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LOCUS XM_017149858 3024 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_017149858 VERSION XM_017149858.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017149858.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3024 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3024 /gene="Pkcdelta" /note="Protein kinase C delta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108062965" CDS 573..2609 /gene="Pkcdelta" /codon_start=1 /product="putative protein kinase C delta type homolog isoform X2" /protein_id="XP_017005347.1" /db_xref="GeneID:108062965" /translation="MMFTRAQVRKQKTTNSSSQRPRSSGGSSSRHETRYKQSSTSSSG AGSGLSGSSGTSGARRDQYRDRDHYGKHSFELPRQHSKEEAYHRDRDRDRDRESSAGG AERGDRSGIGGNGGGVTGGGVYVDRRTRPRSITNRRGAIKHQKTHDINGHRFVAKFFR QPTFCAFCNLFLWGFGKQGYQCIICQTVVHKKCHEKLLGKCSGSVFTSASTILLRERF KIDMPHRFKPHTFMSPTFCDHCGSLMGGFFIQGLKCEECDVNCHKKCERLTANLCGVN QKLIVEALNHVKRGAREARDSPSTPPSLNPAYKIEANEEHDETSYTYSQFQKSGRFTA PATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDV DSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEER ARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADS FCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIP WFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPP FKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNPHITLD" misc_feature 1005..1184 /gene="Pkcdelta" /note="first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt1; cd20834" /db_xref="CDD:410384" misc_feature order(1041..1061,1083..1097,1104..1106) /gene="Pkcdelta" /note="putative DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410384" misc_feature 1242..1391 /gene="Pkcdelta" /note="second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt2; cd20837" /db_xref="CDD:410387" misc_feature order(1257..1277,1299..1313,1320..1322) /gene="Pkcdelta" /note="DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410387" misc_feature 1632..2591 /gene="Pkcdelta" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature order(1638..1649,1656..1658,1662..1664,1701..1703, 1707..1709,1806..1808,1854..1865,1992..1994,2004..2009, 2013..2015,2043..2048) /gene="Pkcdelta" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270870" polyA_site 3024 /gene="Pkcdelta" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcccgtgcga acgcagcggc caaacagagc ggaagaatcc gcgttgacgt tgtatctttg 61 tatctgacag atactcgaat ctatttatta ttactttctg cggctggcct tttgtattgt 121 tccacgttgt tgccatttcg ttttctggac acgtgctaaa agctgggatc cttcgatcac 181 tctgttgaat ccccctctat aaactgcttg tcatctctga tggcccactc gataatccat 241 caaccaaaac aactggcagc ggaaataaca aaaaccaaaa tggatcagcg gtgtgaaatc 301 agttcattaa cgaaatcgat cgtatatctg tcaacggggc tttaaacctg gccaacagtc 361 gcggcaaaga tgccagtaca ccaaaagcag gatacaacat acagctgact aaaaatgcga 421 gctgtttatt taatataaat atatagaaga aaacgccttg tactcggcaa aagtccgcta 481 gcgaaacaca aaccagaagc ccgaaatact tgcggggaga tcatatctcg aatgtggatg 541 