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LOCUS XM_017149860 3418 bp mRNA linear INV 09-DEC-2024 transcript variant X5, mRNA. ACCESSION XM_017149860 VERSION XM_017149860.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017149860.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3418 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3418 /gene="Pkcdelta" /note="Protein kinase C delta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108062965" CDS 1057..3003 /gene="Pkcdelta" /codon_start=1 /product="putative protein kinase C delta type homolog isoform X3" /protein_id="XP_017005349.1" /db_xref="GeneID:108062965" /translation="MMFTRAQVRKQKTTNSSSQRPRSSGGSSSRHETRYKQSSTSSSG AGSGLSGSSGTSGARRDQYRDRDHYGKHSFELPRQHSKEEAYHRDRDRDRDRESSAGG AERGDRSGIGGNGGGVTGGGVYVDRRTRPRSITNRRGAIKHQKTHDINGHRFVAKFFR QPTFCAFCNLFLWGFGKQGYQCIICQTVVHKKCHEKLLGKCSGSVFTSASTILLRERF KIDMPHRFKPHTFMSPTFCDHCGSLMGGFFIQGLKCEECDVNCHKKCERLTANLCGVN QKLIVEALNHVKRGAREARDSPSTPPSLNPAYKIEANEEHDDDFHFLAVLGKGSFGKV LLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTES HLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNV LLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVL LYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQY SPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDK EILASMDQKQFHGFTYTNPHITLD" misc_feature 1489..1668 /gene="Pkcdelta" /note="first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt1; cd20834" /db_xref="CDD:410384" misc_feature order(1525..1545,1567..1581,1588..1590) /gene="Pkcdelta" /note="putative DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410384" misc_feature 1726..1875 /gene="Pkcdelta" /note="second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt2; cd20837" /db_xref="CDD:410387" misc_feature order(1741..1761,1783..1797,1804..1806) /gene="Pkcdelta" /note="DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410387" misc_feature 2026..2985 /gene="Pkcdelta" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature order(2032..2043,2050..2052,2056..2058,2095..2097, 2101..2103,2200..2202,2248..2259,2386..2388,2398..2403, 2407..2409,2437..2442) /gene="Pkcdelta" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270870" polyA_site 3418 /gene="Pkcdelta" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccctgtatat ataatatata tacatacatt attccttcat ctttttctgc tttttttgtt 61 gtttgtcgcg gcacacaaac aaaaatcgga caagtttgga aaatatggaa tgtgcaacgt 121 ggcgtatgcg tgatgcagcc aagtaaaagt gcgtggaaat atgcgcaaac gattttcttt 181 ttattttcaa gtgaaagtga ttctgtgaga gtgcaaaagt agagaaggga aaaatgaaaa 241 atggaaaata gtgcagattc tcgactttcc acacctgtgc acctggccaa aaaggctttc 301 ccctgggcat gacgtcacag ccatatagaa ctctatatat tctatactat ggatatatat 361 gtttctgtac ataaaagagg gaagagagaa ggctaaaaga acgctctggc aaccgcacaa 421 tcatacagtc aatttgcgct gtgtttttcg gggcattaaa acaaaagcat ttcactacga 481 aatatttatt atcgtgtgta cgaatgtgga atgtgtttat agtagcctcc aaaaagtcca 541 gcatcgaaaa cgcctttaac accacccacc caccacttcc ccattttctc tacattttcc 601 tctgtgtgtt tgccattcaa atagttttct ggacacgtgc taaaagctgg gatccttcga 661 tcactctgtt gaatccccct ctataaactg cttgtcatct ctgatggccc actcgataat 721 ccatcaacca aaacaactgg cagcggaaat