Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii meduse (mdu), mRNA.


LOCUS       XM_017149870            2316 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017149870
VERSION     XM_017149870.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017149870.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2316
                     /gene="mdu"
                     /note="meduse; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:108062970"
     CDS             344..1786
                     /gene="mdu"
                     /codon_start=1
                     /product="probable serine/threonine-protein kinase cdc7"
                     /protein_id="XP_017005359.2"
                     /db_xref="GeneID:108062970"
                     /translation="MQQKVEEKIDPLTRIQEEIKEVVRREEEYRQLATLSSGTPTITS
                     PSSGQLVDFETYTVNGNGLDFETKLEQDEELLAENQNQNQIQDQGVLVTAQPAAVQTT
                     SLLLPIDELSNTPSLASSVNSAKEESLDGQHSDDSGISASSQTTKTTSTNVVKQSQQQ
                     QQQLKLTVVTRQEQRYIGPNCYNLTPEPPQQKLITRTISTPQLSGLPQKRQFAFGGAT
                     KGVMQRFIASHGKLAPTSPLPNASSPLTLNLAANGNGIGNGLTNGQNNNQSNSNNNNN
                     TLKLNTRTAMAFLESGGSAGGITSVTLSPAAIERDSEGRPLRRGYVPVEQKIQRELQD
                     LKSRESELKRLRKINRQNTLKASLDKLQFSTDDEVDADDDDEDSEVEHCYGPGKLRNA
                     QSTQELDRNGNEQEIQVHKPSGNRSLNAAAYIANGLSNGNGNGMRPAMSLAQLCDLTP
                     EEAPSSRGLIAQWESLIKKNAEVGAVEAII"
     polyA_site      2316
                     /gene="mdu"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gattgctctg cgtgctggtc gctcctccaa acctccaagt ctccgactct acgatcctac
       61 gatcctacgt ttcttcgcgg ctactccaac tcgcagtcat tcgtctgttc gattgtttgt
      121 tttcttcgct gcactttttg cgcgcgcgca accgccgata aacagcgaaa aaccaggaga
      181 aaaactgcaa taaacactgg aagtgcattt ttaacattta aaacgactct gtgaatgtgt
      241 cttgattgaa acatttactt tcgttttttt tttttgcaaa ttttgttctg ttaagtgtta
      301 aaaactccat ttgaagcgca cggaaaataa actttttagc aaaatgcagc agaaagttga
      361 agagaaaatc gatcccctga cacgcatcca ggaggagatc aaggaggtgg tgcggcgcga
      421 ggaggagtac cgccagctgg cgacgctctc gtctggcacc cccaccatca cttccccctc
      481 ctcggggcag ctggtggact tcgagacata cacggtcaat ggcaatggcc ttgactttga
      541 gacgaaactg gagcaggacg aggagctgct ggccgagaat cagaatcaga accagattca
      601 ggatcaggga gtgctggtca ccgcccaacc ggcggccgtg cagaccacct cgctgctgct
      661 gcccatcgac gagctgtcca acacaccgtc gctggcctcc agcgtgaaca gcgccaagga
      721 ggagagcctc gatggccagc actcggacga ctcgggcatc tcggcctcct cgcagacaac
      781 gaaaacgacc tcgaccaatg tggttaagca gtcgcagcag cagcagcagc agctcaagct
      841 gaccgtggtg acgcgccagg agcagcgcta cattgggccc aattgctata acctcacgcc
      901 cgagccgccg caacagaagc tgatcacccg caccatatcg acgccccagc tgagtggtct
      961 gccccagaag cgtcagttcg cctttggggg cgccaccaag ggagtgatgc agcgctttat
     1021 agcctcgcac ggcaagctgg cgcccaccag cccgctgcca aacgcctcct ccccgttgac
     1081 cctgaacttg gcggccaatg gaaatggtat tggaaatggt cttacaaatg gccagaacaa
     1141 taaccagagc aacagcaaca acaacaacaa caccctcaag ctgaacaccc gcactgcaat
     1201 ggccttcttg gaatcgggcg gctcagcggg cggcatcacc tcggtcaccc tctcgccggc
     1261 ggccatcgaa cgcgactcgg agggaaggcc cctgcgacgc ggctatgtgc ccgtcgagca
     1321 gaagatccag cgcgagctgc aggacctcaa gtcacgcgaa tcggagctga agcgactgcg
     1381 caagatcaac aggcagaaca ccctgaaggc ctccctggat aagctgcaat tcagcacaga
     1441 cgacgaggtc gatgcggatg acgatgacga ggactccgag gtggagcact gctacggacc
     1501 cggaaaactg cgcaacgccc agtccacaca ggagctggac aggaatggaa acgagcagga
     1561 gatccaggtc cacaagccct ccggcaatcg cagtctgaac gcagccgcct acatagccaa
     1621 cggcctcagc aatgggaatg gcaacggaat gcgtccggcg atgtcgctgg cccagctctg
     1681 cgatctgacg cccgaggagg caccctcctc gcggggactc atcgcccagt gggagagtct
     1741 gatcaagaag aacgccgagg ttggggcggt cgaggcgatc atttaaggat tgtgggtccg
     1801 gaaccccttt aaaaatatta acaaaaacaa cacacacaca ccaacgatct ggtgcagagc
     1861 agaccaaatt attattgtag tgtccacact tacacacttg atcctccgtt tctccaacac
     1921 cacgtccacg tccacgtcca cgtccacgtc ctcgtcctcg tccttctcgt cctcgccctt
     1981 cttcacctcc tgcgaaagct gcttatcaac gaattaatct taacgccaag caatggcaat
     2041 tgaaattata actgaattga attgcctgta cttaaagcga tttatgtgta atttattatg
     2101 tgtacgcgta cgtgaactgt tcgagaactc tgttgtatat atataattct tcgcgtttcc
     2161 agtgcgagtt cagtcgactt gcttataatt tattacaaat caattttata taaaccttat
     2221 ataaatatat ataaacaaaa tactatatgt acgaaaccaa tatgcgaaaa cgatttaata
     2281 aaataaagaa aaaacaaaaa aaaacttcaa taaaaa