tgcatttggg ggtggaaccg ggagaccaca agatgatgtt cacacgtgcc caggtgcgca 601 aacagaagac caccaactcg agcagccagc gacctcgcag ctcgggagga tcatcgtccc 661 gccacgagac tcgctacaag cagagctcca ccagcagtag tggagcaggc agtggtctga 721 gtggcagcag cggcacctcg ggtgcccgga gggatcaata ccgggacagg gatcactatg 781 gaaagcattc cttcgagctg ccgcgccagc actccaagga ggaggcctat caccgggatc 841 gggacagaga tcgggatcgg gagagtagtg ccggcggtgc agaaaggggc gatcgaagtg 901 gcattggtgg caacggtggt ggcgttactg gcggcggcgt ctatgtggac aggagaaccc 961 gcccgaggag cattaccaat cgtcgcgggg ccattaagca ccagaaaacc cacgacatca 1021 atggccatcg ttttgtggcg aaattctttc gccagcccac cttttgtgcc ttttgtaatt 1081 tgtttctttg gggatttggc aagcagggct atcagtgcat aatttgccag acggttgtgc 1141 ataaaaagtg ccatgaaaag ctgttgggca aatgttccgg ttccgttttc acctcggcca 1201 gtacaatttt actgcgcgaa cgtttcaaga tcgatatgcc acatcgtttc aagccccaca 1261 cttttatgtc acccactttt tgtgaccatt gcggatcgtt gatgggggga ttttttattc 1321 agggccttaa atgtgaagaa tgtgacgtga attgtcacaa gaaatgcgag cggctcacgg 1381 ccaatttatg cggtgtcaat cagaaactca tcgtcgaggc actcaaccac gtgaagcgag 1441 gagccagaga agcccgtgac tcgcccagta caccgcccag tttgaatcca gcctataaaa 1501 tcgaggccaa cgaagaacac gatgaaacat catatacata ttcacaattc caaaaatccg 1561 gacgtttcac tgcgccagca acagtaatac ctagatttaa gaattattcg gtagatgatt 1621 tccactttct ggccgttctt ggcaaaggaa gttttggcaa ggttctgctg gctgagctgc 1681 gtgataccac gtactactat gccatcaagt gcctgaagaa ggatgtcgtc ctggaggacg 1741 acgatgtgga ctcgacgctt attgaacgca aggtcctggc gctgggcacc aaacatccct 1801 atctgtgtca tctgttttgc accttccaaa cggagagcca cttgttcttt gtgatggagt 1861 atctaaatgg cggtgatctc atgttccaca tccaggagag cggtcgcttt tccgaggagc 1921 gggccagatt ctatggagcc gaaataatct cgggcctcaa gttcctgcac aaaaagggca 1981 ttatctatag ggatctcaaa ctggataatg tcctgctgga ctacgaggga catgtgcgaa 2041 ttgccgactt tggcatgtgc aaattgcaaa tctatttgga caagacggcc gatagctttt 2101 gcggcacacc cgattatatg gcgcccgaaa tcataaaggg tgaaaagtac aatcagaatg 2161 tggattggtg gtcgttcggt gtgctgctct acgaaatgct gatcggacag tcaccattca 2221 gtggctgcga tgaggacgag ctcttctggt ccatttgcaa tgaaattcca tggttcccag 2281 tctatatatc cgccgaggcc accggaatac tcaaggggtt gctggagaag gactatacga 2341 agcgtattgg ctcgcaatat agtccagctg gtgatatagc tgatcatata ttcttccgcc 2401 cgatcgactg gggattactg gaaaagcggc aaatcgaacc gcccttcaag ccccaagtga 2461 aacaccccct ggatacgcaa tatttcgacc gggtctttac cagggagcgg gtgcgactca 2521 cccccatcga taaggagata ctagcctcca tggaccagaa gcagttccac ggcttcacct 2581 acacaaatcc tcacatcacc ctggactaaa tcttaattaa tactatccta attaattatt 2641 tagagcaaca gtatttgtat atgtaaatat ttattatgga acaaaaaaaa aacaaagatt 2701 aacaaacgaa tatggaaaag gaaatcgaaa ttttaatacc ttttagctaa gccttaaaac 2761 ccacttaaaa atttgagcgt aattctagtc agttagcttt acttctatgt ctaagtctaa 2821 ttgtacagat atccctcctc atatttacct atatactata tacctatgca tatatatctt 2881 tttttttcgc aaattatatt tgttctgaat tttagcggct aagcaaaaag tctacgtcta 2941 tgagaaataa aaaactaaga aatttaaaaa aataatgcgg ctatggaaaa atggttgttg 3001 aataaaaaca atgtgtcaat caga