aacaaaaacc aaaatggatc agcggtgtga 781 aatcagttca ttaacgaaat cgatcgtata tctgtcaacg gggctttaaa cctggccaac 841 agtcgcggca aagatgccag tacaccaaaa gcaggataca acatacagct gactaaaaat 901 gcgagctgtt tatttaatat aaatatatag aagaaaacgc cttgtactcg gcaaaagtcc 961 gctagcgaaa cacaaaccag aagcccgaaa tacttgcggg gagatcatat ctcgaatgtg 1021 gatgtgcatt tgggggtgga accgggagac cacaagatga tgttcacacg tgcccaggtg 1081 cgcaaacaga agaccaccaa ctcgagcagc cagcgacctc gcagctcggg aggatcatcg 1141 tcccgccacg agactcgcta caagcagagc tccaccagca gtagtggagc aggcagtggt 1201 ctgagtggca gcagcggcac ctcgggtgcc cggagggatc aataccggga cagggatcac 1261 tatggaaagc attccttcga gctgccgcgc cagcactcca aggaggaggc ctatcaccgg 1321 gatcgggaca gagatcggga tcgggagagt agtgccggcg gtgcagaaag gggcgatcga 1381 agtggcattg gtggcaacgg tggtggcgtt actggcggcg gcgtctatgt ggacaggaga 1441 acccgcccga ggagcattac caatcgtcgc ggggccatta agcaccagaa aacccacgac 1501 atcaatggcc atcgttttgt ggcgaaattc tttcgccagc ccaccttttg tgccttttgt 1561 aatttgtttc tttggggatt tggcaagcag ggctatcagt gcataatttg ccagacggtt 1621 gtgcataaaa agtgccatga aaagctgttg ggcaaatgtt ccggttccgt tttcacctcg 1681 gccagtacaa ttttactgcg cgaacgtttc aagatcgata tgccacatcg tttcaagccc 1741 cacactttta tgtcacccac tttttgtgac cattgcggat cgttgatggg gggatttttt 1801 attcagggcc ttaaatgtga agaatgtgac gtgaattgtc acaagaaatg cgagcggctc 1861 acggccaatt tatgcggtgt caatcagaaa ctcatcgtcg aggcactcaa ccacgtgaag 1921 cgaggagcca gagaagcccg tgactcgccc agtacaccgc ccagtttgaa tccagcctat 1981 aaaatcgagg ccaacgaaga acacgatgat gatttccact ttctggccgt tcttggcaaa 2041 ggaagttttg gcaaggttct gctggctgag ctgcgtgata ccacgtacta ctatgccatc 2101 aagtgcctga agaaggatgt cgtcctggag gacgacgatg tggactcgac gcttattgaa 2161 cgcaaggtcc tggcgctggg caccaaacat ccctatctgt gtcatctgtt ttgcaccttc 2221 caaacggaga gccacttgtt ctttgtgatg gagtatctaa atggcggtga tctcatgttc 2281 cacatccagg agagcggtcg cttttccgag gagcgggcca gattctatgg agccgaaata 2341 atctcgggcc tcaagttcct gcacaaaaag ggcattatct atagggatct caaactggat 2401 aatgtcctgc tggactacga gggacatgtg cgaattgccg actttggcat gtgcaaattg 2461 caaatctatt tggacaagac ggccgatagc ttttgcggca cacccgatta tatggcgccc 2521 gaaatcataa agggtgaaaa gtacaatcag aatgtggatt ggtggtcgtt cggtgtgctg 2581 ctctacgaaa tgctgatcgg acagtcacca ttcagtggct gcgatgagga cgagctcttc 2641 tggtccattt gcaatgaaat tccatggttc ccagtctata tatccgccga ggccaccgga 2701 atactcaagg ggttgctgga gaaggactat acgaagcgta ttggctcgca atatagtcca 2761 gctggtgata tagctgatca tatattcttc cgcccgatcg actggggatt actggaaaag 2821 cggcaaatcg aaccgccctt caagccccaa gtgaaacacc ccctggatac gcaatatttc 2881 gaccgggtct ttaccaggga gcgggtgcga ctcaccccca tcgataagga gatactagcc 2941 tccatggacc agaagcagtt ccacggcttc acctacacaa atcctcacat caccctggac 3001 taaatcttaa ttaatactat cctaattaat tatttagagc aacagtattt gtatatgtaa 3061 atatttatta tggaacaaaa aaaaaacaaa gattaacaaa cgaatatgga aaaggaaatc 3121 gaaattttaa taccttttag ctaagcctta aaacccactt aaaaatttga gcgtaattct 3181 agtcagttag ctttacttct atgtctaagt ctaattgtac agatatccct cctcatattt 3241 acctatatac tatataccta tgcatatata tctttttttt tcgcaaatta tatttgttct 3301 gaattttagc ggctaagcaa aaagtctacg tctatgagaa ataaaaaact aagaaattta 3361 aaaaaataat gcggctatgg aaaaatggtt gttgaataaa aacaatgtgt caatcaga