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LOCUS XM_017149856 2915 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017149856 VERSION XM_017149856.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017149856.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2915 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2915 /gene="Pkcdelta" /note="Protein kinase C delta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108062965" CDS 464..2500 /gene="Pkcdelta" /codon_start=1 /product="putative protein kinase C delta type homolog isoform X2" /protein_id="XP_017005345.1" /db_xref="GeneID:108062965" /translation="MMFTRAQVRKQKTTNSSSQRPRSSGGSSSRHETRYKQSSTSSSG AGSGLSGSSGTSGARRDQYRDRDHYGKHSFELPRQHSKEEAYHRDRDRDRDRESSAGG AERGDRSGIGGNGGGVTGGGVYVDRRTRPRSITNRRGAIKHQKTHDINGHRFVAKFFR QPTFCAFCNLFLWGFGKQGYQCIICQTVVHKKCHEKLLGKCSGSVFTSASTILLRERF KIDMPHRFKPHTFMSPTFCDHCGSLMGGFFIQGLKCEECDVNCHKKCERLTANLCGVN QKLIVEALNHVKRGAREARDSPSTPPSLNPAYKIEANEEHDETSYTYSQFQKSGRFTA PATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDV DSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEER ARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADS FCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIP WFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPP FKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNPHITLD" misc_feature 896..1075 /gene="Pkcdelta" /note="first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt1; cd20834" /db_xref="CDD:410384" misc_feature order(932..952,974..988,995..997) /gene="Pkcdelta" /note="putative DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410384" misc_feature 1133..1282 /gene="Pkcdelta" /note="second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) theta, delta, and similar proteins; Region: C1_nPKC_theta-like_rpt2; cd20837" /db_xref="CDD:410387" misc_feature order(1148..1168,1190..1204,1211..1213) /gene="Pkcdelta" /note="DAG/PE binding site [chemical binding]; other site" /db_xref="CDD:410387" misc_feature 1523..2482 /gene="Pkcdelta" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature order(1529..1540,1547..1549,1553..1555,1592..1594, 1598..1600,1697..1699,1745..1756,1883..1885,1895..1900, 1904..1906,1934..1939) /gene="Pkcdelta" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270870" polyA_site 2915 /gene="Pkcdelta" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attttcctct gtgtgtttgc cattcaaata gttttctgga cacgtgctaa aagctgggat 61 ccttcgatca ctctgttgaa tccccctcta taaactgctt gtcatctctg atggcccact 121 cgataatcca tcaaccaaaa caactggcag cggaaataac aaaaaccaaa atggatcagc 181 ggtgtgaaat cagttcatta acgaaatcga tcgtatatct gtcaacgggg ctttaaacct 241 ggccaacagt cgcggcaaag atgccagtac accaaaagca ggatacaaca tacagctgac 301 taaaaatgcg agctgtttat ttaatataaa tatatagaag aaaacgcctt gtactcggca 361 aaagtccgct agcgaaacac aaaccagaag cccgaaatac ttgcggggag atcatatctc 421 gaatgtggat gtgcatttgg gggtggaacc gggagaccac aagatgatgt tcacacgtgc 481 ccaggtgcgc aaacagaaga ccaccaactc gagcagccag cgacctcgca gctcgggagg 541 atcatcgtcc cgccacgaga ctcgctacaa gcagagctcc accagcagta gtggagcagg 601 cagtggtctg agtggcagca gcggcacctc gggtgcccgg agggatcaat accgggacag 661 ggatcactat ggaaagcatt ccttcgagct gccgcgccag cactccaagg aggaggccta 721 tcaccgggat cgggacagag atcgggatcg ggagagtagt gccggcggtg cagaaagggg 781 cgatcgaagt ggcattggtg gcaacggtgg tggcgttact ggcggcggcg tctatgtgga 841 caggagaacc cgcccgagga gcattaccaa tcgtcgcggg gccattaagc accagaaaac 901 ccacgacatc aatggccatc gttttgtggc gaaattcttt cgccagccca ccttttgtgc 961 cttttgtaat ttgtttcttt ggggatttgg caagcagggc tatcagtgca taatttgcca 1021 gacggttgtg cataaaaagt gccatgaaaa gctgttgggc aaatgttccg gttccgtttt 1081 cacctcggcc agtacaattt tactgcgcga acgtttcaag atcgatatgc cacatcgttt 1141 caagccccac acttttatgt cacccacttt ttgtgaccat tgcggatcgt tgatgggggg 1201 attttttatt cagggcctta aatgtgaaga atgtgacgtg aattgtcaca agaaatgcga 1261 gcggctcacg gccaatttat gcggtgtcaa tcagaaactc atcgtcgagg cactcaacca 1321 cgtgaagcga ggagccagag aagcccgtga ctcgcccagt acaccgccca gtttgaatcc 1381 agcctataaa atcgaggcca acgaagaaca cgatgaaaca tcatatacat attcacaatt 1441 ccaaaaatcc ggacgtttca ctgcgccagc aacagtaata cctagattta agaattattc 1501 ggtagatgat ttccactttc tggccgttct tggcaaagga agttttggca aggttctgct 1561 ggctgagctg cgtgatacca cgtactacta tgccatcaag tgcctgaaga aggatgtcgt 1621 cctggaggac gacgatgtgg actcgacgct tattgaacgc aaggtcctgg cgctgggcac 1681 caaacatccc tatctgtgtc atctgttttg caccttccaa acggagagcc acttgttctt 1741 tgtgatggag tatctaaatg gcggtgatct catgttccac atccaggaga gcggtcgctt 1801 ttccgaggag cgggccagat tctatggagc cgaaataatc tcgggcctca agttcctgca 1861 caaaaagggc attatctata gggatctcaa actggataat gtcctgctgg actacgaggg 1921 acatgtgcga attgccgact ttggcatgtg caaattgcaa atctatttgg acaagacggc 1981 cgatagcttt tgcggcacac ccgattatat ggcgcccgaa atcataaagg gtgaaaagta 2041 caatcagaat gtggattggt ggtcgttcgg tgtgctgctc tacgaaatgc tgatcggaca 2101 gtcaccattc agtggctgcg atgaggacga gctcttctgg tccatttgca atgaaattcc 2161 atggttccca gtctatatat ccgccgaggc caccggaata ctcaaggggt tgctggagaa 2221 ggactatacg aagcgtattg gctcgcaata tagtccagct ggtgatatag ctgatcatat 2281 attcttccgc ccgatcgact ggggattact ggaaaagcgg caaatcgaac cgcccttcaa 2341 gccccaagtg aaacaccccc tggatacgca atatttcgac cgggtcttta ccagggagcg 2401 ggtgcgactc acccccatcg ataaggagat actagcctcc atggaccaga agcagttcca 2461 cggcttcacc tacacaaatc ctcacatcac cctggactaa atcttaatta atactatcct 2521 aattaattat ttagagcaac agtatttgta tatgtaaata tttattatgg aacaaaaaaa 2581 aaacaaagat taacaaacga atatggaaaa ggaaatcgaa attttaatac cttttagcta 2641 agccttaaaa cccacttaaa aatttgagcg taattctagt cagttagctt tacttctatg 2701 tctaagtcta attgtacaga tatccctcct catatttacc tatatactat atacctatgc 2761 atatatatct ttttttttcg caaattatat ttgttctgaa ttttagcggc taagcaaaaa 2821 gtctacgtct atgagaaata aaaaactaag aaatttaaaa aaataatgcg gctatggaaa 2881 aatggttgtt gaataaaaac aatgtgtcaa tcaga