 tgccaagtga gcgattgaac gacgtcagtg aaccctcctt cgcaaggagc acttccgagg 4081 ccaccagtcg gaggcagaga aactccagca gaagccccag gccgccaccg ccgcaaaatt 4141 cggtgacgaa tgagtgcctg gaggatatga caatgccaac attcggcgac atctctgggt 4201 catcgcgacg tggccaagtc ggcatgaaca gcactcgcct ggaggacatc agcatgccct 4261 cgggcctatc gaatcgcagc cagtgcaccg aggataatgc gagtggagga cgtcgcctcg 4321 aggatgcgag tgctcccagt cgaatgacct caagacgcta tccccagttg acaaacgagt 4381 gtttggagga tgtttccatg ccgccggatg aatcatttgg caggaacgat tcgaaaccaa 4441 tagcgcgacg tccggcagac atttcctatc cctcggaaat gttggccaac gagagtgctc 4501 cctcgtatca ctcacgacgg gatgaagccg acaagtcggc cgactgttcg tgctcatcgc 4561 ctcagcagag ctccagaggt cgtagtacag gtcgtttgga ggatgtgacc atgcccacct 4621 tcgacgacgt ttcctatcaa ccgcgtcgcc atcagctgac catgccctgc gagaacctgg 4681 acgatcagac ccagccggac ttcttcaact ccacggcatt gcccagttct acgagggccg 4741 aggggaagca ccaggggaag tcgcaaaaga acctggccga cgagagtgcc ccatccatac 4801 tgaaggactc ctcaaaggga ccttccgaag tggtcaagga ggtgaccgtt caaagctcga 4861 ccacctcggt gacgcgggtc ttcaacagct cggccgaaac gaatgccaac aactcgggac 4921 agcccatgat cgaggacctc tcgatgccgc agttcgagtc cacgggcact agtcaggccc 4981 atcaggattc atccctgcac ggctttcagt ccatggacaa ctacaggcca ttcgatgagc 5041 tgatatacag tcagaactcg gtgggaaatc aaactcagcc ccagacgccg cagccagtga 5101 ggtctgcgaa ccgcagtcga agtgtgcgaa gaaccccaag cacttctacc aatcgggcgg 5161 ggactccatc cagtgcaacc ggaattccgg gacaaccttg cgatatgatt accaccaact 5221 atccctatgg aaaaccccat tgcttcagcc gaaaaccctg ctagatgaat gatatatata 5281 tatgtaaatt ggttttaaaa